RNA–Protein interactions for RNA: ENST00000584944.5

TRAF4-215, Transcript of TNF receptor associated factor 4, humanhuman

TSL 2

Gene TRAF4, Length 825 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-215ENST00000584944 ZPBP2Q6X784 338 aa15.18■□□□□ 0.02
TRAF4-215ENST00000584944 HS2ST1Q7LGA3 356 aa15.18■□□□□ 0.02
TRAF4-215ENST00000584944 ZBTB33Q86T24 672 aa15.18■□□□□ 0.02
TRAF4-215ENST00000584944 CDR2LQ86X02 465 aaPredicted RBP15.18■□□□□ 0.02
TRAF4-215ENST00000584944 URGCPQ8TCY9 931 aa15.18■□□□□ 0.02
TRAF4-215ENST00000584944 ADAMTS19Q8TE59 1207 aa15.18■□□□□ 0.02
TRAF4-215ENST00000584944 NOC3LQ8WTT2 800 aaKnown RBP15.18■□□□□ 0.02
TRAF4-215ENST00000584944 GSDMAQ96QA5 445 aa15.18■□□□□ 0.02
TRAF4-215ENST00000584944 NUP62CLQ9H1M0 184 aa15.18■□□□□ 0.02
TRAF4-215ENST00000584944 ST6GALNAC4Q9H4F1 302 aa15.18■□□□□ 0.02
TRAF4-215ENST00000584944 SLC39A2Q9NP94 309 aa15.18■□□□□ 0.02
TRAF4-215ENST00000584944 UBN1Q9NPG3 1134 aa15.18■□□□□ 0.02
TRAF4-215ENST00000584944 LMBRD1Q9NUN5 540 aa15.18■□□□□ 0.02
TRAF4-215ENST00000584944 PARP2Q9UGN5 583 aa15.18■□□□□ 0.02
TRAF4-215ENST00000584944 TNFSF13BQ9Y275 285 aa15.18■□□□□ 0.02
TRAF4-215ENST00000584944 INSL6Q9Y581 213 aa15.18■□□□□ 0.02
TRAF4-215ENST00000584944 MTCH2Q9Y6C9 303 aa15.18■□□□□ 0.02
TRAF4-215ENST00000584944 PTPRSQ13332 1948 aa15.17■□□□□ 0.02
TRAF4-215ENST00000584944 LOC101059915A0A1B0GWI6 518 aaPredicted RBP15.17■□□□□ 0.02
TRAF4-215ENST00000584944 C9IYK1 514 aa15.17■□□□□ 0.02
TRAF4-215ENST00000584944 EIF3DO15371 548 aaKnown RBP eCLIP15.17■□□□□ 0.02
TRAF4-215ENST00000584944 PRR29P0C7W0 189 aa15.17■□□□□ 0.02
TRAF4-215ENST00000584944 MYBP10242 640 aa15.17■□□□□ 0.02
TRAF4-215ENST00000584944 HSP90AA2PQ14568 343 aaPredicted RBP15.17■□□□□ 0.02
TRAF4-215ENST00000584944 DSC3Q14574 896 aa15.17■□□□□ 0.02
TRAF4-215ENST00000584944 AMHR2Q16671 573 aa15.17■□□□□ 0.02
TRAF4-215ENST00000584944 TCTN1Q2MV58 587 aa15.17■□□□□ 0.02
TRAF4-215ENST00000584944 SPOUT1Q5T280 376 aaKnown RBP15.17■□□□□ 0.02
TRAF4-215ENST00000584944 MPZL3Q6UWV2 235 aa15.17■□□□□ 0.02
TRAF4-215ENST00000584944 ECHDC2Q86YB7 292 aa15.17■□□□□ 0.02
TRAF4-215ENST00000584944 MICALL1Q8N3F8 863 aa15.17■□□□□ 0.02
TRAF4-215ENST00000584944 TOP1MTQ969P6 601 aa15.17■□□□□ 0.02
TRAF4-215ENST00000584944 SYAP1Q96A49 352 aaPredicted RBP15.17■□□□□ 0.02
TRAF4-215ENST00000584944 RAD9AQ99638 391 aa15.17■□□□□ 0.02
TRAF4-215ENST00000584944 ACO2Q99798 780 aaKnown RBP15.17■□□□□ 0.02
TRAF4-215ENST00000584944 CCDC94Q9BW85 323 aaPredicted RBP15.17■□□□□ 0.02
TRAF4-215ENST00000584944 PDZD7Q9H5P4 517 aa15.17■□□□□ 0.02
TRAF4-215ENST00000584944 ELAC1Q9H777 363 aaKnown RBP15.17■□□□□ 0.02
TRAF4-215ENST00000584944 CERS4Q9HA82 394 aa15.17■□□□□ 0.02
TRAF4-215ENST00000584944 UBE4BO95155 1302 aa15.17■□□□□ 0.02
TRAF4-215ENST00000584944 MYH11P35749 1972 aa15.16■□□□□ 0.02
TRAF4-215ENST00000584944 BDP1A6H8Y1 2624 aa15.16■□□□□ 0.02
TRAF4-215ENST00000584944 GJB5O95377 273 aa15.16■□□□□ 0.02
TRAF4-215ENST00000584944 MCM4P33991 863 aa15.16■□□□□ 0.02
TRAF4-215ENST00000584944 RNASELQ05823 741 aaKnown RBP15.16■□□□□ 0.02
TRAF4-215ENST00000584944 BTG3Q14201 252 aaPredicted RBP15.16■□□□□ 0.02
TRAF4-215ENST00000584944 KCNB1Q14721 858 aa15.16■□□□□ 0.02
TRAF4-215ENST00000584944 NOLC1Q14978 699 aaKnown RBP eCLIP15.16■□□□□ 0.02
TRAF4-215ENST00000584944 KYAT1Q16773 422 aa15.16■□□□□ 0.02
TRAF4-215ENST00000584944 NT5DC1Q5TFE4 455 aa15.16■□□□□ 0.02
TRAF4-215ENST00000584944 TMCO2Q7Z6W1 182 aaPredicted RBP15.16■□□□□ 0.02
TRAF4-215ENST00000584944 RTN4RL1Q86UN2 441 aaPredicted RBP15.16■□□□□ 0.02
TRAF4-215ENST00000584944 MAP4K3Q8IVH8 894 aa15.16■□□□□ 0.02
TRAF4-215ENST00000584944 ELOA2Q8IYF1 753 aaPredicted RBP15.16■□□□□ 0.02
TRAF4-215ENST00000584944 POMGNT1Q8WZA1 660 aa15.16■□□□□ 0.02
TRAF4-215ENST00000584944 HPS3Q969F9 1004 aa15.16■□□□□ 0.02
TRAF4-215ENST00000584944 RPS6KC1Q96S38 1066 aa15.16■□□□□ 0.02
TRAF4-215ENST00000584944 UHRF1Q96T88 793 aaPredicted RBP15.16■□□□□ 0.02
TRAF4-215ENST00000584944 MSTO1Q9BUK6 570 aa15.16■□□□□ 0.02
TRAF4-215ENST00000584944 TRAIPQ9BWF2 469 aa15.16■□□□□ 0.02
TRAF4-215ENST00000584944 EIF2AQ9BY44 585 aaKnown RBP15.16■□□□□ 0.02
TRAF4-215ENST00000584944 TOPORSQ9NS56 1045 aaPredicted RBP15.16■□□□□ 0.02
TRAF4-215ENST00000584944 INPP5FQ9Y2H2 1132 aa15.16■□□□□ 0.02
TRAF4-215ENST00000584944 USP20Q9Y2K6 914 aa15.16■□□□□ 0.02
TRAF4-215ENST00000584944 IPPQ9Y573 584 aa15.16■□□□□ 0.02
TRAF4-215ENST00000584944 TCF20Q9UGU0 1960 aaKnown RBP15.16■□□□□ 0.02
TRAF4-215ENST00000584944 TBKBP1A7MCY6 615 aa15.15■□□□□ 0.02
TRAF4-215ENST00000584944 PRPF6O94906 941 aaKnown RBP15.15■□□□□ 0.02
TRAF4-215ENST00000584944 MCF2P10911 925 aa15.15■□□□□ 0.02
TRAF4-215ENST00000584944 BMP1P13497 986 aa15.15■□□□□ 0.02
TRAF4-215ENST00000584944 OSTNP61366 133 aa15.15■□□□□ 0.02
TRAF4-215ENST00000584944 NELFCDQ8IXH7 590 aa15.15■□□□□ 0.02
TRAF4-215ENST00000584944 THNSL1Q8IYQ7 743 aa15.15■□□□□ 0.02
TRAF4-215ENST00000584944 GOLGA5Q8TBA6 731 aa15.15■□□□□ 0.02
TRAF4-215ENST00000584944 LINC01599Q8WXQ3 324 aa15.15■□□□□ 0.02
TRAF4-215ENST00000584944 ARNTL2Q8WYA1 636 aa15.15■□□□□ 0.02
TRAF4-215ENST00000584944 RSPH1Q8WYR4 309 aa15.15■□□□□ 0.02
TRAF4-215ENST00000584944 FAM193BQ96PV7 902 aaPredicted RBP15.15■□□□□ 0.02
TRAF4-215ENST00000584944 MRPL9Q9BYD2 267 aaKnown RBP15.15■□□□□ 0.02
TRAF4-215ENST00000584944 GBP3Q9H0R5 595 aa15.15■□□□□ 0.02
TRAF4-215ENST00000584944 RSAD1Q9HA92 442 aa15.15■□□□□ 0.02
TRAF4-215ENST00000584944 GDAQ9Y2T3 454 aa15.15■□□□□ 0.02
TRAF4-215ENST00000584944 PCDHA5Q9Y5H7 936 aa15.15■□□□□ 0.02
TRAF4-215ENST00000584944 SIP14410 1827 aa15.15■□□□□ 0.02
TRAF4-215ENST00000584944 ZNF623O75123 536 aa15.14■□□□□ 0.01
TRAF4-215ENST00000584944 RHOBTB3O94955 611 aa15.14■□□□□ 0.01
TRAF4-215ENST00000584944 FGFR1P11362 822 aa15.14■□□□□ 0.01
TRAF4-215ENST00000584944 CASP5P51878 434 aa15.14■□□□□ 0.01
TRAF4-215ENST00000584944 FAM189BP81408 668 aa15.14■□□□□ 0.01
TRAF4-215ENST00000584944 TFF2Q03403 129 aa15.14■□□□□ 0.01
TRAF4-215ENST00000584944 PAN2Q504Q3 1202 aaKnown RBP15.14■□□□□ 0.01
TRAF4-215ENST00000584944 ARMCX5Q6P1M9 558 aa15.14■□□□□ 0.01
TRAF4-215ENST00000584944 TAS1R3Q7RTX0 852 aa15.14■□□□□ 0.01
TRAF4-215ENST00000584944 SPRED2Q7Z698 418 aa15.14■□□□□ 0.01
TRAF4-215ENST00000584944 FIBCD1Q8N539 461 aa15.14■□□□□ 0.01
TRAF4-215ENST00000584944 HELQQ8TDG4 1101 aa15.14■□□□□ 0.01
TRAF4-215ENST00000584944 LPPQ93052 612 aa15.14■□□□□ 0.01
TRAF4-215ENST00000584944 CLSTN2Q9H4D0 955 aa15.14■□□□□ 0.01
TRAF4-215ENST00000584944 NXF3Q9H4D5 531 aaKnown RBP15.14■□□□□ 0.01
TRAF4-215ENST00000584944 KANSL3Q9P2N6 904 aa15.14■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms