RNA–Protein interactions for RNA: ENST00000580646.5

GGA3-209, Transcript of golgi associated, gamma adaptin ear containing, ARF binding protein 3, humanhuman

TSL 4

Gene GGA3, Length 829 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGA3-209ENST00000580646 MAPK6Q16659 721 aa10.87□□□□□ -0.67
GGA3-209ENST00000580646 AMHR2Q16671 573 aa10.87□□□□□ -0.67
GGA3-209ENST00000580646 LEXMQ3ZCV2 418 aa10.87□□□□□ -0.67
GGA3-209ENST00000580646 LONRF3Q496Y0 759 aa10.87□□□□□ -0.67
GGA3-209ENST00000580646 TWF2Q6IBS0 349 aaKnown RBP10.87□□□□□ -0.67
GGA3-209ENST00000580646 LRRC55Q6ZSA7 311 aa10.87□□□□□ -0.67
GGA3-209ENST00000580646 DYMQ7RTS9 669 aa10.87□□□□□ -0.67
GGA3-209ENST00000580646 ZNF598Q86UK7 904 aaKnown RBP10.87□□□□□ -0.67
GGA3-209ENST00000580646 FAM178BQ8IXR5 827 aa10.87□□□□□ -0.67
GGA3-209ENST00000580646 CCDC65Q8IXS2 484 aa10.87□□□□□ -0.67
GGA3-209ENST00000580646 ABI1Q8IZP0 508 aa10.87□□□□□ -0.67
GGA3-209ENST00000580646 COLGALT1Q8NBJ5 622 aa10.87□□□□□ -0.67
GGA3-209ENST00000580646 TMEM161BQ8NDZ6 487 aa10.87□□□□□ -0.67
GGA3-209ENST00000580646 CNNM3Q8NE01 707 aa10.87□□□□□ -0.67
GGA3-209ENST00000580646 GADD45GIP1Q8TAE8 222 aaPredicted RBP10.87□□□□□ -0.67
GGA3-209ENST00000580646 RSPH1Q8WYR4 309 aa10.87□□□□□ -0.67
GGA3-209ENST00000580646 PAGE5Q96GU1 130 aa10.87□□□□□ -0.67
GGA3-209ENST00000580646 FIZ1Q96SL8 496 aa10.87□□□□□ -0.67
GGA3-209ENST00000580646 CWH43Q9H720 699 aa10.87□□□□□ -0.67
GGA3-209ENST00000580646 HCSTQ9UBK5 93 aa10.87□□□□□ -0.67
GGA3-209ENST00000580646 PIN4Q9Y237 131 aaKnown RBP10.87□□□□□ -0.67
GGA3-209ENST00000580646 TDRD15B5MCY1 1934 aaKnown RBP10.87□□□□□ -0.67
GGA3-209ENST00000580646 PDCD11Q14690 1871 aaKnown RBP10.87□□□□□ -0.67
GGA3-209ENST00000580646 TRIP11Q15643 1979 aa10.86□□□□□ -0.67
GGA3-209ENST00000580646 MYO7AQ13402 2215 aa10.86□□□□□ -0.67
GGA3-209ENST00000580646 REV3LO60673 3130 aa10.86□□□□□ -0.67
GGA3-209ENST00000580646 A0A1B0GUA9 196 aa10.86□□□□□ -0.67
GGA3-209ENST00000580646 CCDC169A6NNP5 214 aa10.86□□□□□ -0.67
GGA3-209ENST00000580646 SFI1A8K8P3 1242 aa10.86□□□□□ -0.67
GGA3-209ENST00000580646 GOLGA6L22H0YM25 854 aa10.86□□□□□ -0.67
GGA3-209ENST00000580646 H3BQ06 376 aaPredicted RBP10.86□□□□□ -0.67
GGA3-209ENST00000580646 K7ERI5 159 aa10.86□□□□□ -0.67
GGA3-209ENST00000580646 TSPAN1O60635 241 aa10.86□□□□□ -0.67
GGA3-209ENST00000580646 FGF18O76093 207 aa10.86□□□□□ -0.67
GGA3-209ENST00000580646 ATF7P17544 494 aaPredicted RBP10.86□□□□□ -0.67
GGA3-209ENST00000580646 LAG3P18627 525 aa10.86□□□□□ -0.67
GGA3-209ENST00000580646 HOXA11P31270 313 aaPredicted RBP10.86□□□□□ -0.67
GGA3-209ENST00000580646 IRS1P35568 1242 aa10.86□□□□□ -0.67
GGA3-209ENST00000580646 RAB27AP51159 221 aa10.86□□□□□ -0.67
GGA3-209ENST00000580646 GTF2BQ00403 316 aa10.86□□□□□ -0.67
GGA3-209ENST00000580646 UBE3AQ05086 875 aa10.86□□□□□ -0.67
GGA3-209ENST00000580646 EHHADHQ08426 723 aa10.86□□□□□ -0.67
GGA3-209ENST00000580646 RAD51AP2Q09MP3 1159 aa10.86□□□□□ -0.67
GGA3-209ENST00000580646 HYAL1Q12794 435 aa10.86□□□□□ -0.67
GGA3-209ENST00000580646 ALCAMQ13740 583 aa10.86□□□□□ -0.67
GGA3-209ENST00000580646 CLLU1OSQ5K130 101 aa10.86□□□□□ -0.67
GGA3-209ENST00000580646 NOTUMQ6P988 496 aa10.86□□□□□ -0.67
GGA3-209ENST00000580646 EP400NLQ6ZTU2 488 aa10.86□□□□□ -0.67
GGA3-209ENST00000580646 UNC13DQ70J99 1090 aa10.86□□□□□ -0.67
GGA3-209ENST00000580646 THNSL1Q8IYQ7 743 aa10.86□□□□□ -0.67
GGA3-209ENST00000580646 LRRC43Q8N309 656 aa10.86□□□□□ -0.67
GGA3-209ENST00000580646 MYCT1Q8N699 235 aa10.86□□□□□ -0.67
GGA3-209ENST00000580646 HELQQ8TDG4 1101 aa10.86□□□□□ -0.67
GGA3-209ENST00000580646 PPP2R3CQ969Q6 453 aa10.86□□□□□ -0.67
GGA3-209ENST00000580646 STRA6Q9BX79 667 aa10.86□□□□□ -0.67
GGA3-209ENST00000580646 IGFLR1Q9H665 355 aa10.86□□□□□ -0.67
GGA3-209ENST00000580646 PANK4Q9NVE7 773 aa10.86□□□□□ -0.67
GGA3-209ENST00000580646 CLDND1Q9NY35 253 aa10.86□□□□□ -0.67
GGA3-209ENST00000580646 HOOK1Q9UJC3 728 aaKnown RBP10.86□□□□□ -0.67
GGA3-209ENST00000580646 BRWD1Q9NSI6 2320 aa10.86□□□□□ -0.67
GGA3-209ENST00000580646 ZNF623O75123 536 aa10.85□□□□□ -0.67
GGA3-209ENST00000580646 GADD45BO75293 160 aaPredicted RBP10.85□□□□□ -0.67
GGA3-209ENST00000580646 PPP1R37O75864 691 aa10.85□□□□□ -0.67
GGA3-209ENST00000580646 PIGRP01833 764 aa10.85□□□□□ -0.67
GGA3-209ENST00000580646 PRKCBP05771 671 aa10.85□□□□□ -0.67
GGA3-209ENST00000580646 ARF4P18085 180 aaPredicted RBP10.85□□□□□ -0.67
GGA3-209ENST00000580646 GTF2F1P35269 517 aaKnown RBP eCLIP10.85□□□□□ -0.67
GGA3-209ENST00000580646 LTBRP36941 435 aa10.85□□□□□ -0.67
GGA3-209ENST00000580646 ASIC1P78348 528 aa10.85□□□□□ -0.67
GGA3-209ENST00000580646 CACNB1Q02641 598 aaPredicted RBP10.85□□□□□ -0.67
GGA3-209ENST00000580646 STRN3Q13033 797 aa10.85□□□□□ -0.67
GGA3-209ENST00000580646 PSMD2Q13200 908 aa10.85□□□□□ -0.67
GGA3-209ENST00000580646 PRPF4BQ13523 1007 aaKnown RBP10.85□□□□□ -0.67
GGA3-209ENST00000580646 CTC1Q2NKJ3 1217 aa10.85□□□□□ -0.67
GGA3-209ENST00000580646 PUS10Q3MIT2 529 aaKnown RBP10.85□□□□□ -0.67
GGA3-209ENST00000580646 KCNT2Q6UVM3 1135 aa10.85□□□□□ -0.67
GGA3-209ENST00000580646 TAS1R3Q7RTX0 852 aa10.85□□□□□ -0.67
GGA3-209ENST00000580646 ZNF720Q7Z2F6 126 aa10.85□□□□□ -0.67
GGA3-209ENST00000580646 HAUS6Q7Z4H7 955 aa10.85□□□□□ -0.67
GGA3-209ENST00000580646 SFR1Q86XK3 245 aa10.85□□□□□ -0.67
GGA3-209ENST00000580646 MICAL1Q8TDZ2 1067 aa10.85□□□□□ -0.67
GGA3-209ENST00000580646 STAMQ92783 540 aa10.85□□□□□ -0.67
GGA3-209ENST00000580646 ZNF558Q96NG5 402 aa10.85□□□□□ -0.67
GGA3-209ENST00000580646 POLD4Q9HCU8 107 aa10.85□□□□□ -0.67
GGA3-209ENST00000580646 FAM105AQ9NUU6 356 aa10.85□□□□□ -0.67
GGA3-209ENST00000580646 KIAA1671Q9BY89 1806 aa10.85□□□□□ -0.67
GGA3-209ENST00000580646 ZMYM2Q9UBW7 1377 aa10.85□□□□□ -0.67
GGA3-209ENST00000580646 XIRP2A4UGR9 3374 aa10.85□□□□□ -0.67
GGA3-209ENST00000580646 UBE4BO95155 1302 aa10.84□□□□□ -0.67
GGA3-209ENST00000580646 GRXCR2A6NFK2 248 aa10.84□□□□□ -0.67
GGA3-209ENST00000580646 K7ENM7 598 aa10.84□□□□□ -0.67
GGA3-209ENST00000580646 N4BP3O15049 544 aa10.84□□□□□ -0.67
GGA3-209ENST00000580646 EIF3DO15371 548 aaKnown RBP eCLIP10.84□□□□□ -0.67
GGA3-209ENST00000580646 SLC16A4O15374 487 aa10.84□□□□□ -0.67
GGA3-209ENST00000580646 KLRC4O43908 158 aa10.84□□□□□ -0.67
GGA3-209ENST00000580646 KINO60870 393 aaKnown RBP10.84□□□□□ -0.67
GGA3-209ENST00000580646 PRPF40AO75400 957 aaKnown RBP10.84□□□□□ -0.67
GGA3-209ENST00000580646 NR1I2O75469 434 aa10.84□□□□□ -0.67
GGA3-209ENST00000580646 IDEP14735 1019 aa10.84□□□□□ -0.67
GGA3-209ENST00000580646 LIG1P18858 919 aa10.84□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms