RNA–Protein interactions for RNA: ENST00000581525.1

SNORD55-201, Transcript of small nucleolar RNA, C/D box 55, humanhuman

BASIC

Gene SNORD55, Length 80 nt, Biotype snoRNA, Subcellular localisation Cytoplasm, Exosome, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNORD55-201ENST00000581525 PANK2Q9BZ23 570 aa13.88□□□□□ -0.19
SNORD55-201ENST00000581525 TRIM6Q9C030 488 aaPredicted RBP13.88□□□□□ -0.19
SNORD55-201ENST00000581525 SCAND2PQ9GZW5 306 aaPredicted RBP13.88□□□□□ -0.19
SNORD55-201ENST00000581525 TNMDQ9H2S6 317 aa13.88□□□□□ -0.19
SNORD55-201ENST00000581525 ALG13Q9NP73 1137 aaKnown RBP13.88□□□□□ -0.19
SNORD55-201ENST00000581525 OLFML3Q9NRN5 406 aa13.88□□□□□ -0.19
SNORD55-201ENST00000581525 SPG21Q9NZD8 308 aa13.88□□□□□ -0.19
SNORD55-201ENST00000581525 USP20Q9Y2K6 914 aa13.88□□□□□ -0.19
SNORD55-201ENST00000581525 HES2Q9Y543 173 aa13.88□□□□□ -0.19
SNORD55-201ENST00000581525 FAM13AO94988 1023 aa13.87□□□□□ -0.19
SNORD55-201ENST00000581525 ALDH2P05091 517 aa13.87□□□□□ -0.19
SNORD55-201ENST00000581525 MCF2P10911 925 aa13.87□□□□□ -0.19
SNORD55-201ENST00000581525 GAP43P17677 238 aa13.87□□□□□ -0.19
SNORD55-201ENST00000581525 GRM5P41594 1212 aa13.87□□□□□ -0.19
SNORD55-201ENST00000581525 STAT6P42226 847 aa13.87□□□□□ -0.19
SNORD55-201ENST00000581525 ME1P48163 572 aa13.87□□□□□ -0.19
SNORD55-201ENST00000581525 ALDH7A1P49419 539 aaKnown RBP13.87□□□□□ -0.19
SNORD55-201ENST00000581525 CACNB1Q02641 598 aaPredicted RBP13.87□□□□□ -0.19
SNORD55-201ENST00000581525 MCL1Q07820 350 aa13.87□□□□□ -0.19
SNORD55-201ENST00000581525 CTC1Q2NKJ3 1217 aa13.87□□□□□ -0.19
SNORD55-201ENST00000581525 FOXD4L6Q3SYB3 417 aaPredicted RBP13.87□□□□□ -0.19
SNORD55-201ENST00000581525 TIGD5Q53EQ6 642 aa13.87□□□□□ -0.19
SNORD55-201ENST00000581525 FOXD4L3Q6VB84 417 aaPredicted RBP13.87□□□□□ -0.19
SNORD55-201ENST00000581525 MAP4K3Q8IVH8 894 aa13.87□□□□□ -0.19
SNORD55-201ENST00000581525 COLGALT2Q8IYK4 626 aa13.87□□□□□ -0.19
SNORD55-201ENST00000581525 MYCT1Q8N699 235 aa13.87□□□□□ -0.19
SNORD55-201ENST00000581525 RASSF8Q8NHQ8 419 aa13.87□□□□□ -0.19
SNORD55-201ENST00000581525 URGCPQ8TCY9 931 aa13.87□□□□□ -0.19
SNORD55-201ENST00000581525 POF1BQ8WVV4 589 aa13.87□□□□□ -0.19
SNORD55-201ENST00000581525 GAD1Q99259 594 aa13.87□□□□□ -0.19
SNORD55-201ENST00000581525 TARS2Q9BW92 718 aaKnown RBP13.87□□□□□ -0.19
SNORD55-201ENST00000581525 LRRC27Q9C0I9 530 aa13.87□□□□□ -0.19
SNORD55-201ENST00000581525 CDT1Q9H211 546 aa13.87□□□□□ -0.19
SNORD55-201ENST00000581525 NSUN3Q9H649 340 aaKnown RBP13.87□□□□□ -0.19
SNORD55-201ENST00000581525 MAGEF1Q9HAY2 307 aa13.87□□□□□ -0.19
SNORD55-201ENST00000581525 STK39Q9UEW8 545 aa13.87□□□□□ -0.19
SNORD55-201ENST00000581525 COG5Q9UP83 839 aa13.87□□□□□ -0.19
SNORD55-201ENST00000581525 HPSEQ9Y251 543 aa13.87□□□□□ -0.19
SNORD55-201ENST00000581525 IRAK3Q9Y616 596 aa13.87□□□□□ -0.19
SNORD55-201ENST00000581525 COL4A4P53420 1690 aaPredicted RBP13.87□□□□□ -0.19
SNORD55-201ENST00000581525 KIAA1671Q9BY89 1806 aa13.86□□□□□ -0.19
SNORD55-201ENST00000581525 NCK2O43639 380 aa13.86□□□□□ -0.19
SNORD55-201ENST00000581525 ADRB2P07550 413 aa13.86□□□□□ -0.19
SNORD55-201ENST00000581525 IBSPP21815 317 aaPredicted RBP13.86□□□□□ -0.19
SNORD55-201ENST00000581525 AKAP5P24588 427 aa13.86□□□□□ -0.19
SNORD55-201ENST00000581525 STRN3Q13033 797 aa13.86□□□□□ -0.19
SNORD55-201ENST00000581525 LONRF3Q496Y0 759 aa13.86□□□□□ -0.19
SNORD55-201ENST00000581525 SPOUT1Q5T280 376 aaKnown RBP13.86□□□□□ -0.19
SNORD55-201ENST00000581525 MPZL3Q6UWV2 235 aa13.86□□□□□ -0.19
SNORD55-201ENST00000581525 APBB1IPQ7Z5R6 666 aaPredicted RBP13.86□□□□□ -0.19
SNORD55-201ENST00000581525 DDX53Q86TM3 631 aaKnown RBP13.86□□□□□ -0.19
SNORD55-201ENST00000581525 RNF168Q8IYW5 571 aaPredicted RBP13.86□□□□□ -0.19
SNORD55-201ENST00000581525 ATXN2LQ8WWM7 1075 aaKnown RBP13.86□□□□□ -0.19
SNORD55-201ENST00000581525 HVCN1Q96D96 273 aa13.86□□□□□ -0.19
SNORD55-201ENST00000581525 IGSF21Q96ID5 467 aa13.86□□□□□ -0.19
SNORD55-201ENST00000581525 ZFP42Q96MM3 310 aa13.86□□□□□ -0.19
SNORD55-201ENST00000581525 C7orf25Q9BPX7 421 aa13.86□□□□□ -0.19
SNORD55-201ENST00000581525 PYM1Q9BRP8 204 aaKnown RBP13.86□□□□□ -0.19
SNORD55-201ENST00000581525 HAPLN2Q9GZV7 340 aa13.86□□□□□ -0.19
SNORD55-201ENST00000581525 SNTG2Q9NY99 539 aa13.86□□□□□ -0.19
SNORD55-201ENST00000581525 DNAJB4Q9UDY4 337 aa13.86□□□□□ -0.19
SNORD55-201ENST00000581525 TBX20Q9UMR3 447 aa13.86□□□□□ -0.19
SNORD55-201ENST00000581525 STYXL1Q9Y6J8 313 aa13.86□□□□□ -0.19
SNORD55-201ENST00000581525 VCANP13611 3396 aa13.85□□□□□ -0.19
SNORD55-201ENST00000581525 A0A1W2PQ27 194 aa13.85□□□□□ -0.19
SNORD55-201ENST00000581525 A0A1W2PQ64 194 aa13.85□□□□□ -0.19
SNORD55-201ENST00000581525 A0A1W2PQD8 194 aa13.85□□□□□ -0.19
SNORD55-201ENST00000581525 PTGESO14684 152 aa13.85□□□□□ -0.19
SNORD55-201ENST00000581525 NRP1O14786 923 aa13.85□□□□□ -0.19
SNORD55-201ENST00000581525 POLR2DO15514 142 aaKnown RBP13.85□□□□□ -0.19
SNORD55-201ENST00000581525 POMCP01189 267 aa13.85□□□□□ -0.19
SNORD55-201ENST00000581525 MLH1P40692 756 aa13.85□□□□□ -0.19
SNORD55-201ENST00000581525 SLC11A1P49279 550 aa13.85□□□□□ -0.19
SNORD55-201ENST00000581525 SCNN1GP51170 649 aa13.85□□□□□ -0.19
SNORD55-201ENST00000581525 ERVFC1P60507 584 aa13.85□□□□□ -0.19
SNORD55-201ENST00000581525 AMPD3Q01432 767 aa13.85□□□□□ -0.19
SNORD55-201ENST00000581525 POU5F1Q01860 360 aaKnown RBP13.85□□□□□ -0.19
SNORD55-201ENST00000581525 KRT17Q04695 432 aa13.85□□□□□ -0.19
SNORD55-201ENST00000581525 EHHADHQ08426 723 aa13.85□□□□□ -0.19
SNORD55-201ENST00000581525 GRIK3Q13003 919 aa13.85□□□□□ -0.19
SNORD55-201ENST00000581525 CCDC85BQ15834 202 aaPredicted RBP13.85□□□□□ -0.19
SNORD55-201ENST00000581525 DYMQ7RTS9 669 aa13.85□□□□□ -0.19
SNORD55-201ENST00000581525 FAM178BQ8IXR5 827 aa13.85□□□□□ -0.19
SNORD55-201ENST00000581525 GPR65Q8IYL9 337 aa13.85□□□□□ -0.19
SNORD55-201ENST00000581525 THNSL1Q8IYQ7 743 aa13.85□□□□□ -0.19
SNORD55-201ENST00000581525 PDILTQ8N807 584 aa13.85□□□□□ -0.19
SNORD55-201ENST00000581525 ZBTB45Q96K62 511 aaPredicted RBP13.85□□□□□ -0.19
SNORD55-201ENST00000581525 SPATA32Q96LK8 384 aa13.85□□□□□ -0.19
SNORD55-201ENST00000581525 TRIM9Q9C026 710 aa13.85□□□□□ -0.19
SNORD55-201ENST00000581525 NGRNQ9NPE2 291 aaKnown RBP13.85□□□□□ -0.19
SNORD55-201ENST00000581525 FAM13BQ9NYF5 915 aa13.85□□□□□ -0.19
SNORD55-201ENST00000581525 PUF60Q9UHX1 559 aaKnown RBP13.85□□□□□ -0.19
SNORD55-201ENST00000581525 FAM189A1O60320 539 aa13.84□□□□□ -0.19
SNORD55-201ENST00000581525 LILRB3O75022 631 aa13.84□□□□□ -0.19
SNORD55-201ENST00000581525 ZC3H11AO75152 810 aaKnown RBP eCLIP13.84□□□□□ -0.19
SNORD55-201ENST00000581525 TBCAO75347 108 aaKnown RBP13.84□□□□□ -0.19
SNORD55-201ENST00000581525 RECQL4O94761 1208 aa13.84□□□□□ -0.19
SNORD55-201ENST00000581525 KRT18P05783 430 aaKnown RBP13.84□□□□□ -0.19
SNORD55-201ENST00000581525 SLFN14P0C7P3 912 aa13.84□□□□□ -0.19
SNORD55-201ENST00000581525 KCNE1P15382 129 aa13.84□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 52.4 ms