RNA–Protein interactions for RNA: ENST00000581707.1

SREBF1-220, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

TSL 2

Gene SREBF1, Length 695 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-220ENST00000581707 COLGALT2Q8IYK4 626 aa21.48■■□□□ 1.03
SREBF1-220ENST00000581707 VN1R2Q8NFZ6 395 aa21.48■■□□□ 1.03
SREBF1-220ENST00000581707 ZBP1Q9H171 429 aa21.48■■□□□ 1.03
SREBF1-220ENST00000581707 KMT5AQ9NQR1 393 aa21.48■■□□□ 1.03
SREBF1-220ENST00000581707 KCND2Q9NZV8 630 aa21.48■■□□□ 1.03
SREBF1-220ENST00000581707 BARX2Q9UMQ3 279 aaPredicted RBP21.48■■□□□ 1.03
SREBF1-220ENST00000581707 RBM19Q9Y4C8 960 aaKnown RBP21.48■■□□□ 1.03
SREBF1-220ENST00000581707 MYH11P35749 1972 aa21.48■■□□□ 1.03
SREBF1-220ENST00000581707 ZMYM2Q9UBW7 1377 aa21.48■■□□□ 1.03
SREBF1-220ENST00000581707 SFI1A8K8P3 1242 aa21.47■■□□□ 1.03
SREBF1-220ENST00000581707 MBTPS2O43462 519 aa21.47■■□□□ 1.03
SREBF1-220ENST00000581707 STX6O43752 255 aa21.47■■□□□ 1.03
SREBF1-220ENST00000581707 CTSAP10619 480 aa21.47■■□□□ 1.03
SREBF1-220ENST00000581707 CA8P35219 290 aa21.47■■□□□ 1.03
SREBF1-220ENST00000581707 OR1G1P47890 313 aa21.47■■□□□ 1.03
SREBF1-220ENST00000581707 RBM10P98175 930 aaKnown RBP21.47■■□□□ 1.03
SREBF1-220ENST00000581707 DSC1Q08554 894 aa21.47■■□□□ 1.03
SREBF1-220ENST00000581707 RAD51AP2Q09MP3 1159 aa21.47■■□□□ 1.03
SREBF1-220ENST00000581707 COASYQ13057 564 aa21.47■■□□□ 1.03
SREBF1-220ENST00000581707 SMAD4Q13485 552 aaKnown RBP21.47■■□□□ 1.03
SREBF1-220ENST00000581707 PTPAQ15257 358 aa21.47■■□□□ 1.03
SREBF1-220ENST00000581707 NT5DC1Q5TFE4 455 aa21.47■■□□□ 1.03
SREBF1-220ENST00000581707 ATF7IP2Q5U623 682 aa21.47■■□□□ 1.03
SREBF1-220ENST00000581707 EEF1DP3Q658K8 133 aa21.47■■□□□ 1.03
SREBF1-220ENST00000581707 GSTCDQ8NEC7 633 aa21.47■■□□□ 1.03
SREBF1-220ENST00000581707 TMEM134Q9H6X4 195 aa21.47■■□□□ 1.03
SREBF1-220ENST00000581707 DAXXQ9UER7 740 aaPredicted RBP21.47■■□□□ 1.03
SREBF1-220ENST00000581707 STK39Q9UEW8 545 aa21.47■■□□□ 1.03
SREBF1-220ENST00000581707 NR1I2O75469 434 aa21.46■■□□□ 1.03
SREBF1-220ENST00000581707 SRGAP2BP0DMP2 458 aa21.46■■□□□ 1.03
SREBF1-220ENST00000581707 KCNC3Q14003 757 aa21.46■■□□□ 1.03
SREBF1-220ENST00000581707 SMAD2Q15796 467 aaKnown RBP21.46■■□□□ 1.03
SREBF1-220ENST00000581707 TMEM184AQ6ZMB5 413 aa21.46■■□□□ 1.03
SREBF1-220ENST00000581707 HSCBQ8IWL3 235 aa21.46■■□□□ 1.03
SREBF1-220ENST00000581707 RASSF8Q8NHQ8 419 aa21.46■■□□□ 1.03
SREBF1-220ENST00000581707 AUTS2Q8WXX7 1259 aa21.46■■□□□ 1.03
SREBF1-220ENST00000581707 RPS6KC1Q96S38 1066 aa21.46■■□□□ 1.03
SREBF1-220ENST00000581707 VN1R3Q9BXE9 311 aa21.46■■□□□ 1.03
SREBF1-220ENST00000581707 ZSCAN16Q9H4T2 348 aaPredicted RBP21.46■■□□□ 1.03
SREBF1-220ENST00000581707 SNTG2Q9NY99 539 aa21.46■■□□□ 1.03
SREBF1-220ENST00000581707 ARHGAP28Q9P2N2 729 aa21.46■■□□□ 1.03
SREBF1-220ENST00000581707 KCNG1Q9UIX4 513 aa21.46■■□□□ 1.03
SREBF1-220ENST00000581707 PRG3Q9Y2Y8 225 aaPredicted RBP21.46■■□□□ 1.03
SREBF1-220ENST00000581707 PHLPP2Q6ZVD8 1323 aa21.46■■□□□ 1.03
SREBF1-220ENST00000581707 C5orf42Q9H799 3197 aa21.46■■□□□ 1.03
SREBF1-220ENST00000581707 SLC16A4O15374 487 aa21.45■■□□□ 1.02
SREBF1-220ENST00000581707 PLS3P13797 630 aa21.45■■□□□ 1.02
SREBF1-220ENST00000581707 MARCKSP29966 332 aaPredicted RBP21.45■■□□□ 1.02
SREBF1-220ENST00000581707 GRIK3Q13003 919 aa21.45■■□□□ 1.02
SREBF1-220ENST00000581707 GIT2Q14161 759 aa21.45■■□□□ 1.02
SREBF1-220ENST00000581707 KARSQ15046 597 aaKnown RBP21.45■■□□□ 1.02
SREBF1-220ENST00000581707 DCAF4L1Q3SXM0 396 aa21.45■■□□□ 1.02
SREBF1-220ENST00000581707 ARSHQ5FYA8 562 aa21.45■■□□□ 1.02
SREBF1-220ENST00000581707 LLGL2Q6P1M3 1020 aa21.45■■□□□ 1.02
SREBF1-220ENST00000581707 APBB1IPQ7Z5R6 666 aaPredicted RBP21.45■■□□□ 1.02
SREBF1-220ENST00000581707 TMEM87AQ8NBN3 555 aa21.45■■□□□ 1.02
SREBF1-220ENST00000581707 SMRP1Q8NCR6 262 aa21.45■■□□□ 1.02
SREBF1-220ENST00000581707 SPIRE2Q8WWL2 714 aa21.45■■□□□ 1.02
SREBF1-220ENST00000581707 NTPCRQ9BSD7 190 aaKnown RBP21.45■■□□□ 1.02
SREBF1-220ENST00000581707 CD320Q9NPF0 282 aa21.45■■□□□ 1.02
SREBF1-220ENST00000581707 PRKAG3Q9UGI9 489 aa21.45■■□□□ 1.02
SREBF1-220ENST00000581707 IRAK3Q9Y616 596 aa21.45■■□□□ 1.02
SREBF1-220ENST00000581707 NPHP3-ACAD11A0A0J9YXS1 232 aa21.44■■□□□ 1.02
SREBF1-220ENST00000581707 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP21.44■■□□□ 1.02
SREBF1-220ENST00000581707 CLASP2O75122 1294 aaKnown RBP21.44■■□□□ 1.02
SREBF1-220ENST00000581707 RECQL4O94761 1208 aa21.44■■□□□ 1.02
SREBF1-220ENST00000581707 PLCG1P19174 1290 aa21.44■■□□□ 1.02
SREBF1-220ENST00000581707 SMTNP53814 917 aa21.44■■□□□ 1.02
SREBF1-220ENST00000581707 CEBPZQ03701 1054 aaKnown RBP21.44■■□□□ 1.02
SREBF1-220ENST00000581707 DHX8Q14562 1220 aaKnown RBP21.44■■□□□ 1.02
SREBF1-220ENST00000581707 GJD3Q8N144 294 aa21.44■■□□□ 1.02
SREBF1-220ENST00000581707 LRRC15Q8TF66 581 aa21.44■■□□□ 1.02
SREBF1-220ENST00000581707 ACO2Q99798 780 aaKnown RBP21.44■■□□□ 1.02
SREBF1-220ENST00000581707 COLEC11Q9BWP8 271 aa21.44■■□□□ 1.02
SREBF1-220ENST00000581707 MRPL4Q9BYD3 311 aaKnown RBP21.44■■□□□ 1.02
SREBF1-220ENST00000581707 CCSER1Q9C0I3 900 aa21.44■■□□□ 1.02
SREBF1-220ENST00000581707 BLOC1S4Q9NUP1 217 aa21.44■■□□□ 1.02
SREBF1-220ENST00000581707 MARCH5Q9NX47 278 aa21.44■■□□□ 1.02
SREBF1-220ENST00000581707 TNFSF13BQ9Y275 285 aa21.44■■□□□ 1.02
SREBF1-220ENST00000581707 SRPRBQ9Y5M8 271 aaKnown RBP21.44■■□□□ 1.02
SREBF1-220ENST00000581707 SSTR3P32745 418 aaPredicted RBP21.43■■□□□ 1.02
SREBF1-220ENST00000581707 TAS1R3Q7RTX0 852 aa21.43■■□□□ 1.02
SREBF1-220ENST00000581707 GPBP1Q86WP2 473 aa21.43■■□□□ 1.02
SREBF1-220ENST00000581707 ADHFE1Q8IWW8 467 aa21.43■■□□□ 1.02
SREBF1-220ENST00000581707 EPSTI1Q96J88 318 aa21.43■■□□□ 1.02
SREBF1-220ENST00000581707 FBXO2Q9UK22 296 aaPredicted RBP21.43■■□□□ 1.02
SREBF1-220ENST00000581707 GDAQ9Y2T3 454 aa21.43■■□□□ 1.02
SREBF1-220ENST00000581707 HSP90AA1P07900 732 aaKnown RBP21.42■■□□□ 1.02
SREBF1-220ENST00000581707 CACNB1Q02641 598 aaPredicted RBP21.42■■□□□ 1.02
SREBF1-220ENST00000581707 ZP2Q05996 745 aa21.42■■□□□ 1.02
SREBF1-220ENST00000581707 MCM6Q14566 821 aa21.42■■□□□ 1.02
SREBF1-220ENST00000581707 PTPN14Q15678 1187 aa21.42■■□□□ 1.02
SREBF1-220ENST00000581707 SPECC1Q5M775 1068 aa21.42■■□□□ 1.02
SREBF1-220ENST00000581707 ANKRD54Q6NXT1 300 aa21.42■■□□□ 1.02
SREBF1-220ENST00000581707 USP49Q70CQ1 688 aa21.42■■□□□ 1.02
SREBF1-220ENST00000581707 RAD54LQ92698 747 aa21.42■■□□□ 1.02
SREBF1-220ENST00000581707 CASP10Q92851 521 aa21.42■■□□□ 1.02
SREBF1-220ENST00000581707 USP28Q96RU2 1077 aa21.42■■□□□ 1.02
SREBF1-220ENST00000581707 TARS2Q9BW92 718 aaKnown RBP21.42■■□□□ 1.02
SREBF1-220ENST00000581707 LARSQ9P2J5 1176 aaKnown RBP21.42■■□□□ 1.02
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms