RNA–Protein interactions for RNA: ENST00000585121.5

SS18-225, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 2

Gene SS18, Length 1,545 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-225ENST00000585121 TMEM173Q86WV6 379 aaPredicted RBP13.64□□□□□ -0.23
SS18-225ENST00000585121 RASSF8Q8NHQ8 419 aa13.64□□□□□ -0.23
SS18-225ENST00000585121 ZFP42Q96MM3 310 aa13.64□□□□□ -0.23
SS18-225ENST00000585121 EMILIN2Q9BXX0 1053 aa13.64□□□□□ -0.23
SS18-225ENST00000585121 CCDC113Q9H0I3 377 aa13.64□□□□□ -0.23
SS18-225ENST00000585121 PDZD7Q9H5P4 517 aa13.64□□□□□ -0.23
SS18-225ENST00000585121 KMT5AQ9NQR1 393 aa13.64□□□□□ -0.23
SS18-225ENST00000585121 SSX2IPQ9Y2D8 614 aa13.64□□□□□ -0.23
SS18-225ENST00000585121 PRG3Q9Y2Y8 225 aaPredicted RBP13.64□□□□□ -0.23
SS18-225ENST00000585121 IRAK3Q9Y616 596 aa13.64□□□□□ -0.23
SS18-225ENST00000585121 K7ELQ4 463 aaPredicted RBP13.63□□□□□ -0.23
SS18-225ENST00000585121 CLASP2O75122 1294 aaKnown RBP13.63□□□□□ -0.23
SS18-225ENST00000585121 ALADP13716 330 aa13.63□□□□□ -0.23
SS18-225ENST00000585121 GUCY2CP25092 1073 aa13.63□□□□□ -0.23
SS18-225ENST00000585121 LONP1P36776 959 aaKnown RBP13.63□□□□□ -0.23
SS18-225ENST00000585121 NPTX2P47972 431 aa13.63□□□□□ -0.23
SS18-225ENST00000585121 SMTNP53814 917 aa13.63□□□□□ -0.23
SS18-225ENST00000585121 GRIK3Q13003 919 aa13.63□□□□□ -0.23
SS18-225ENST00000585121 SF3A1Q15459 793 aaKnown RBP13.63□□□□□ -0.23
SS18-225ENST00000585121 ATF7IP2Q5U623 682 aa13.63□□□□□ -0.23
SS18-225ENST00000585121 C1orf186Q6ZWK4 172 aa13.63□□□□□ -0.23
SS18-225ENST00000585121 PPFIBP1Q86W92 1011 aa13.63□□□□□ -0.23
SS18-225ENST00000585121 COLGALT2Q8IYK4 626 aa13.63□□□□□ -0.23
SS18-225ENST00000585121 VN1R2Q8NFZ6 395 aa13.63□□□□□ -0.23
SS18-225ENST00000585121 BCL7CQ8WUZ0 217 aaPredicted RBP13.63□□□□□ -0.23
SS18-225ENST00000585121 AUTS2Q8WXX7 1259 aa13.63□□□□□ -0.23
SS18-225ENST00000585121 PLIN2Q99541 437 aa13.63□□□□□ -0.23
SS18-225ENST00000585121 KIFC3Q9BVG8 833 aa13.63□□□□□ -0.23
SS18-225ENST00000585121 RUSC1Q9BVN2 902 aa13.63□□□□□ -0.23
SS18-225ENST00000585121 MRPL17Q9NRX2 175 aaKnown RBP13.63□□□□□ -0.23
SS18-225ENST00000585121 MIOSQ9NXC5 875 aa13.63□□□□□ -0.23
SS18-225ENST00000585121 KCND2Q9NZV8 630 aa13.63□□□□□ -0.23
SS18-225ENST00000585121 KLK14Q9P0G3 267 aa13.63□□□□□ -0.23
SS18-225ENST00000585121 USP15Q9Y4E8 981 aaPredicted RBP13.63□□□□□ -0.23
SS18-225ENST00000585121 SPDYE4A6NLX3 237 aa13.62□□□□□ -0.23
SS18-225ENST00000585121 B4GALT3O60512 393 aa13.62□□□□□ -0.23
SS18-225ENST00000585121 URODP06132 367 aa13.62□□□□□ -0.23
SS18-225ENST00000585121 PLA2G4BP0C869 781 aa13.62□□□□□ -0.23
SS18-225ENST00000585121 RBM10P98175 930 aaKnown RBP13.62□□□□□ -0.23
SS18-225ENST00000585121 DSC1Q08554 894 aa13.62□□□□□ -0.23
SS18-225ENST00000585121 CES5AQ6NT32 575 aa13.62□□□□□ -0.23
SS18-225ENST00000585121 KCNK18Q7Z418 384 aa13.62□□□□□ -0.23
SS18-225ENST00000585121 SYT2Q8N9I0 419 aaPredicted RBP13.62□□□□□ -0.23
SS18-225ENST00000585121 PNMA5Q96PV4 448 aa13.62□□□□□ -0.23
SS18-225ENST00000585121 TMEM134Q9H6X4 195 aa13.62□□□□□ -0.23
SS18-225ENST00000585121 CD320Q9NPF0 282 aa13.62□□□□□ -0.23
SS18-225ENST00000585121 TSHZ2Q9NRE2 1034 aa13.62□□□□□ -0.23
SS18-225ENST00000585121 DZANK1Q9NVP4 752 aa13.62□□□□□ -0.23
SS18-225ENST00000585121 SNTG2Q9NY99 539 aa13.62□□□□□ -0.23
SS18-225ENST00000585121 HCFC2Q9Y5Z7 792 aa13.62□□□□□ -0.23
SS18-225ENST00000585121 C19orf67A6NJJ6 358 aa13.61□□□□□ -0.23
SS18-225ENST00000585121 PI4K2BG5E9Z4 385 aa13.61□□□□□ -0.23
SS18-225ENST00000585121 SOD2P04179 222 aa13.61□□□□□ -0.23
SS18-225ENST00000585121 SYT1P21579 422 aa13.61□□□□□ -0.23
SS18-225ENST00000585121 KLRC2P26717 231 aa13.61□□□□□ -0.23
SS18-225ENST00000585121 STRN3Q13033 797 aa13.61□□□□□ -0.23
SS18-225ENST00000585121 KCNC3Q14003 757 aa13.61□□□□□ -0.23
SS18-225ENST00000585121 PTPN14Q15678 1187 aa13.61□□□□□ -0.23
SS18-225ENST00000585121 TMEM119Q4V9L6 283 aa13.61□□□□□ -0.23
SS18-225ENST00000585121 NT5DC1Q5TFE4 455 aa13.61□□□□□ -0.23
SS18-225ENST00000585121 KIAA1841Q6NSI8 718 aa13.61□□□□□ -0.23
SS18-225ENST00000585121 HERC2P3Q9BVR0 1158 aa13.61□□□□□ -0.23
SS18-225ENST00000585121 PHF7Q9BWX1 381 aaPredicted RBP13.61□□□□□ -0.23
SS18-225ENST00000585121 MRPL4Q9BYD3 311 aaKnown RBP13.61□□□□□ -0.23
SS18-225ENST00000585121 EPHX3Q9H6B9 360 aa13.61□□□□□ -0.23
SS18-225ENST00000585121 GDAQ9Y2T3 454 aa13.61□□□□□ -0.23
SS18-225ENST00000585121 ATG2AQ2TAZ0 1938 aa13.61□□□□□ -0.23
SS18-225ENST00000585121 TTLL13PA6NNM8 815 aa13.6□□□□□ -0.23
SS18-225ENST00000585121 SFI1A8K8P3 1242 aa13.6□□□□□ -0.23
SS18-225ENST00000585121 H0YCG3 227 aa13.6□□□□□ -0.23
SS18-225ENST00000585121 TADA2AO75478 443 aa13.6□□□□□ -0.23
SS18-225ENST00000585121 RECQL4O94761 1208 aa13.6□□□□□ -0.23
SS18-225ENST00000585121 THP07101 528 aa13.6□□□□□ -0.23
SS18-225ENST00000585121 PLS3P13797 630 aa13.6□□□□□ -0.23
SS18-225ENST00000585121 YARSP54577 528 aaKnown RBP13.6□□□□□ -0.23
SS18-225ENST00000585121 SLC12A3P55017 1021 aa13.6□□□□□ -0.23
SS18-225ENST00000585121 ITIH3Q06033 890 aa13.6□□□□□ -0.23
SS18-225ENST00000585121 RAD51AP2Q09MP3 1159 aa13.6□□□□□ -0.23
SS18-225ENST00000585121 ELMSAN1Q6PJG2 1045 aa13.6□□□□□ -0.23
SS18-225ENST00000585121 DAW1Q8N136 415 aa13.6□□□□□ -0.23
SS18-225ENST00000585121 SPIRE2Q8WWL2 714 aa13.6□□□□□ -0.23
SS18-225ENST00000585121 TCHPQ9BT92 498 aa13.6□□□□□ -0.23
SS18-225ENST00000585121 VN1R3Q9BXE9 311 aa13.6□□□□□ -0.23
SS18-225ENST00000585121 FOXD4L1Q9NU39 408 aa13.6□□□□□ -0.23
SS18-225ENST00000585121 MARCH5Q9NX47 278 aa13.6□□□□□ -0.23
SS18-225ENST00000585121 TNFSF13BQ9Y275 285 aa13.6□□□□□ -0.23
SS18-225ENST00000585121 USP20Q9Y2K6 914 aa13.6□□□□□ -0.23
SS18-225ENST00000585121 C2CD2LO14523 706 aa13.59□□□□□ -0.23
SS18-225ENST00000585121 SLC16A4O15374 487 aa13.59□□□□□ -0.23
SS18-225ENST00000585121 DCXO43602 365 aa13.59□□□□□ -0.23
SS18-225ENST00000585121 KRT18P05783 430 aaKnown RBP13.59□□□□□ -0.23
SS18-225ENST00000585121 GLUD2P49448 558 aa13.59□□□□□ -0.23
SS18-225ENST00000585121 TUSC3Q13454 348 aa13.59□□□□□ -0.23
SS18-225ENST00000585121 CBX2Q14781 532 aaPredicted RBP13.59□□□□□ -0.23
SS18-225ENST00000585121 USP41Q3LFD5 358 aa13.59□□□□□ -0.23
SS18-225ENST00000585121 TMEM31Q5JXX7 168 aa13.59□□□□□ -0.23
SS18-225ENST00000585121 EEF1DP3Q658K8 133 aa13.59□□□□□ -0.23
SS18-225ENST00000585121 SYCE2Q6PIF2 218 aa13.59□□□□□ -0.23
SS18-225ENST00000585121 GSTCDQ8NEC7 633 aa13.59□□□□□ -0.23
SS18-225ENST00000585121 SUSD6Q92537 303 aa13.59□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms