RNA–Protein interactions for RNA: ENST00000583800.1

SMCHD1-210, Transcript of structural maintenance of chromosomes flexible hinge domain containing 1, humanhuman

TSL 5

Gene SMCHD1, Length 865 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCHD1-210ENST00000583800 AKAP17AQ02040 695 aaKnown RBP8.75□□□□□ -1.01
SMCHD1-210ENST00000583800 NTRK3Q16288 839 aa8.75□□□□□ -1.01
SMCHD1-210ENST00000583800 MSS51Q4VC12 460 aa8.75□□□□□ -1.01
SMCHD1-210ENST00000583800 TWF2Q6IBS0 349 aaKnown RBP8.75□□□□□ -1.01
SMCHD1-210ENST00000583800 BLOC1S2Q6QNY1 142 aa8.75□□□□□ -1.01
SMCHD1-210ENST00000583800 MIER3Q7Z3K6 550 aa8.75□□□□□ -1.01
SMCHD1-210ENST00000583800 UBALD2Q8IYN6 164 aa8.75□□□□□ -1.01
SMCHD1-210ENST00000583800 BICD2Q8TD16 824 aa8.75□□□□□ -1.01
SMCHD1-210ENST00000583800 TBCKQ8TEA7 893 aa8.75□□□□□ -1.01
SMCHD1-210ENST00000583800 SREK1Q8WXA9 508 aaKnown RBP8.75□□□□□ -1.01
SMCHD1-210ENST00000583800 IGSF21Q96ID5 467 aa8.75□□□□□ -1.01
SMCHD1-210ENST00000583800 CEP89Q96ST8 783 aa8.75□□□□□ -1.01
SMCHD1-210ENST00000583800 RIT2Q99578 217 aa8.75□□□□□ -1.01
SMCHD1-210ENST00000583800 VN1R3Q9BXE9 311 aa8.75□□□□□ -1.01
SMCHD1-210ENST00000583800 RNF26Q9BY78 433 aaPredicted RBP8.75□□□□□ -1.01
SMCHD1-210ENST00000583800 GCOM2Q9BZD3 368 aaPredicted RBP8.75□□□□□ -1.01
SMCHD1-210ENST00000583800 GBP3Q9H0R5 595 aa8.75□□□□□ -1.01
SMCHD1-210ENST00000583800 NRDE2Q9H7Z3 1164 aa8.75□□□□□ -1.01
SMCHD1-210ENST00000583800 FAM105AQ9NUU6 356 aa8.75□□□□□ -1.01
SMCHD1-210ENST00000583800 TBC1D13Q9NVG8 400 aa8.75□□□□□ -1.01
SMCHD1-210ENST00000583800 DZANK1Q9NVP4 752 aa8.75□□□□□ -1.01
SMCHD1-210ENST00000583800 DNAJB4Q9UDY4 337 aa8.75□□□□□ -1.01
SMCHD1-210ENST00000583800 DBR1Q9UK59 544 aaKnown RBP8.75□□□□□ -1.01
SMCHD1-210ENST00000583800 PIN4Q9Y237 131 aaKnown RBP8.75□□□□□ -1.01
SMCHD1-210ENST00000583800 MTCL1Q9Y4B5 1905 aaKnown RBP8.75□□□□□ -1.01
SMCHD1-210ENST00000583800 ZFHX2Q9C0A1 2572 aaPredicted RBP8.75□□□□□ -1.01
SMCHD1-210ENST00000583800 PTPRZ1P23471 2315 aaPredicted RBP8.75□□□□□ -1.01
SMCHD1-210ENST00000583800 IGKV6-21A0A0C4DH24 114 aa8.74□□□□□ -1.01
SMCHD1-210ENST00000583800 ANKRD33BA6NCL7 494 aa8.74□□□□□ -1.01
SMCHD1-210ENST00000583800 PSMD10O75832 226 aa8.74□□□□□ -1.01
SMCHD1-210ENST00000583800 SSBP05455 408 aaKnown RBP eCLIP8.74□□□□□ -1.01
SMCHD1-210ENST00000583800 GALTP07902 379 aa8.74□□□□□ -1.01
SMCHD1-210ENST00000583800 SERPINB4P48594 390 aa8.74□□□□□ -1.01
SMCHD1-210ENST00000583800 SLC11A1P49279 550 aa8.74□□□□□ -1.01
SMCHD1-210ENST00000583800 CCT2P78371 535 aaKnown RBP8.74□□□□□ -1.01
SMCHD1-210ENST00000583800 BMS1Q14692 1282 aaKnown RBP8.74□□□□□ -1.01
SMCHD1-210ENST00000583800 PTPN14Q15678 1187 aa8.74□□□□□ -1.01
SMCHD1-210ENST00000583800 CRTC2Q53ET0 693 aaPredicted RBP8.74□□□□□ -1.01
SMCHD1-210ENST00000583800 XKR3Q5GH77 459 aa8.74□□□□□ -1.01
SMCHD1-210ENST00000583800 NOMO2Q5JPE7 1267 aa8.74□□□□□ -1.01
SMCHD1-210ENST00000583800 ATAT1Q5SQI0 421 aa8.74□□□□□ -1.01
SMCHD1-210ENST00000583800 PLA2G4FQ68DD2 849 aa8.74□□□□□ -1.01
SMCHD1-210ENST00000583800 TMC5Q6UXY8 1006 aa8.74□□□□□ -1.01
SMCHD1-210ENST00000583800 ASCL5Q7RTU5 278 aa8.74□□□□□ -1.01
SMCHD1-210ENST00000583800 DDX53Q86TM3 631 aaKnown RBP8.74□□□□□ -1.01
SMCHD1-210ENST00000583800 RHPN2Q8IUC4 686 aa8.74□□□□□ -1.01
SMCHD1-210ENST00000583800 KSR1Q8IVT5 923 aa8.74□□□□□ -1.01
SMCHD1-210ENST00000583800 ZDHHC14Q8IZN3 488 aa8.74□□□□□ -1.01
SMCHD1-210ENST00000583800 TMEM87AQ8NBN3 555 aa8.74□□□□□ -1.01
SMCHD1-210ENST00000583800 SLC22A17Q8WUG5 538 aa8.74□□□□□ -1.01
SMCHD1-210ENST00000583800 HPS1Q92902 700 aa8.74□□□□□ -1.01
SMCHD1-210ENST00000583800 KCNB2Q92953 911 aa8.74□□□□□ -1.01
SMCHD1-210ENST00000583800 NLRP4Q96MN2 994 aa8.74□□□□□ -1.01
SMCHD1-210ENST00000583800 NIFKQ9BYG3 293 aaKnown RBP8.74□□□□□ -1.01
SMCHD1-210ENST00000583800 IRF2BPLQ9H1B7 796 aa8.74□□□□□ -1.01
SMCHD1-210ENST00000583800 NCOA5Q9HCD5 579 aaKnown RBP8.74□□□□□ -1.01
SMCHD1-210ENST00000583800 CHST12Q9NRB3 414 aa8.74□□□□□ -1.01
SMCHD1-210ENST00000583800 SUCLA2Q9P2R7 463 aaPredicted RBP8.74□□□□□ -1.01
SMCHD1-210ENST00000583800 SNX14Q9Y5W7 946 aa8.74□□□□□ -1.01
SMCHD1-210ENST00000583800 IRAK3Q9Y616 596 aa8.74□□□□□ -1.01
SMCHD1-210ENST00000583800 RIF1Q5UIP0 2472 aaKnown RBP8.74□□□□□ -1.01
SMCHD1-210ENST00000583800 DMDP11532 3685 aa8.74□□□□□ -1.01
SMCHD1-210ENST00000583800 DOCK6Q96HP0 2047 aa8.73□□□□□ -1.01
SMCHD1-210ENST00000583800 PROB1E7EW31 1015 aa8.73□□□□□ -1.01
SMCHD1-210ENST00000583800 OFD1O75665 1012 aa8.73□□□□□ -1.01
SMCHD1-210ENST00000583800 SKIP12755 728 aa8.73□□□□□ -1.01
SMCHD1-210ENST00000583800 IFNAR1P17181 557 aa8.73□□□□□ -1.01
SMCHD1-210ENST00000583800 RPS6KB1P23443 525 aa8.73□□□□□ -1.01
SMCHD1-210ENST00000583800 HSPA4P34932 840 aa8.73□□□□□ -1.01
SMCHD1-210ENST00000583800 DNM2P50570 870 aa8.73□□□□□ -1.01
SMCHD1-210ENST00000583800 USP11P51784 963 aa8.73□□□□□ -1.01
SMCHD1-210ENST00000583800 AFF1P51825 1210 aaKnown RBP8.73□□□□□ -1.01
SMCHD1-210ENST00000583800 POLGP54098 1239 aaPredicted RBP8.73□□□□□ -1.01
SMCHD1-210ENST00000583800 NLRP5P59047 1200 aa8.73□□□□□ -1.01
SMCHD1-210ENST00000583800 RNASELQ05823 741 aaKnown RBP8.73□□□□□ -1.01
SMCHD1-210ENST00000583800 GIT2Q14161 759 aa8.73□□□□□ -1.01
SMCHD1-210ENST00000583800 Q4G0T1 1027 aa8.73□□□□□ -1.01
SMCHD1-210ENST00000583800 CWF19L1Q69YN2 538 aaKnown RBP8.73□□□□□ -1.01
SMCHD1-210ENST00000583800 GLB1LQ6UWU2 654 aa8.73□□□□□ -1.01
SMCHD1-210ENST00000583800 B3GNT9Q6UX72 402 aa8.73□□□□□ -1.01
SMCHD1-210ENST00000583800 RNF19BQ6ZMZ0 732 aa8.73□□□□□ -1.01
SMCHD1-210ENST00000583800 CATSPER4Q7RTX7 472 aa8.73□□□□□ -1.01
SMCHD1-210ENST00000583800 CABP7Q86V35 215 aa8.73□□□□□ -1.01
SMCHD1-210ENST00000583800 ZNF410Q86VK4 478 aa8.73□□□□□ -1.01
SMCHD1-210ENST00000583800 ZNF280BQ86YH2 543 aa8.73□□□□□ -1.01
SMCHD1-210ENST00000583800 RDM1Q8NG50 284 aa8.73□□□□□ -1.01
SMCHD1-210ENST00000583800 AGXT2Q9BYV1 514 aa8.73□□□□□ -1.01
SMCHD1-210ENST00000583800 MFSD1Q9H3U5 465 aa8.73□□□□□ -1.01
SMCHD1-210ENST00000583800 SFXN1Q9H9B4 322 aa8.73□□□□□ -1.01
SMCHD1-210ENST00000583800 CYP26B1Q9NR63 512 aa8.73□□□□□ -1.01
SMCHD1-210ENST00000583800 SPTBN4Q9H254 2564 aa8.73□□□□□ -1.01
SMCHD1-210ENST00000583800 PRR23AA6NEV1 266 aa8.72□□□□□ -1.01
SMCHD1-210ENST00000583800 EML1O00423 815 aa8.72□□□□□ -1.01
SMCHD1-210ENST00000583800 SLC37A4O43826 429 aa8.72□□□□□ -1.01
SMCHD1-210ENST00000583800 MAFO75444 373 aaPredicted RBP8.72□□□□□ -1.01
SMCHD1-210ENST00000583800 DDHD2O94830 711 aa8.72□□□□□ -1.01
SMCHD1-210ENST00000583800 LORP23490 312 aaPredicted RBP8.72□□□□□ -1.01
SMCHD1-210ENST00000583800 PDIA3P30101 505 aaKnown RBP8.72□□□□□ -1.01
SMCHD1-210ENST00000583800 NBL1P41271 181 aa8.72□□□□□ -1.01
SMCHD1-210ENST00000583800 RAB27AP51159 221 aa8.72□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms