RNA–Protein interactions for RNA: ENST00000581832.1

SMARCD2-209, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 2, humanhuman

TSL 3

Gene SMARCD2, Length 562 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD2-209ENST00000581832 RNF168Q8IYW5 571 aaPredicted RBP13.65□□□□□ -0.22
SMARCD2-209ENST00000581832 MRPL43Q8N983 215 aaKnown RBP13.65□□□□□ -0.22
SMARCD2-209ENST00000581832 TMEM161BQ8NDZ6 487 aa13.65□□□□□ -0.22
SMARCD2-209ENST00000581832 URGCPQ8TCY9 931 aa13.65□□□□□ -0.22
SMARCD2-209ENST00000581832 SPIRE2Q8WWL2 714 aa13.65□□□□□ -0.22
SMARCD2-209ENST00000581832 DRC1Q96MC2 740 aa13.65□□□□□ -0.22
SMARCD2-209ENST00000581832 UHRF1Q96T88 793 aaPredicted RBP13.65□□□□□ -0.22
SMARCD2-209ENST00000581832 ACO2Q99798 780 aaKnown RBP13.65□□□□□ -0.22
SMARCD2-209ENST00000581832 TCF25Q9BQ70 676 aa13.65□□□□□ -0.22
SMARCD2-209ENST00000581832 TMEM175Q9BSA9 504 aa13.65□□□□□ -0.22
SMARCD2-209ENST00000581832 ZBP1Q9H171 429 aa13.65□□□□□ -0.22
SMARCD2-209ENST00000581832 NGRNQ9NPE2 291 aaKnown RBP13.65□□□□□ -0.22
SMARCD2-209ENST00000581832 TNFSF13BQ9Y275 285 aa13.65□□□□□ -0.22
SMARCD2-209ENST00000581832 RBM19Q9Y4C8 960 aaKnown RBP13.65□□□□□ -0.22
SMARCD2-209ENST00000581832 IRAK3Q9Y616 596 aa13.65□□□□□ -0.22
SMARCD2-209ENST00000581832 CARNS1A5YM72 827 aa13.64□□□□□ -0.23
SMARCD2-209ENST00000581832 C2orf71A6NGG8 1288 aa13.64□□□□□ -0.23
SMARCD2-209ENST00000581832 CCDC169A6NNP5 214 aa13.64□□□□□ -0.23
SMARCD2-209ENST00000581832 ALDH2P05091 517 aa13.64□□□□□ -0.23
SMARCD2-209ENST00000581832 PLS3P13797 630 aa13.64□□□□□ -0.23
SMARCD2-209ENST00000581832 IL9P15248 144 aa13.64□□□□□ -0.23
SMARCD2-209ENST00000581832 PROZP22891 400 aa13.64□□□□□ -0.23
SMARCD2-209ENST00000581832 DDIT3P35638 169 aa13.64□□□□□ -0.23
SMARCD2-209ENST00000581832 SCNN1GP51170 649 aa13.64□□□□□ -0.23
SMARCD2-209ENST00000581832 ZNF131P52739 623 aa13.64□□□□□ -0.23
SMARCD2-209ENST00000581832 RBM10P98175 930 aaKnown RBP13.64□□□□□ -0.23
SMARCD2-209ENST00000581832 CACNB1Q02641 598 aaPredicted RBP13.64□□□□□ -0.23
SMARCD2-209ENST00000581832 CEBPZQ03701 1054 aaKnown RBP13.64□□□□□ -0.23
SMARCD2-209ENST00000581832 PKP1Q13835 747 aa13.64□□□□□ -0.23
SMARCD2-209ENST00000581832 MCM6Q14566 821 aa13.64□□□□□ -0.23
SMARCD2-209ENST00000581832 NAB2Q15742 525 aa13.64□□□□□ -0.23
SMARCD2-209ENST00000581832 PLPP4Q5VZY2 271 aa13.64□□□□□ -0.23
SMARCD2-209ENST00000581832 TMEM184AQ6ZMB5 413 aa13.64□□□□□ -0.23
SMARCD2-209ENST00000581832 LINC00301Q8NCQ3 95 aa13.64□□□□□ -0.23
SMARCD2-209ENST00000581832 MICAL1Q8TDZ2 1067 aa13.64□□□□□ -0.23
SMARCD2-209ENST00000581832 RAD54LQ92698 747 aa13.64□□□□□ -0.23
SMARCD2-209ENST00000581832 CALML4Q96GE6 196 aa13.64□□□□□ -0.23
SMARCD2-209ENST00000581832 TMEM169Q96HH4 297 aa13.64□□□□□ -0.23
SMARCD2-209ENST00000581832 CDK5RAP3Q96JB5 506 aa13.64□□□□□ -0.23
SMARCD2-209ENST00000581832 FIZ1Q96SL8 496 aa13.64□□□□□ -0.23
SMARCD2-209ENST00000581832 CDCA3Q99618 268 aaPredicted RBP13.64□□□□□ -0.23
SMARCD2-209ENST00000581832 APOL6Q9BWW8 343 aa13.64□□□□□ -0.23
SMARCD2-209ENST00000581832 TRIM6Q9C030 488 aaPredicted RBP13.64□□□□□ -0.23
SMARCD2-209ENST00000581832 GBP3Q9H0R5 595 aa13.64□□□□□ -0.23
SMARCD2-209ENST00000581832 TLE6Q9H808 572 aa13.64□□□□□ -0.23
SMARCD2-209ENST00000581832 MARCH5Q9NX47 278 aa13.64□□□□□ -0.23
SMARCD2-209ENST00000581832 SNTG2Q9NY99 539 aa13.64□□□□□ -0.23
SMARCD2-209ENST00000581832 KLK14Q9P0G3 267 aa13.64□□□□□ -0.23
SMARCD2-209ENST00000581832 PHLPP2Q6ZVD8 1323 aa13.64□□□□□ -0.23
SMARCD2-209ENST00000581832 F8W810 466 aa13.63□□□□□ -0.23
SMARCD2-209ENST00000581832 PTGESO14684 152 aa13.63□□□□□ -0.23
SMARCD2-209ENST00000581832 SLC16A4O15374 487 aa13.63□□□□□ -0.23
SMARCD2-209ENST00000581832 LILRB3O75022 631 aa13.63□□□□□ -0.23
SMARCD2-209ENST00000581832 SSBP05455 408 aaKnown RBP eCLIP13.63□□□□□ -0.23
SMARCD2-209ENST00000581832 CTSAP10619 480 aa13.63□□□□□ -0.23
SMARCD2-209ENST00000581832 LIG1P18858 919 aa13.63□□□□□ -0.23
SMARCD2-209ENST00000581832 NCKAP1LP55160 1127 aa13.63□□□□□ -0.23
SMARCD2-209ENST00000581832 GIT2Q14161 759 aa13.63□□□□□ -0.23
SMARCD2-209ENST00000581832 ATF7IP2Q5U623 682 aa13.63□□□□□ -0.23
SMARCD2-209ENST00000581832 PTCRAQ6ISU1 281 aaPredicted RBP13.63□□□□□ -0.23
SMARCD2-209ENST00000581832 ALKAL1Q6UXT8 129 aa13.63□□□□□ -0.23
SMARCD2-209ENST00000581832 TMC7Q7Z402 723 aa13.63□□□□□ -0.23
SMARCD2-209ENST00000581832 FAM178BQ8IXR5 827 aa13.63□□□□□ -0.23
SMARCD2-209ENST00000581832 VPS52Q8N1B4 723 aa13.63□□□□□ -0.23
SMARCD2-209ENST00000581832 PPP2R3CQ969Q6 453 aa13.63□□□□□ -0.23
SMARCD2-209ENST00000581832 REEP2Q9BRK0 252 aa13.63□□□□□ -0.23
SMARCD2-209ENST00000581832 CD320Q9NPF0 282 aa13.63□□□□□ -0.23
SMARCD2-209ENST00000581832 KMT5AQ9NQR1 393 aa13.63□□□□□ -0.23
SMARCD2-209ENST00000581832 ENTPD7Q9NQZ7 604 aa13.63□□□□□ -0.23
SMARCD2-209ENST00000581832 DAXXQ9UER7 740 aaPredicted RBP13.63□□□□□ -0.23
SMARCD2-209ENST00000581832 PARP2Q9UGN5 583 aa13.63□□□□□ -0.23
SMARCD2-209ENST00000581832 ODF2LQ9ULJ1 636 aa13.63□□□□□ -0.23
SMARCD2-209ENST00000581832 FAN1Q9Y2M0 1017 aa13.63□□□□□ -0.23
SMARCD2-209ENST00000581832 TCHHQ07283 1943 aa13.62□□□□□ -0.23
SMARCD2-209ENST00000581832 A0A087X0B3 334 aa13.62□□□□□ -0.23
SMARCD2-209ENST00000581832 MEFVO15553 781 aaPredicted RBP13.62□□□□□ -0.23
SMARCD2-209ENST00000581832 MBTPS2O43462 519 aa13.62□□□□□ -0.23
SMARCD2-209ENST00000581832 RECQL4O94761 1208 aa13.62□□□□□ -0.23
SMARCD2-209ENST00000581832 BRD1O95696 1058 aa13.62□□□□□ -0.23
SMARCD2-209ENST00000581832 MAPTP10636 758 aaKnown RBP13.62□□□□□ -0.23
SMARCD2-209ENST00000581832 PDIA4P13667 645 aaKnown RBP13.62□□□□□ -0.23
SMARCD2-209ENST00000581832 COASYQ13057 564 aa13.62□□□□□ -0.23
SMARCD2-209ENST00000581832 PUS10Q3MIT2 529 aaKnown RBP13.62□□□□□ -0.23
SMARCD2-209ENST00000581832 DCAF4L1Q3SXM0 396 aa13.62□□□□□ -0.23
SMARCD2-209ENST00000581832 XKR4Q5GH76 650 aa13.62□□□□□ -0.23
SMARCD2-209ENST00000581832 EP400NLQ6ZTU2 488 aa13.62□□□□□ -0.23
SMARCD2-209ENST00000581832 TAS1R1Q7RTX1 841 aa13.62□□□□□ -0.23
SMARCD2-209ENST00000581832 GPBP1Q86WP2 473 aa13.62□□□□□ -0.23
SMARCD2-209ENST00000581832 HACE1Q8IYU2 909 aa13.62□□□□□ -0.23
SMARCD2-209ENST00000581832 SMRP1Q8NCR6 262 aa13.62□□□□□ -0.23
SMARCD2-209ENST00000581832 AUTS2Q8WXX7 1259 aa13.62□□□□□ -0.23
SMARCD2-209ENST00000581832 LARP4BQ92615 738 aaKnown RBP13.62□□□□□ -0.23
SMARCD2-209ENST00000581832 TARS2Q9BW92 718 aaKnown RBP13.62□□□□□ -0.23
SMARCD2-209ENST00000581832 TFIP11Q9UBB9 837 aaKnown RBP13.62□□□□□ -0.23
SMARCD2-209ENST00000581832 BARX2Q9UMQ3 279 aaPredicted RBP13.62□□□□□ -0.23
SMARCD2-209ENST00000581832 VWA8A3KMH1 1905 aa13.62□□□□□ -0.23
SMARCD2-209ENST00000581832 PDCD11Q14690 1871 aaKnown RBP13.61□□□□□ -0.23
SMARCD2-209ENST00000581832 TNFRSF10AO00220 468 aa13.61□□□□□ -0.23
SMARCD2-209ENST00000581832 CLASP2O75122 1294 aaKnown RBP13.61□□□□□ -0.23
SMARCD2-209ENST00000581832 CXCL14O95715 111 aa13.61□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms