RNA–Protein interactions for RNA: ENST00000586253.1

SMAD4-204, Transcript of SMAD family member 4, humanhuman

TSL 3

Gene SMAD4, Length 784 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-204ENST00000586253 INO80B-WBP1J3KQ70 363 aa8.84□□□□□ -0.99
SMAD4-204ENST00000586253 POLR2DO15514 142 aaKnown RBP8.84□□□□□ -0.99
SMAD4-204ENST00000586253 CSDE1O75534 798 aaKnown RBP8.84□□□□□ -0.99
SMAD4-204ENST00000586253 ERLIN2O94905 339 aa8.84□□□□□ -0.99
SMAD4-204ENST00000586253 GJB5O95377 273 aa8.84□□□□□ -0.99
SMAD4-204ENST00000586253 KRT18P05783 430 aaKnown RBP8.84□□□□□ -0.99
SMAD4-204ENST00000586253 ABCD1P33897 745 aa8.84□□□□□ -0.99
SMAD4-204ENST00000586253 NPTX2P47972 431 aa8.84□□□□□ -0.99
SMAD4-204ENST00000586253 SARSP49591 514 aaKnown RBP8.84□□□□□ -0.99
SMAD4-204ENST00000586253 SMTNP53814 917 aa8.84□□□□□ -0.99
SMAD4-204ENST00000586253 PEX3P56589 373 aa8.84□□□□□ -0.99
SMAD4-204ENST00000586253 DEFB103AP81534 67 aa8.84□□□□□ -0.99
SMAD4-204ENST00000586253 INSM1Q01101 510 aaPredicted RBP8.84□□□□□ -0.99
SMAD4-204ENST00000586253 AMPD3Q01432 767 aa8.84□□□□□ -0.99
SMAD4-204ENST00000586253 NCBP1Q09161 790 aaKnown RBP8.84□□□□□ -0.99
SMAD4-204ENST00000586253 GIT2Q14161 759 aa8.84□□□□□ -0.99
SMAD4-204ENST00000586253 RAB30Q15771 203 aa8.84□□□□□ -0.99
SMAD4-204ENST00000586253 MAPK6Q16659 721 aa8.84□□□□□ -0.99
SMAD4-204ENST00000586253 CNNM4Q6P4Q7 775 aa8.84□□□□□ -0.99
SMAD4-204ENST00000586253 LIN28BQ6ZN17 250 aaKnown RBP eCLIP8.84□□□□□ -0.99
SMAD4-204ENST00000586253 SLC24A5Q71RS6 500 aa8.84□□□□□ -0.99
SMAD4-204ENST00000586253 HERC6Q8IVU3 1022 aa8.84□□□□□ -0.99
SMAD4-204ENST00000586253 PDILTQ8N807 584 aa8.84□□□□□ -0.99
SMAD4-204ENST00000586253 SLC17A8Q8NDX2 589 aa8.84□□□□□ -0.99
SMAD4-204ENST00000586253 DEPTORQ8TB45 409 aa8.84□□□□□ -0.99
SMAD4-204ENST00000586253 LINC01599Q8WXQ3 324 aa8.84□□□□□ -0.99
SMAD4-204ENST00000586253 CCDC51Q96ER9 411 aa8.84□□□□□ -0.99
SMAD4-204ENST00000586253 ADAM2Q99965 735 aa8.84□□□□□ -0.99
SMAD4-204ENST00000586253 REEP2Q9BRK0 252 aa8.84□□□□□ -0.99
SMAD4-204ENST00000586253 PANK2Q9BZ23 570 aa8.84□□□□□ -0.99
SMAD4-204ENST00000586253 FZD8Q9H461 694 aa8.84□□□□□ -0.99
SMAD4-204ENST00000586253 MINDY3Q9H8M7 445 aa8.84□□□□□ -0.99
SMAD4-204ENST00000586253 PARVGQ9HBI0 331 aa8.84□□□□□ -0.99
SMAD4-204ENST00000586253 GDPD2Q9HCC8 539 aa8.84□□□□□ -0.99
SMAD4-204ENST00000586253 EVA1BQ9NVM1 165 aa8.84□□□□□ -0.99
SMAD4-204ENST00000586253 PRMT7Q9NVM4 692 aaPredicted RBP8.84□□□□□ -0.99
SMAD4-204ENST00000586253 ARHGAP28Q9P2N2 729 aa8.84□□□□□ -0.99
SMAD4-204ENST00000586253 HPSEQ9Y251 543 aa8.84□□□□□ -0.99
SMAD4-204ENST00000586253 COL4A6Q14031 1691 aa8.84□□□□□ -0.99
SMAD4-204ENST00000586253 TMEM265A0A087WTH1 108 aa8.83□□□□□ -1
SMAD4-204ENST00000586253 FRMD3A2A2Y4 597 aa8.83□□□□□ -1
SMAD4-204ENST00000586253 GOLGA6L4A6NEF3 574 aa8.83□□□□□ -1
SMAD4-204ENST00000586253 MYMKA6NI61 221 aa8.83□□□□□ -1
SMAD4-204ENST00000586253 C9IYK1 514 aa8.83□□□□□ -1
SMAD4-204ENST00000586253 ACKR2O00590 384 aa8.83□□□□□ -1
SMAD4-204ENST00000586253 MGEA5O60502 916 aa8.83□□□□□ -1
SMAD4-204ENST00000586253 TSPAN1O60635 241 aa8.83□□□□□ -1
SMAD4-204ENST00000586253 LILRB3O75022 631 aa8.83□□□□□ -1
SMAD4-204ENST00000586253 TBCAO75347 108 aaKnown RBP8.83□□□□□ -1
SMAD4-204ENST00000586253 FAM13AO94988 1023 aa8.83□□□□□ -1
SMAD4-204ENST00000586253 CCNYL3P0C7X3 344 aa8.83□□□□□ -1
SMAD4-204ENST00000586253 STAG3L1P0CL83 205 aa8.83□□□□□ -1
SMAD4-204ENST00000586253 SKIP12755 728 aa8.83□□□□□ -1
SMAD4-204ENST00000586253 BMP1P13497 986 aa8.83□□□□□ -1
SMAD4-204ENST00000586253 PFKFB1P16118 471 aa8.83□□□□□ -1
SMAD4-204ENST00000586253 NDUFV2P19404 249 aa8.83□□□□□ -1
SMAD4-204ENST00000586253 FGFR4P22455 802 aa8.83□□□□□ -1
SMAD4-204ENST00000586253 HOXA11P31270 313 aaPredicted RBP8.83□□□□□ -1
SMAD4-204ENST00000586253 RAB27AP51159 221 aa8.83□□□□□ -1
SMAD4-204ENST00000586253 FAM189BP81408 668 aa8.83□□□□□ -1
SMAD4-204ENST00000586253 RAD51AP2Q09MP3 1159 aa8.83□□□□□ -1
SMAD4-204ENST00000586253 DHX8Q14562 1220 aaKnown RBP8.83□□□□□ -1
SMAD4-204ENST00000586253 FAM109BQ6ICB4 259 aaPredicted RBP8.83□□□□□ -1
SMAD4-204ENST00000586253 NOTUMQ6P988 496 aa8.83□□□□□ -1
SMAD4-204ENST00000586253 RTN4RL1Q86UN2 441 aaPredicted RBP8.83□□□□□ -1
SMAD4-204ENST00000586253 NPAS4Q8IUM7 802 aa8.83□□□□□ -1
SMAD4-204ENST00000586253 MYOCDQ8IZQ8 938 aa8.83□□□□□ -1
SMAD4-204ENST00000586253 TMEM87AQ8NBN3 555 aa8.83□□□□□ -1
SMAD4-204ENST00000586253 RSPH1Q8WYR4 309 aa8.83□□□□□ -1
SMAD4-204ENST00000586253 MRPS27Q92552 414 aaKnown RBP8.83□□□□□ -1
SMAD4-204ENST00000586253 DHX58Q96C10 678 aa8.83□□□□□ -1
SMAD4-204ENST00000586253 DNAJC19Q96DA6 116 aa8.83□□□□□ -1
SMAD4-204ENST00000586253 CCDC113Q9H0I3 377 aa8.83□□□□□ -1
SMAD4-204ENST00000586253 ELAC1Q9H777 363 aaKnown RBP8.83□□□□□ -1
SMAD4-204ENST00000586253 KMT5AQ9NQR1 393 aa8.83□□□□□ -1
SMAD4-204ENST00000586253 SEL1LQ9UBV2 794 aa8.83□□□□□ -1
SMAD4-204ENST00000586253 MSRAQ9UJ68 235 aa8.83□□□□□ -1
SMAD4-204ENST00000586253 PIN4Q9Y237 131 aaKnown RBP8.83□□□□□ -1
SMAD4-204ENST00000586253 PCDHA11Q9Y5I1 949 aa8.83□□□□□ -1
SMAD4-204ENST00000586253 ADGRA3Q8IWK6 1321 aa8.82□□□□□ -1
SMAD4-204ENST00000586253 CNTNAP2Q9UHC6 1331 aa8.82□□□□□ -1
SMAD4-204ENST00000586253 NPHP3-ACAD11A0A0J9YXS1 232 aa8.82□□□□□ -1
SMAD4-204ENST00000586253 A0A0U1RQF3 1178 aa8.82□□□□□ -1
SMAD4-204ENST00000586253 A0A1B0GUA9 196 aa8.82□□□□□ -1
SMAD4-204ENST00000586253 A0A1B0GVL5 298 aa8.82□□□□□ -1
SMAD4-204ENST00000586253 CCDC169A6NNP5 214 aa8.82□□□□□ -1
SMAD4-204ENST00000586253 K7ERI5 159 aa8.82□□□□□ -1
SMAD4-204ENST00000586253 ZNF623O75123 536 aa8.82□□□□□ -1
SMAD4-204ENST00000586253 EOMESO95936 686 aa8.82□□□□□ -1
SMAD4-204ENST00000586253 MYL1P05976 194 aa8.82□□□□□ -1
SMAD4-204ENST00000586253 SLFN14P0C7P3 912 aa8.82□□□□□ -1
SMAD4-204ENST00000586253 MAPTP10636 758 aaKnown RBP8.82□□□□□ -1
SMAD4-204ENST00000586253 GAP43P17677 238 aa8.82□□□□□ -1
SMAD4-204ENST00000586253 ARF4P18085 180 aaPredicted RBP8.82□□□□□ -1
SMAD4-204ENST00000586253 SYKP43405 635 aa8.82□□□□□ -1
SMAD4-204ENST00000586253 NCKAP1LP55160 1127 aa8.82□□□□□ -1
SMAD4-204ENST00000586253 HTRA4P83105 476 aaPredicted RBP8.82□□□□□ -1
SMAD4-204ENST00000586253 QPCTQ16769 361 aa8.82□□□□□ -1
SMAD4-204ENST00000586253 PTPRNQ16849 979 aa8.82□□□□□ -1
SMAD4-204ENST00000586253 TWF2Q6IBS0 349 aaKnown RBP8.82□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms