RNA–Protein interactions for RNA: ENST00000580670.6

CDK5RAP3-219, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 5

Gene CDK5RAP3, Length 1,768 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-219ENST00000580670 SNX17Q15036 470 aa15.08■□□□□ 0.01
CDK5RAP3-219ENST00000580670 FKBP15Q5T1M5 1219 aa15.08■□□□□ 0.01
CDK5RAP3-219ENST00000580670 MPZL3Q6UWV2 235 aa15.08■□□□□ 0.01
CDK5RAP3-219ENST00000580670 INTS8Q75QN2 995 aaKnown RBP15.08■□□□□ 0.01
CDK5RAP3-219ENST00000580670 RPAINQ86UA6 219 aa15.08■□□□□ 0.01
CDK5RAP3-219ENST00000580670 U2AF1L4Q8WU68 220 aaKnown RBP15.08■□□□□ 0.01
CDK5RAP3-219ENST00000580670 FBXL18Q96ME1 805 aa15.08■□□□□ 0.01
CDK5RAP3-219ENST00000580670 KIAA1586Q9HCI6 787 aa15.08■□□□□ 0.01
CDK5RAP3-219ENST00000580670 TNFSF13BQ9Y275 285 aa15.08■□□□□ 0.01
CDK5RAP3-219ENST00000580670 TRPV2Q9Y5S1 764 aa15.08■□□□□ 0.01
CDK5RAP3-219ENST00000580670 CDY2AQ9Y6F7 541 aa15.08■□□□□ 0.01
CDK5RAP3-219ENST00000580670 ABLIM1O14639 778 aa15.08■□□□□ 0
CDK5RAP3-219ENST00000580670 SGPL1O95470 568 aa15.08■□□□□ 0
CDK5RAP3-219ENST00000580670 PTMAP06454 111 aaKnown RBP15.08■□□□□ 0
CDK5RAP3-219ENST00000580670 CTSHP09668 335 aa15.08■□□□□ 0
CDK5RAP3-219ENST00000580670 ARF4P18085 180 aaPredicted RBP15.08■□□□□ 0
CDK5RAP3-219ENST00000580670 PROZP22891 400 aa15.08■□□□□ 0
CDK5RAP3-219ENST00000580670 THPOP40225 353 aa15.08■□□□□ 0
CDK5RAP3-219ENST00000580670 MCL1Q07820 350 aa15.08■□□□□ 0
CDK5RAP3-219ENST00000580670 KCNH2Q12809 1159 aa15.08■□□□□ 0
CDK5RAP3-219ENST00000580670 BFSP1Q12934 665 aa15.08■□□□□ 0
CDK5RAP3-219ENST00000580670 NOLC1Q14978 699 aaKnown RBP eCLIP15.08■□□□□ 0
CDK5RAP3-219ENST00000580670 ZNF568Q3ZCX4 644 aa15.08■□□□□ 0
CDK5RAP3-219ENST00000580670 EEF1DP3Q658K8 133 aa15.08■□□□□ 0
CDK5RAP3-219ENST00000580670 CATSPER4Q7RTX7 472 aa15.08■□□□□ 0
CDK5RAP3-219ENST00000580670 CDR2LQ86X02 465 aaPredicted RBP15.08■□□□□ 0
CDK5RAP3-219ENST00000580670 TMEM40Q8WWA1 233 aa15.08■□□□□ 0
CDK5RAP3-219ENST00000580670 CPB2Q96IY4 423 aa15.08■□□□□ 0
CDK5RAP3-219ENST00000580670 CRISPLD2Q9H0B8 497 aa15.08■□□□□ 0
CDK5RAP3-219ENST00000580670 PTPRHQ9HD43 1115 aa15.08■□□□□ 0
CDK5RAP3-219ENST00000580670 TULP1O00294 542 aaPredicted RBP15.07■□□□□ 0
CDK5RAP3-219ENST00000580670 B4GALT4O60513 344 aa15.07■□□□□ 0
CDK5RAP3-219ENST00000580670 LDHAP00338 332 aaKnown RBP15.07■□□□□ 0
CDK5RAP3-219ENST00000580670 AFPP02771 609 aaKnown RBP15.07■□□□□ 0
CDK5RAP3-219ENST00000580670 SFPQP23246 707 aaKnown RBP eCLIP15.07■□□□□ 0
CDK5RAP3-219ENST00000580670 PBX1P40424 430 aa15.07■□□□□ 0
CDK5RAP3-219ENST00000580670 ACOT2P49753 483 aa15.07■□□□□ 0
CDK5RAP3-219ENST00000580670 VAMP7P51809 220 aa15.07■□□□□ 0
CDK5RAP3-219ENST00000580670 PCBP1Q15365 356 aaKnown RBP eCLIP15.07■□□□□ 0
CDK5RAP3-219ENST00000580670 SLC35C1Q96A29 364 aa15.07■□□□□ 0
CDK5RAP3-219ENST00000580670 SEZ6LQ9BYH1 1024 aa15.07■□□□□ 0
CDK5RAP3-219ENST00000580670 TRPV6Q9H1D0 765 aa15.07■□□□□ 0
CDK5RAP3-219ENST00000580670 PDZD7Q9H5P4 517 aa15.07■□□□□ 0
CDK5RAP3-219ENST00000580670 DNAH12Q6ZR08 3092 aa15.07■□□□□ 0
CDK5RAP3-219ENST00000580670 ZNF233A6NK53 670 aa15.06■□□□□ 0
CDK5RAP3-219ENST00000580670 GOLGA6L6A8MZA4 724 aa15.06■□□□□ 0
CDK5RAP3-219ENST00000580670 TRIM49P0CI25 452 aa15.06■□□□□ 0
CDK5RAP3-219ENST00000580670 TRIM49CP0CI26 452 aa15.06■□□□□ 0
CDK5RAP3-219ENST00000580670 CYP24A1Q07973 514 aa15.06■□□□□ 0
CDK5RAP3-219ENST00000580670 NCBP1Q09161 790 aaKnown RBP15.06■□□□□ 0
CDK5RAP3-219ENST00000580670 SPECC1LQ69YQ0 1117 aa15.06■□□□□ 0
CDK5RAP3-219ENST00000580670 DHX38Q92620 1227 aaKnown RBP15.06■□□□□ 0
CDK5RAP3-219ENST00000580670 MFSD14AQ96MC6 490 aa15.06■□□□□ 0
CDK5RAP3-219ENST00000580670 A0A1W2PQC6 194 aa15.06■□□□□ 0
CDK5RAP3-219ENST00000580670 OGTO15294 1046 aa15.06■□□□□ 0
CDK5RAP3-219ENST00000580670 CHRNA1P02708 482 aa15.06■□□□□ 0
CDK5RAP3-219ENST00000580670 CDK7P50613 346 aa15.06■□□□□ 0
CDK5RAP3-219ENST00000580670 MGAT3Q09327 533 aa15.06■□□□□ 0
CDK5RAP3-219ENST00000580670 SYCP1Q15431 976 aa15.06■□□□□ 0
CDK5RAP3-219ENST00000580670 TRIM71Q2Q1W2 868 aaKnown RBP15.06■□□□□ 0
CDK5RAP3-219ENST00000580670 SEZ6Q53EL9 994 aa15.06■□□□□ 0
CDK5RAP3-219ENST00000580670 ZBTB41Q5SVQ8 909 aa15.06■□□□□ 0
CDK5RAP3-219ENST00000580670 CRELD2Q6UXH1 353 aaPredicted RBP15.06■□□□□ 0
CDK5RAP3-219ENST00000580670 CCDC155Q8N6L0 562 aa15.06■□□□□ 0
CDK5RAP3-219ENST00000580670 PLEKHO2Q8TD55 490 aa15.06■□□□□ 0
CDK5RAP3-219ENST00000580670 SENP6Q9GZR1 1112 aaPredicted RBP15.06■□□□□ 0
CDK5RAP3-219ENST00000580670 CDT1Q9H211 546 aa15.06■□□□□ 0
CDK5RAP3-219ENST00000580670 UQCRHLA0A096LP55 91 aa15.05■□□□□ -0
CDK5RAP3-219ENST00000580670 A0A1B0GUA9 196 aa15.05■□□□□ -0
CDK5RAP3-219ENST00000580670 FAM189A1O60320 539 aa15.05■□□□□ -0
CDK5RAP3-219ENST00000580670 UQCRHP07919 91 aa15.05■□□□□ -0
CDK5RAP3-219ENST00000580670 DLG4P78352 724 aa15.05■□□□□ -0
CDK5RAP3-219ENST00000580670 CCDC127Q96BQ5 260 aa15.05■□□□□ -0
CDK5RAP3-219ENST00000580670 PCMTD1Q96MG8 357 aaPredicted RBP15.05■□□□□ -0
CDK5RAP3-219ENST00000580670 ERGIC2Q96RQ1 377 aa15.05■□□□□ -0
CDK5RAP3-219ENST00000580670 ADPGKQ9BRR6 497 aa15.05■□□□□ -0
CDK5RAP3-219ENST00000580670 MMRN2Q9H8L6 949 aa15.05■□□□□ -0
CDK5RAP3-219ENST00000580670 IMPACTQ9P2X3 320 aa15.05■□□□□ -0
CDK5RAP3-219ENST00000580670 NOC2LQ9Y3T9 749 aaKnown RBP15.05■□□□□ -0
CDK5RAP3-219ENST00000580670 MCF2P10911 925 aa15.04■□□□□ -0
CDK5RAP3-219ENST00000580670 AXLP30530 894 aa15.04■□□□□ -0
CDK5RAP3-219ENST00000580670 HOXA11P31270 313 aaPredicted RBP15.04■□□□□ -0
CDK5RAP3-219ENST00000580670 TNFSF9P41273 254 aa15.04■□□□□ -0
CDK5RAP3-219ENST00000580670 MNX1P50219 401 aaPredicted RBP15.04■□□□□ -0
CDK5RAP3-219ENST00000580670 NOTUMQ6P988 496 aa15.04■□□□□ -0
CDK5RAP3-219ENST00000580670 USP37Q86T82 979 aa15.04■□□□□ -0
CDK5RAP3-219ENST00000580670 THNSL1Q8IYQ7 743 aa15.04■□□□□ -0
CDK5RAP3-219ENST00000580670 TMC2Q8TDI7 906 aa15.04■□□□□ -0
CDK5RAP3-219ENST00000580670 PARD3BQ8TEW8 1205 aa15.04■□□□□ -0
CDK5RAP3-219ENST00000580670 AGPAT5Q9NUQ2 364 aa15.04■□□□□ -0
CDK5RAP3-219ENST00000580670 RBAKQ9NYW8 714 aaPredicted RBP15.04■□□□□ -0
CDK5RAP3-219ENST00000580670 ITIH6Q6UXX5 1313 aa15.04■□□□□ -0
CDK5RAP3-219ENST00000580670 CAND2O75155 1236 aa15.03■□□□□ -0
CDK5RAP3-219ENST00000580670 RPS6KA5O75582 802 aa15.03■□□□□ -0
CDK5RAP3-219ENST00000580670 DLATP10515 647 aaKnown RBP15.03■□□□□ -0
CDK5RAP3-219ENST00000580670 GJA8P48165 433 aa15.03■□□□□ -0
CDK5RAP3-219ENST00000580670 FMO5P49326 533 aa15.03■□□□□ -0
CDK5RAP3-219ENST00000580670 KLK7P49862 253 aa15.03■□□□□ -0
CDK5RAP3-219ENST00000580670 MCCD1P59942 119 aaPredicted RBP15.03■□□□□ -0
CDK5RAP3-219ENST00000580670 PSMD6Q15008 389 aa15.03■□□□□ -0
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms