RNA–Protein interactions for RNA: ENST00000582653.1

SHMT1-209, Transcript of serine hydroxymethyltransferase 1, humanhuman

TSL 3

Gene SHMT1, Length 879 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT1-209ENST00000582653 CCT6AP40227 531 aaKnown RBP22.66■■□□□ 1.22
SHMT1-209ENST00000582653 OR1G1P47890 313 aa22.66■■□□□ 1.22
SHMT1-209ENST00000582653 FXR2P51116 673 aaKnown RBP eCLIP22.66■■□□□ 1.22
SHMT1-209ENST00000582653 CLCN4P51793 760 aa22.66■■□□□ 1.22
SHMT1-209ENST00000582653 PTGDRQ13258 359 aa22.66■■□□□ 1.22
SHMT1-209ENST00000582653 ZBTB33Q86T24 672 aa22.66■■□□□ 1.22
SHMT1-209ENST00000582653 PLCD3Q8N3E9 789 aa22.66■■□□□ 1.22
SHMT1-209ENST00000582653 MCPH1Q8NEM0 835 aa22.66■■□□□ 1.22
SHMT1-209ENST00000582653 PRRX2Q99811 253 aa22.66■■□□□ 1.22
SHMT1-209ENST00000582653 MARCH5Q9NX47 278 aa22.66■■□□□ 1.22
SHMT1-209ENST00000582653 LRWD1Q9UFC0 647 aa22.66■■□□□ 1.22
SHMT1-209ENST00000582653 TTLL13PA6NNM8 815 aa22.65■■□□□ 1.22
SHMT1-209ENST00000582653 ST18O60284 1047 aa22.65■■□□□ 1.22
SHMT1-209ENST00000582653 CYP11B2P19099 503 aa22.65■■□□□ 1.22
SHMT1-209ENST00000582653 SCNN1GP51170 649 aa22.65■■□□□ 1.22
SHMT1-209ENST00000582653 IER5LQ5T953 404 aa22.65■■□□□ 1.22
SHMT1-209ENST00000582653 SLC27A1Q6PCB7 646 aa22.65■■□□□ 1.22
SHMT1-209ENST00000582653 TMC5Q6UXY8 1006 aa22.65■■□□□ 1.22
SHMT1-209ENST00000582653 TAS1R1Q7RTX1 841 aa22.65■■□□□ 1.22
SHMT1-209ENST00000582653 GPR149Q86SP6 731 aa22.65■■□□□ 1.22
SHMT1-209ENST00000582653 UBALD2Q8IYN6 164 aa22.65■■□□□ 1.22
SHMT1-209ENST00000582653 RNF168Q8IYW5 571 aaPredicted RBP22.65■■□□□ 1.22
SHMT1-209ENST00000582653 ZDHHC14Q8IZN3 488 aa22.65■■□□□ 1.22
SHMT1-209ENST00000582653 KREMEN2Q8NCW0 462 aa22.65■■□□□ 1.22
SHMT1-209ENST00000582653 GSTCDQ8NEC7 633 aa22.65■■□□□ 1.22
SHMT1-209ENST00000582653 RPS6KC1Q96S38 1066 aa22.65■■□□□ 1.22
SHMT1-209ENST00000582653 SORCS3Q9UPU3 1222 aa22.65■■□□□ 1.22
SHMT1-209ENST00000582653 USP20Q9Y2K6 914 aa22.65■■□□□ 1.22
SHMT1-209ENST00000582653 PRG3Q9Y2Y8 225 aaPredicted RBP22.65■■□□□ 1.22
SHMT1-209ENST00000582653 KIAA0319Q5VV43 1072 aa22.64■■□□□ 1.21
SHMT1-209ENST00000582653 TMX3Q96JJ7 454 aa22.64■■□□□ 1.21
SHMT1-209ENST00000582653 PRIMPOLQ96LW4 560 aa22.64■■□□□ 1.21
SHMT1-209ENST00000582653 COLEC11Q9BWP8 271 aa22.64■■□□□ 1.21
SHMT1-209ENST00000582653 FZD8Q9H461 694 aa22.64■■□□□ 1.21
SHMT1-209ENST00000582653 SFXN1Q9H9B4 322 aa22.64■■□□□ 1.21
SHMT1-209ENST00000582653 KLK14Q9P0G3 267 aa22.64■■□□□ 1.21
SHMT1-209ENST00000582653 KIAA1024Q9UPX6 916 aa22.64■■□□□ 1.21
SHMT1-209ENST00000582653 PP2D1A8MPX8 630 aa22.63■■□□□ 1.21
SHMT1-209ENST00000582653 F8W810 466 aa22.63■■□□□ 1.21
SHMT1-209ENST00000582653 URODP06132 367 aa22.63■■□□□ 1.21
SHMT1-209ENST00000582653 PDIA5Q14554 519 aa22.63■■□□□ 1.21
SHMT1-209ENST00000582653 IL17AQ16552 155 aa22.63■■□□□ 1.21
SHMT1-209ENST00000582653 FAM187BQ17R55 369 aa22.63■■□□□ 1.21
SHMT1-209ENST00000582653 HAUS3Q68CZ6 603 aa22.63■■□□□ 1.21
SHMT1-209ENST00000582653 CDCA2Q69YH5 1023 aaPredicted RBP22.63■■□□□ 1.21
SHMT1-209ENST00000582653 MCTP1Q6DN14 999 aa22.63■■□□□ 1.21
SHMT1-209ENST00000582653 PPP4R3CPQ6ZMV5 832 aa22.63■■□□□ 1.21
SHMT1-209ENST00000582653 ZBTB8OSQ8IWT0 167 aa22.63■■□□□ 1.21
SHMT1-209ENST00000582653 HERC2P3Q9BVR0 1158 aa22.63■■□□□ 1.21
SHMT1-209ENST00000582653 BHMT2Q9H2M3 363 aa22.63■■□□□ 1.21
SHMT1-209ENST00000582653 RXFP1Q9HBX9 757 aa22.63■■□□□ 1.21
SHMT1-209ENST00000582653 CHST7Q9NS84 486 aa22.63■■□□□ 1.21
SHMT1-209ENST00000582653 PRMT7Q9NVM4 692 aaPredicted RBP22.63■■□□□ 1.21
SHMT1-209ENST00000582653 ZNF318Q5VUA4 2279 aa22.62■■□□□ 1.21
SHMT1-209ENST00000582653 C2CD2LO14523 706 aa22.62■■□□□ 1.21
SHMT1-209ENST00000582653 LIG1P18858 919 aa22.62■■□□□ 1.21
SHMT1-209ENST00000582653 MUTP22033 750 aa22.62■■□□□ 1.21
SHMT1-209ENST00000582653 C15orf39Q6ZRI6 1047 aa22.62■■□□□ 1.21
SHMT1-209ENST00000582653 IGSF22Q8N9C0 903 aa22.62■■□□□ 1.21
SHMT1-209ENST00000582653 FEZF2Q8TBJ5 459 aa22.62■■□□□ 1.21
SHMT1-209ENST00000582653 SNX29Q8TEQ0 813 aa22.62■■□□□ 1.21
SHMT1-209ENST00000582653 DDX19AQ9NUU7 478 aaKnown RBP22.62■■□□□ 1.21
SHMT1-209ENST00000582653 PARP2Q9UGN5 583 aa22.62■■□□□ 1.21
SHMT1-209ENST00000582653 LIMD1Q9UGP4 676 aa22.62■■□□□ 1.21
SHMT1-209ENST00000582653 DPP7Q9UHL4 492 aa22.62■■□□□ 1.21
SHMT1-209ENST00000582653 BRD1O95696 1058 aa22.61■■□□□ 1.21
SHMT1-209ENST00000582653 C1RP00736 705 aa22.61■■□□□ 1.21
SHMT1-209ENST00000582653 EDN1P05305 212 aa22.61■■□□□ 1.21
SHMT1-209ENST00000582653 CDC25AP30304 524 aa22.61■■□□□ 1.21
SHMT1-209ENST00000582653 AVPR2P30518 371 aa22.61■■□□□ 1.21
SHMT1-209ENST00000582653 GLUD2P49448 558 aa22.61■■□□□ 1.21
SHMT1-209ENST00000582653 DSG1Q02413 1049 aa22.61■■□□□ 1.21
SHMT1-209ENST00000582653 MTMR3Q13615 1198 aa22.61■■□□□ 1.21
SHMT1-209ENST00000582653 TDRD5Q8NAT2 981 aaKnown RBP22.61■■□□□ 1.21
SHMT1-209ENST00000582653 PRSS33Q8NF86 280 aa22.61■■□□□ 1.21
SHMT1-209ENST00000582653 KIFC3Q9BVG8 833 aa22.61■■□□□ 1.21
SHMT1-209ENST00000582653 SPDYE4A6NLX3 237 aa22.6■■□□□ 1.21
SHMT1-209ENST00000582653 E9PMD0 336 aa22.6■■□□□ 1.21
SHMT1-209ENST00000582653 TEX28O15482 410 aa22.6■■□□□ 1.21
SHMT1-209ENST00000582653 ADH1AP07327 375 aa22.6■■□□□ 1.21
SHMT1-209ENST00000582653 GJB2P29033 226 aa22.6■■□□□ 1.21
SHMT1-209ENST00000582653 MRE11P49959 708 aa22.6■■□□□ 1.21
SHMT1-209ENST00000582653 PRPF4BQ13523 1007 aaKnown RBP22.6■■□□□ 1.21
SHMT1-209ENST00000582653 CYP26C1Q6V0L0 522 aa22.6■■□□□ 1.21
SHMT1-209ENST00000582653 GPR65Q8IYL9 337 aa22.6■■□□□ 1.21
SHMT1-209ENST00000582653 CMASQ8NFW8 434 aaPredicted RBP22.6■■□□□ 1.21
SHMT1-209ENST00000582653 DEPTORQ8TB45 409 aa22.6■■□□□ 1.21
SHMT1-209ENST00000582653 RABGGTAQ92696 567 aa22.6■■□□□ 1.21
SHMT1-209ENST00000582653 ACSF2Q96CM8 615 aaPredicted RBP22.6■■□□□ 1.21
SHMT1-209ENST00000582653 CCDC113Q9H0I3 377 aa22.6■■□□□ 1.21
SHMT1-209ENST00000582653 C2orf40Q9H1Z8 148 aa22.6■■□□□ 1.21
SHMT1-209ENST00000582653 PDZD7Q9H5P4 517 aa22.6■■□□□ 1.21
SHMT1-209ENST00000582653 EIF4ENIF1Q9NRA8 985 aaKnown RBP22.6■■□□□ 1.21
SHMT1-209ENST00000582653 DAXXQ9UER7 740 aaPredicted RBP22.6■■□□□ 1.21
SHMT1-209ENST00000582653 ZMYM2Q9UBW7 1377 aa22.6■■□□□ 1.21
SHMT1-209ENST00000582653 PRKCBP05771 671 aa22.59■■□□□ 1.21
SHMT1-209ENST00000582653 NAMPTP43490 491 aa22.59■■□□□ 1.21
SHMT1-209ENST00000582653 PTPN5P54829 565 aa22.59■■□□□ 1.21
SHMT1-209ENST00000582653 GRIK3Q13003 919 aa22.59■■□□□ 1.21
SHMT1-209ENST00000582653 MAPK6Q16659 721 aa22.59■■□□□ 1.21
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms