RNA–Protein interactions for RNA: ENST00000583948.5

NUP85-224, Transcript of nucleoporin 85, humanhuman

TSL 2

Gene NUP85, Length 1,197 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP85-224ENST00000583948 MIOSQ9NXC5 875 aa12.84□□□□□ -0.35
NUP85-224ENST00000583948 PIN4Q9Y237 131 aaKnown RBP12.84□□□□□ -0.35
NUP85-224ENST00000583948 FAN1Q9Y2M0 1017 aa12.84□□□□□ -0.35
NUP85-224ENST00000583948 KIF3AQ9Y496 699 aa12.84□□□□□ -0.35
NUP85-224ENST00000583948 MAFBQ9Y5Q3 323 aaPredicted RBP12.84□□□□□ -0.35
NUP85-224ENST00000583948 DMXL2Q8TDJ6 3036 aa12.84□□□□□ -0.35
NUP85-224ENST00000583948 HRO43593 1189 aa12.83□□□□□ -0.36
NUP85-224ENST00000583948 STX6O43752 255 aa12.83□□□□□ -0.36
NUP85-224ENST00000583948 GAS2O43903 313 aaKnown RBP12.83□□□□□ -0.36
NUP85-224ENST00000583948 TBC1D4O60343 1298 aa12.83□□□□□ -0.36
NUP85-224ENST00000583948 CDKL5O76039 1030 aa12.83□□□□□ -0.36
NUP85-224ENST00000583948 URODP06132 367 aa12.83□□□□□ -0.36
NUP85-224ENST00000583948 PDCP20941 246 aa12.83□□□□□ -0.36
NUP85-224ENST00000583948 SYT1P21579 422 aa12.83□□□□□ -0.36
NUP85-224ENST00000583948 CDC27P30260 824 aa12.83□□□□□ -0.36
NUP85-224ENST00000583948 OR1G1P47890 313 aa12.83□□□□□ -0.36
NUP85-224ENST00000583948 SLC26A2P50443 739 aa12.83□□□□□ -0.36
NUP85-224ENST00000583948 NFKBIBQ15653 356 aa12.83□□□□□ -0.36
NUP85-224ENST00000583948 ZBTB41Q5SVQ8 909 aa12.83□□□□□ -0.36
NUP85-224ENST00000583948 LARP1BQ659C4 914 aaKnown RBP12.83□□□□□ -0.36
NUP85-224ENST00000583948 WWC2Q6AWC2 1192 aa12.83□□□□□ -0.36
NUP85-224ENST00000583948 MIS18BP1Q6P0N0 1132 aa12.83□□□□□ -0.36
NUP85-224ENST00000583948 PLA2G4DQ86XP0 818 aa12.83□□□□□ -0.36
NUP85-224ENST00000583948 SHDQ96IW2 340 aa12.83□□□□□ -0.36
NUP85-224ENST00000583948 GBP4Q96PP9 640 aa12.83□□□□□ -0.36
NUP85-224ENST00000583948 MAP7D2Q96T17 732 aa12.83□□□□□ -0.36
NUP85-224ENST00000583948 ANO3Q9BYT9 981 aa12.83□□□□□ -0.36
NUP85-224ENST00000583948 PRKD2Q9BZL6 878 aa12.83□□□□□ -0.36
NUP85-224ENST00000583948 PRMT8Q9NR22 394 aaPredicted RBP12.83□□□□□ -0.36
NUP85-224ENST00000583948 C2orf42Q9NWW7 574 aa12.83□□□□□ -0.36
NUP85-224ENST00000583948 NID2Q14112 1375 aa12.82□□□□□ -0.36
NUP85-224ENST00000583948 LOC400499M0QZD8 3231 aa12.82□□□□□ -0.36
NUP85-224ENST00000583948 CCL16O15467 120 aa12.82□□□□□ -0.36
NUP85-224ENST00000583948 DDAH1O94760 285 aa12.82□□□□□ -0.36
NUP85-224ENST00000583948 SOD2P04179 222 aa12.82□□□□□ -0.36
NUP85-224ENST00000583948 ALDH2P05091 517 aa12.82□□□□□ -0.36
NUP85-224ENST00000583948 PROS1P07225 676 aa12.82□□□□□ -0.36
NUP85-224ENST00000583948 ADH1AP07327 375 aa12.82□□□□□ -0.36
NUP85-224ENST00000583948 CALM1P0DP23 149 aa12.82□□□□□ -0.36
NUP85-224ENST00000583948 CALM2P0DP24 149 aa12.82□□□□□ -0.36
NUP85-224ENST00000583948 CALM3P0DP25 149 aa12.82□□□□□ -0.36
NUP85-224ENST00000583948 ADD1P35611 737 aaKnown RBP12.82□□□□□ -0.36
NUP85-224ENST00000583948 ZNF76P36508 570 aa12.82□□□□□ -0.36
NUP85-224ENST00000583948 HEATR6Q6AI08 1181 aaKnown RBP12.82□□□□□ -0.36
NUP85-224ENST00000583948 PRSS55Q6UWB4 352 aaPredicted RBP12.82□□□□□ -0.36
NUP85-224ENST00000583948 CTCFLQ8NI51 663 aaPredicted RBP12.82□□□□□ -0.36
NUP85-224ENST00000583948 FGF13Q92913 245 aa12.82□□□□□ -0.36
NUP85-224ENST00000583948 PHKBQ93100 1093 aa12.82□□□□□ -0.36
NUP85-224ENST00000583948 NXPE3Q969Y0 559 aa12.82□□□□□ -0.36
NUP85-224ENST00000583948 CLDN23Q96B33 292 aa12.82□□□□□ -0.36
NUP85-224ENST00000583948 HERC2P3Q9BVR0 1158 aa12.82□□□□□ -0.36
NUP85-224ENST00000583948 GPR62Q9BZJ7 368 aa12.82□□□□□ -0.36
NUP85-224ENST00000583948 RNF39Q9H2S5 420 aa12.82□□□□□ -0.36
NUP85-224ENST00000583948 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP12.82□□□□□ -0.36
NUP85-224ENST00000583948 ORC3Q9UBD5 711 aaPredicted RBP12.82□□□□□ -0.36
NUP85-224ENST00000583948 ZDHHC9Q9Y397 364 aa12.82□□□□□ -0.36
NUP85-224ENST00000583948 ITPR1Q14643 2758 aa12.81□□□□□ -0.36
NUP85-224ENST00000583948 IGLV3-22A0A075B6J6 115 aa12.81□□□□□ -0.36
NUP85-224ENST00000583948 CCDC196A0A1B0GTZ2 297 aa12.81□□□□□ -0.36
NUP85-224ENST00000583948 CHURC1-FNTBB4DL54 471 aa12.81□□□□□ -0.36
NUP85-224ENST00000583948 H3BQV1 296 aa12.81□□□□□ -0.36
NUP85-224ENST00000583948 GIPC1O14908 333 aa12.81□□□□□ -0.36
NUP85-224ENST00000583948 ZSCAN22P10073 491 aaPredicted RBP12.81□□□□□ -0.36
NUP85-224ENST00000583948 FNTBP49356 437 aa12.81□□□□□ -0.36
NUP85-224ENST00000583948 RCAN1P53805 252 aa12.81□□□□□ -0.36
NUP85-224ENST00000583948 SATB1Q01826 763 aa12.81□□□□□ -0.36
NUP85-224ENST00000583948 JAKMIP3Q5VZ66 844 aa12.81□□□□□ -0.36
NUP85-224ENST00000583948 LILRA6Q6PI73 481 aa12.81□□□□□ -0.36
NUP85-224ENST00000583948 FANCBQ8NB91 859 aa12.81□□□□□ -0.36
NUP85-224ENST00000583948 DACT1Q9NYF0 836 aa12.81□□□□□ -0.36
NUP85-224ENST00000583948 CDH7Q9ULB5 785 aa12.81□□□□□ -0.36
NUP85-224ENST00000583948 POLIQ9UNA4 740 aa12.81□□□□□ -0.36
NUP85-224ENST00000583948 MTMR6Q9Y217 621 aa12.81□□□□□ -0.36
NUP85-224ENST00000583948 PCDHB2Q9Y5E7 798 aa12.81□□□□□ -0.36
NUP85-224ENST00000583948 BPTFQ12830 3046 aa12.81□□□□□ -0.36
NUP85-224ENST00000583948 IPO5O00410 1097 aaKnown RBP12.8□□□□□ -0.36
NUP85-224ENST00000583948 ADAM12O43184 909 aa12.8□□□□□ -0.36
NUP85-224ENST00000583948 EFEMP2O95967 443 aa12.8□□□□□ -0.36
NUP85-224ENST00000583948 GLUD2P49448 558 aa12.8□□□□□ -0.36
NUP85-224ENST00000583948 PRKCQQ04759 706 aa12.8□□□□□ -0.36
NUP85-224ENST00000583948 SSRP1Q08945 709 aaKnown RBP12.8□□□□□ -0.36
NUP85-224ENST00000583948 GAS6Q14393 721 aa12.8□□□□□ -0.36
NUP85-224ENST00000583948 GRM2Q14416 872 aa12.8□□□□□ -0.36
NUP85-224ENST00000583948 FOXD4L6Q3SYB3 417 aaPredicted RBP12.8□□□□□ -0.36
NUP85-224ENST00000583948 UBXN11Q5T124 520 aa12.8□□□□□ -0.36
NUP85-224ENST00000583948 LAIR1Q6GTX8 287 aa12.8□□□□□ -0.36
NUP85-224ENST00000583948 FOXD4L3Q6VB84 417 aaPredicted RBP12.8□□□□□ -0.36
NUP85-224ENST00000583948 ZNF687Q8N1G0 1237 aa12.8□□□□□ -0.36
NUP85-224ENST00000583948 SLC26A6Q9BXS9 759 aa12.8□□□□□ -0.36
NUP85-224ENST00000583948 RXFP1Q9HBX9 757 aa12.8□□□□□ -0.36
NUP85-224ENST00000583948 RBM28Q9NW13 759 aaKnown RBP12.8□□□□□ -0.36
NUP85-224ENST00000583948 RAB23Q9ULC3 237 aa12.8□□□□□ -0.36
NUP85-224ENST00000583948 SAMM50Q9Y512 469 aa12.8□□□□□ -0.36
NUP85-224ENST00000583948 HES2Q9Y543 173 aa12.8□□□□□ -0.36
NUP85-224ENST00000583948 TM4SF5O14894 197 aa12.79□□□□□ -0.36
NUP85-224ENST00000583948 AXIN1O15169 862 aa12.79□□□□□ -0.36
NUP85-224ENST00000583948 MAGEB2O15479 319 aa12.79□□□□□ -0.36
NUP85-224ENST00000583948 CHMP2AO43633 222 aa12.79□□□□□ -0.36
NUP85-224ENST00000583948 F13A1P00488 732 aa12.79□□□□□ -0.36
NUP85-224ENST00000583948 OATP04181 439 aa12.79□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 67.8 ms