RNA–Protein interactions for RNA: ENST00000585428.1

SDF2-202, Transcript of stromal cell derived factor 2, humanhuman

TSL 1 (best)

Gene SDF2, Length 924 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF2-202ENST00000585428 A0A1B0GUA9 196 aa16.1■□□□□ 0.17
SDF2-202ENST00000585428 SPDYE4A6NLX3 237 aa16.1■□□□□ 0.17
SDF2-202ENST00000585428 NARSO43776 548 aaKnown RBP16.1■□□□□ 0.17
SDF2-202ENST00000585428 RFPL2O75678 378 aa16.1■□□□□ 0.17
SDF2-202ENST00000585428 FDPSP14324 419 aaKnown RBP16.1■□□□□ 0.17
SDF2-202ENST00000585428 ARF4P18085 180 aaPredicted RBP16.1■□□□□ 0.17
SDF2-202ENST00000585428 MLH1P40692 756 aa16.1■□□□□ 0.17
SDF2-202ENST00000585428 SCNN1GP51170 649 aa16.1■□□□□ 0.17
SDF2-202ENST00000585428 MBTD1Q05BQ5 628 aa16.1■□□□□ 0.17
SDF2-202ENST00000585428 POTEGQ6S5H5 508 aa16.1■□□□□ 0.17
SDF2-202ENST00000585428 CCDC105Q8IYK2 499 aa16.1■□□□□ 0.17
SDF2-202ENST00000585428 RSAD2Q8WXG1 361 aa16.1■□□□□ 0.17
SDF2-202ENST00000585428 NXPE3Q969Y0 559 aa16.1■□□□□ 0.17
SDF2-202ENST00000585428 COLEC11Q9BWP8 271 aa16.1■□□□□ 0.17
SDF2-202ENST00000585428 GPR62Q9BZJ7 368 aa16.1■□□□□ 0.17
SDF2-202ENST00000585428 NT5C3AQ9H0P0 336 aa16.1■□□□□ 0.17
SDF2-202ENST00000585428 PLEKHA4Q9H4M7 779 aa16.1■□□□□ 0.17
SDF2-202ENST00000585428 PCDHA12Q9UN75 941 aa16.1■□□□□ 0.17
SDF2-202ENST00000585428 CACNA1HO95180 2353 aa16.1■□□□□ 0.17
SDF2-202ENST00000585428 DMDP11532 3685 aa16.1■□□□□ 0.17
SDF2-202ENST00000585428 FAM205CA6NFA0 338 aa16.09■□□□□ 0.17
SDF2-202ENST00000585428 INO80B-WBP1J3KQ70 363 aa16.09■□□□□ 0.17
SDF2-202ENST00000585428 NR1I2O75469 434 aa16.09■□□□□ 0.17
SDF2-202ENST00000585428 DGAT1O75907 488 aa16.09■□□□□ 0.17
SDF2-202ENST00000585428 GLUD1P00367 558 aa16.09■□□□□ 0.17
SDF2-202ENST00000585428 SPATA31D3P0C874 917 aa16.09■□□□□ 0.17
SDF2-202ENST00000585428 XRCC6P12956 609 aaKnown RBP eCLIP16.09■□□□□ 0.17
SDF2-202ENST00000585428 NR5A1Q13285 461 aa16.09■□□□□ 0.17
SDF2-202ENST00000585428 CAPSQ13938 189 aa16.09■□□□□ 0.17
SDF2-202ENST00000585428 TFDP1Q14186 410 aa16.09■□□□□ 0.17
SDF2-202ENST00000585428 SPATA31D4Q6ZUB0 917 aa16.09■□□□□ 0.17
SDF2-202ENST00000585428 FRMD5Q7Z6J6 570 aa16.09■□□□□ 0.17
SDF2-202ENST00000585428 PALB2Q86YC2 1186 aa16.09■□□□□ 0.17
SDF2-202ENST00000585428 SIX5Q8N196 739 aa16.09■□□□□ 0.17
SDF2-202ENST00000585428 ASAP3Q8TDY4 903 aa16.09■□□□□ 0.17
SDF2-202ENST00000585428 MYADMQ96S97 322 aa16.09■□□□□ 0.17
SDF2-202ENST00000585428 FNIP2Q9P278 1114 aa16.09■□□□□ 0.17
SDF2-202ENST00000585428 PLXNA3P51805 1871 aa16.08■□□□□ 0.17
SDF2-202ENST00000585428 KRBA1A5PL33 1030 aa16.08■□□□□ 0.16
SDF2-202ENST00000585428 TGM5O43548 720 aa16.08■□□□□ 0.16
SDF2-202ENST00000585428 MYBP10242 640 aa16.08■□□□□ 0.16
SDF2-202ENST00000585428 GLRA2P23416 452 aa16.08■□□□□ 0.16
SDF2-202ENST00000585428 AKAP5P24588 427 aa16.08■□□□□ 0.16
SDF2-202ENST00000585428 USP41Q3LFD5 358 aa16.08■□□□□ 0.16
SDF2-202ENST00000585428 ELMSAN1Q6PJG2 1045 aa16.08■□□□□ 0.16
SDF2-202ENST00000585428 DTWD2Q8NBA8 298 aa16.08■□□□□ 0.16
SDF2-202ENST00000585428 SMG7Q92540 1137 aaKnown RBP16.08■□□□□ 0.16
SDF2-202ENST00000585428 STAMQ92783 540 aa16.08■□□□□ 0.16
SDF2-202ENST00000585428 NKD2Q969F2 451 aaPredicted RBP16.08■□□□□ 0.16
SDF2-202ENST00000585428 NXF3Q9H4D5 531 aaKnown RBP16.08■□□□□ 0.16
SDF2-202ENST00000585428 TTC12Q9H892 705 aaPredicted RBP16.08■□□□□ 0.16
SDF2-202ENST00000585428 ZDHHC7Q9NXF8 308 aa16.08■□□□□ 0.16
SDF2-202ENST00000585428 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP16.08■□□□□ 0.164e-6■□□□□ 9
SDF2-202ENST00000585428 ORC3Q9UBD5 711 aaPredicted RBP16.08■□□□□ 0.16
SDF2-202ENST00000585428 FBXL21Q9UKT6 434 aa16.08■□□□□ 0.16
SDF2-202ENST00000585428 B4GALT5O43286 388 aa16.07■□□□□ 0.16
SDF2-202ENST00000585428 LAMP2P13473 410 aa16.07■□□□□ 0.16
SDF2-202ENST00000585428 GBP2P32456 591 aaPredicted RBP16.07■□□□□ 0.16
SDF2-202ENST00000585428 RARRES1P49788 294 aa16.07■□□□□ 0.16
SDF2-202ENST00000585428 ANGPT1Q15389 498 aa16.07■□□□□ 0.16
SDF2-202ENST00000585428 SLC27A1Q6PCB7 646 aa16.07■□□□□ 0.16
SDF2-202ENST00000585428 WASF1Q92558 559 aa16.07■□□□□ 0.16
SDF2-202ENST00000585428 B3GALT6Q96L58 329 aa16.07■□□□□ 0.16
SDF2-202ENST00000585428 MTMR9Q96QG7 549 aa16.07■□□□□ 0.16
SDF2-202ENST00000585428 APOL6Q9BWW8 343 aa16.07■□□□□ 0.16
SDF2-202ENST00000585428 PRKD2Q9BZL6 878 aa16.07■□□□□ 0.16
SDF2-202ENST00000585428 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP16.07■□□□□ 0.16
SDF2-202ENST00000585428 ADAM28Q9UKQ2 775 aa16.07■□□□□ 0.16
SDF2-202ENST00000585428 CLUHO75153 1309 aa16.07■□□□□ 0.16
SDF2-202ENST00000585428 A0A087WWV3 80 aa16.06■□□□□ 0.16
SDF2-202ENST00000585428 ANHXE9PGG2 379 aa16.06■□□□□ 0.16
SDF2-202ENST00000585428 CFHP08603 1231 aa16.06■□□□□ 0.16
SDF2-202ENST00000585428 KRT2P35908 639 aa16.06■□□□□ 0.16
SDF2-202ENST00000585428 FOXK2Q01167 660 aa16.06■□□□□ 0.16
SDF2-202ENST00000585428 CALCRLQ16602 461 aa16.06■□□□□ 0.16
SDF2-202ENST00000585428 FUT10Q6P4F1 479 aa16.06■□□□□ 0.16
SDF2-202ENST00000585428 CDR2LQ86X02 465 aaPredicted RBP16.06■□□□□ 0.16
SDF2-202ENST00000585428 HACE1Q8IYU2 909 aa16.06■□□□□ 0.16
SDF2-202ENST00000585428 PIGOQ8TEQ8 1089 aa16.06■□□□□ 0.16
SDF2-202ENST00000585428 RABGGTAQ92696 567 aa16.06■□□□□ 0.16
SDF2-202ENST00000585428 TRIM6Q9C030 488 aaPredicted RBP16.06■□□□□ 0.16
SDF2-202ENST00000585428 ZMYM2Q9UBW7 1377 aa16.05■□□□□ 0.16
SDF2-202ENST00000585428 BTBD18B2RXH4 712 aa16.05■□□□□ 0.16
SDF2-202ENST00000585428 WNT7AO00755 349 aa16.05■□□□□ 0.16
SDF2-202ENST00000585428 TADA2AO75478 443 aa16.05■□□□□ 0.16
SDF2-202ENST00000585428 NPTXRO95502 500 aa16.05■□□□□ 0.16
SDF2-202ENST00000585428 SPATA31C1P0DKV0 1188 aa16.05■□□□□ 0.16
SDF2-202ENST00000585428 SRFP11831 508 aa16.05■□□□□ 0.16
SDF2-202ENST00000585428 TXKP42681 527 aa16.05■□□□□ 0.16
SDF2-202ENST00000585428 PHLDB3Q6NSJ2 640 aa16.05■□□□□ 0.16
SDF2-202ENST00000585428 ADSSL1Q8N142 457 aa16.05■□□□□ 0.16
SDF2-202ENST00000585428 RIN2Q8WYP3 895 aaPredicted RBP16.05■□□□□ 0.16
SDF2-202ENST00000585428 FZD8Q9H461 694 aa16.05■□□□□ 0.16
SDF2-202ENST00000585428 KLK14Q9P0G3 267 aa16.05■□□□□ 0.16
SDF2-202ENST00000585428 DENND4AQ7Z401 1863 aa16.05■□□□□ 0.16
SDF2-202ENST00000585428 STK25O00506 426 aa16.04■□□□□ 0.16
SDF2-202ENST00000585428 ZMYND10O75800 440 aa16.04■□□□□ 0.16
SDF2-202ENST00000585428 RPL17P18621 184 aaKnown RBP16.04■□□□□ 0.16
SDF2-202ENST00000585428 GRIK3Q13003 919 aa16.04■□□□□ 0.16
SDF2-202ENST00000585428 FAM187BQ17R55 369 aa16.04■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms