RNA–Protein interactions for RNA: ENST00000582792.5

SS18-222, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 5

Gene SS18, Length 531 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-222ENST00000582792 PTENP60484 403 aa15.1■□□□□ 0.01
SS18-222ENST00000582792 NCBP1Q09161 790 aaKnown RBP15.1■□□□□ 0.01
SS18-222ENST00000582792 MXD4Q14582 209 aaPredicted RBP15.1■□□□□ 0.01
SS18-222ENST00000582792 XKR9Q5GH70 373 aa15.1■□□□□ 0.01
SS18-222ENST00000582792 IFNLR1Q8IU57 520 aaPredicted RBP15.1■□□□□ 0.01
SS18-222ENST00000582792 GPR65Q8IYL9 337 aa15.1■□□□□ 0.01
SS18-222ENST00000582792 DYDC2Q96IM9 177 aa15.1■□□□□ 0.01
SS18-222ENST00000582792 CPB2Q96IY4 423 aa15.1■□□□□ 0.01
SS18-222ENST00000582792 PHF20Q9BVI0 1012 aa15.1■□□□□ 0.01
SS18-222ENST00000582792 NT5C3AQ9H0P0 336 aa15.1■□□□□ 0.01
SS18-222ENST00000582792 CSRNP2Q9H175 543 aa15.1■□□□□ 0.01
SS18-222ENST00000582792 ZSWIM4Q9H7M6 989 aa15.1■□□□□ 0.01
SS18-222ENST00000582792 TBC1D17Q9HA65 648 aa15.1■□□□□ 0.01
SS18-222ENST00000582792 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP15.1■□□□□ 0.01
SS18-222ENST00000582792 ZDHHC7Q9NXF8 308 aa15.1■□□□□ 0.01
SS18-222ENST00000582792 RGL1Q9NZL6 768 aa15.1■□□□□ 0.01
SS18-222ENST00000582792 CA14Q9ULX7 337 aa15.1■□□□□ 0.01
SS18-222ENST00000582792 GIT1Q9Y2X7 761 aa15.1■□□□□ 0.01
SS18-222ENST00000582792 HES2Q9Y543 173 aa15.1■□□□□ 0.01
SS18-222ENST00000582792 ZBTB39O15060 712 aa15.09■□□□□ 0.01
SS18-222ENST00000582792 TGM5O43548 720 aa15.09■□□□□ 0.01
SS18-222ENST00000582792 CCNT1O60563 726 aaKnown RBP15.09■□□□□ 0.01
SS18-222ENST00000582792 SPATA31D3P0C874 917 aa15.09■□□□□ 0.01
SS18-222ENST00000582792 LAMP2P13473 410 aa15.09■□□□□ 0.01
SS18-222ENST00000582792 POU5F1BQ06416 359 aa15.09■□□□□ 0.01
SS18-222ENST00000582792 SPIRE1Q08AE8 756 aa15.09■□□□□ 0.01
SS18-222ENST00000582792 STK3Q13188 491 aa15.09■□□□□ 0.01
SS18-222ENST00000582792 NCAPH2Q6IBW4 605 aa15.09■□□□□ 0.01
SS18-222ENST00000582792 PHLDB3Q6NSJ2 640 aa15.09■□□□□ 0.01
SS18-222ENST00000582792 LILRA6Q6PI73 481 aa15.09■□□□□ 0.01
SS18-222ENST00000582792 SPATA31D4Q6ZUB0 917 aa15.09■□□□□ 0.01
SS18-222ENST00000582792 PALB2Q86YC2 1186 aa15.09■□□□□ 0.01
SS18-222ENST00000582792 GPR152Q8TDT2 470 aa15.09■□□□□ 0.01
SS18-222ENST00000582792 NAP1L4Q99733 375 aaKnown RBP15.09■□□□□ 0.01
SS18-222ENST00000582792 LARP6Q9BRS8 491 aaKnown RBP15.09■□□□□ 0.01
SS18-222ENST00000582792 COLEC11Q9BWP8 271 aa15.09■□□□□ 0.01
SS18-222ENST00000582792 GPR62Q9BZJ7 368 aa15.09■□□□□ 0.01
SS18-222ENST00000582792 PRKD2Q9BZL6 878 aa15.09■□□□□ 0.01
SS18-222ENST00000582792 PIDD1Q9HB75 910 aa15.09■□□□□ 0.01
SS18-222ENST00000582792 XPNPEP1Q9NQW7 623 aa15.09■□□□□ 0.01
SS18-222ENST00000582792 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP15.09■□□□□ 0.01
SS18-222ENST00000582792 FNIP2Q9P278 1114 aa15.09■□□□□ 0.01
SS18-222ENST00000582792 CYP46A1Q9Y6A2 500 aa15.09■□□□□ 0.01
SS18-222ENST00000582792 ANHXE9PGG2 379 aa15.08■□□□□ 0
SS18-222ENST00000582792 INO80B-WBP1J3KQ70 363 aa15.08■□□□□ 0
SS18-222ENST00000582792 MARCH6O60337 910 aa15.08■□□□□ 0
SS18-222ENST00000582792 LMNAP02545 664 aaKnown RBP15.08■□□□□ 0
SS18-222ENST00000582792 CYP4A11Q02928 519 aa15.08■□□□□ 0
SS18-222ENST00000582792 MBTD1Q05BQ5 628 aa15.08■□□□□ 0
SS18-222ENST00000582792 TFDP1Q14186 410 aa15.08■□□□□ 0
SS18-222ENST00000582792 CTTNQ14247 550 aaKnown RBP15.08■□□□□ 0
SS18-222ENST00000582792 AMHR2Q16671 573 aa15.08■□□□□ 0
SS18-222ENST00000582792 USP41Q3LFD5 358 aa15.08■□□□□ 0
SS18-222ENST00000582792 FUT10Q6P4F1 479 aa15.08■□□□□ 0
SS18-222ENST00000582792 HACE1Q8IYU2 909 aa15.08■□□□□ 0
SS18-222ENST00000582792 GSTCDQ8NEC7 633 aa15.08■□□□□ 0
SS18-222ENST00000582792 KCNG4Q8TDN1 519 aa15.08■□□□□ 0
SS18-222ENST00000582792 B3GALT6Q96L58 329 aa15.08■□□□□ 0
SS18-222ENST00000582792 APOL6Q9BWW8 343 aa15.08■□□□□ 0
SS18-222ENST00000582792 TRIM6Q9C030 488 aaPredicted RBP15.08■□□□□ 0
SS18-222ENST00000582792 NXF3Q9H4D5 531 aaKnown RBP15.08■□□□□ 0
SS18-222ENST00000582792 DLGAP2Q9P1A6 1054 aa15.08■□□□□ 0
SS18-222ENST00000582792 ADAM28Q9UKQ2 775 aa15.08■□□□□ 0
SS18-222ENST00000582792 ARF4P18085 180 aaPredicted RBP15.07■□□□□ 0
SS18-222ENST00000582792 CREMQ03060 361 aa15.07■□□□□ 0
SS18-222ENST00000582792 HTR4Q13639 388 aa15.07■□□□□ 0
SS18-222ENST00000582792 CAPSQ13938 189 aa15.07■□□□□ 0
SS18-222ENST00000582792 POTEGQ6S5H5 508 aa15.07■□□□□ 0
SS18-222ENST00000582792 PIK3AP1Q6ZUJ8 805 aa15.07■□□□□ 0
SS18-222ENST00000582792 GET4Q7L5D6 327 aaPredicted RBP15.07■□□□□ 0
SS18-222ENST00000582792 POTEDQ86YR6 584 aa15.07■□□□□ 0
SS18-222ENST00000582792 TPH2Q8IWU9 490 aa15.07■□□□□ 0
SS18-222ENST00000582792 SLFN12Q8IYM2 578 aa15.07■□□□□ 0
SS18-222ENST00000582792 ASAP3Q8TDY4 903 aa15.07■□□□□ 0
SS18-222ENST00000582792 RIN2Q8WYP3 895 aaPredicted RBP15.07■□□□□ 0
SS18-222ENST00000582792 NFKBIZQ9BYH8 718 aa15.07■□□□□ 0
SS18-222ENST00000582792 BACH2Q9BYV9 841 aa15.07■□□□□ 0
SS18-222ENST00000582792 UPF2Q9HAU5 1272 aaKnown RBP15.07■□□□□ 0
SS18-222ENST00000582792 ARHGEF3Q9NR81 526 aa15.07■□□□□ 0
SS18-222ENST00000582792 SLC2A4RGQ9NR83 387 aa15.07■□□□□ 0
SS18-222ENST00000582792 SIT1Q9Y3P8 196 aa15.07■□□□□ 0
SS18-222ENST00000582792 R4GN57 208 aa15.07■□□□□ 0
SS18-222ENST00000582792 ZMYM2Q9UBW7 1377 aa15.07■□□□□ 0
SS18-222ENST00000582792 ZMYND10O75800 440 aa15.06■□□□□ 0
SS18-222ENST00000582792 CDKL5O76039 1030 aa15.06■□□□□ 0
SS18-222ENST00000582792 SLITRK3O94933 977 aa15.06■□□□□ 0
SS18-222ENST00000582792 BAG4O95429 457 aaKnown RBP15.06■□□□□ 0
SS18-222ENST00000582792 DCNP07585 359 aaKnown RBP15.06■□□□□ 0
SS18-222ENST00000582792 XBP1P17861 261 aa15.06■□□□□ 0
SS18-222ENST00000582792 RPL17P18621 184 aaKnown RBP15.06■□□□□ 0
SS18-222ENST00000582792 AKAP5P24588 427 aa15.06■□□□□ 0
SS18-222ENST00000582792 ARL2P36404 184 aa15.06■□□□□ 0
SS18-222ENST00000582792 RBM25P49756 843 aaKnown RBP15.06■□□□□ 0
SS18-222ENST00000582792 GRIK3Q13003 919 aa15.06■□□□□ 0
SS18-222ENST00000582792 SPECC1Q5M775 1068 aa15.06■□□□□ 0
SS18-222ENST00000582792 SLC27A1Q6PCB7 646 aa15.06■□□□□ 0
SS18-222ENST00000582792 GLYCTKQ8IVS8 523 aa15.06■□□□□ 0
SS18-222ENST00000582792 OXER1Q8TDS5 423 aa15.06■□□□□ 0
SS18-222ENST00000582792 GJB4Q9NTQ9 266 aa15.06■□□□□ 0
SS18-222ENST00000582792 ZFP37Q9Y6Q3 630 aaPredicted RBP15.06■□□□□ 0
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms