RNA–Protein interactions for RNA: ENST00000580419.5

SMARCE1-216, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 1 (best) BASIC

Gene SMARCE1, Length 1,228 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-216ENST00000580419 N4BP3O15049 544 aa16.04■□□□□ 0.16
SMARCE1-216ENST00000580419 USO1O60763 962 aaKnown RBP16.04■□□□□ 0.16
SMARCE1-216ENST00000580419 DTNBO60941 627 aa16.04■□□□□ 0.16
SMARCE1-216ENST00000580419 CLCN4P51793 760 aa16.04■□□□□ 0.16
SMARCE1-216ENST00000580419 AFF1P51825 1210 aaKnown RBP16.04■□□□□ 0.16
SMARCE1-216ENST00000580419 MAPK6Q16659 721 aa16.04■□□□□ 0.16
SMARCE1-216ENST00000580419 HFE2Q6ZVN8 426 aa16.04■□□□□ 0.16
SMARCE1-216ENST00000580419 RPGRIP1Q96KN7 1286 aa16.04■□□□□ 0.16
SMARCE1-216ENST00000580419 KLHL5Q96PQ7 755 aa16.04■□□□□ 0.16
SMARCE1-216ENST00000580419 RPS6KC1Q96S38 1066 aa16.04■□□□□ 0.16
SMARCE1-216ENST00000580419 GAD1Q99259 594 aa16.04■□□□□ 0.16
SMARCE1-216ENST00000580419 COLEC11Q9BWP8 271 aa16.04■□□□□ 0.16
SMARCE1-216ENST00000580419 CCDC113Q9H0I3 377 aa16.04■□□□□ 0.16
SMARCE1-216ENST00000580419 MARCH5Q9NX47 278 aa16.04■□□□□ 0.16
SMARCE1-216ENST00000580419 FNIP2Q9P278 1114 aa16.04■□□□□ 0.16
SMARCE1-216ENST00000580419 KCNG1Q9UIX4 513 aa16.04■□□□□ 0.16
SMARCE1-216ENST00000580419 ARHGEF35A5YM69 484 aa16.03■□□□□ 0.16
SMARCE1-216ENST00000580419 ST18O60284 1047 aa16.03■□□□□ 0.16
SMARCE1-216ENST00000580419 POMCP01189 267 aa16.03■□□□□ 0.16
SMARCE1-216ENST00000580419 URODP06132 367 aa16.03■□□□□ 0.16
SMARCE1-216ENST00000580419 ADH1AP07327 375 aa16.03■□□□□ 0.16
SMARCE1-216ENST00000580419 CNPP09543 421 aaKnown RBP16.03■□□□□ 0.16
SMARCE1-216ENST00000580419 MLH1P40692 756 aa16.03■□□□□ 0.16
SMARCE1-216ENST00000580419 MCM2P49736 904 aa16.03■□□□□ 0.16
SMARCE1-216ENST00000580419 DSG1Q02413 1049 aa16.03■□□□□ 0.16
SMARCE1-216ENST00000580419 ZNF174Q15697 407 aa16.03■□□□□ 0.16
SMARCE1-216ENST00000580419 KIAA0319Q5VV43 1072 aa16.03■□□□□ 0.16
SMARCE1-216ENST00000580419 LLGL2Q6P1M3 1020 aa16.03■□□□□ 0.16
SMARCE1-216ENST00000580419 PADI6Q6TGC4 694 aa16.03■□□□□ 0.16
SMARCE1-216ENST00000580419 GPR149Q86SP6 731 aa16.03■□□□□ 0.16
SMARCE1-216ENST00000580419 FBXL18Q96ME1 805 aa16.03■□□□□ 0.16
SMARCE1-216ENST00000580419 TIPINQ9BVW5 301 aa16.03■□□□□ 0.16
SMARCE1-216ENST00000580419 GBP3Q9H0R5 595 aa16.03■□□□□ 0.16
SMARCE1-216ENST00000580419 BMP2KQ9NSY1 1161 aaPredicted RBP16.03■□□□□ 0.16
SMARCE1-216ENST00000580419 TMEM221A6NGB7 291 aa16.02■□□□□ 0.16
SMARCE1-216ENST00000580419 LRRIQ4A6NIV6 560 aa16.02■□□□□ 0.16
SMARCE1-216ENST00000580419 M0R296 226 aa16.02■□□□□ 0.16
SMARCE1-216ENST00000580419 SLC26A4O43511 780 aa16.02■□□□□ 0.16
SMARCE1-216ENST00000580419 GUCY1B3Q02153 619 aa16.02■□□□□ 0.16
SMARCE1-216ENST00000580419 GNL2Q13823 731 aaKnown RBP16.02■□□□□ 0.16
SMARCE1-216ENST00000580419 LONRF3Q496Y0 759 aa16.02■□□□□ 0.16
SMARCE1-216ENST00000580419 RILPL1Q5EBL4 403 aa16.02■□□□□ 0.16
SMARCE1-216ENST00000580419 POTEGQ6S5H5 508 aa16.02■□□□□ 0.16
SMARCE1-216ENST00000580419 APBB1IPQ7Z5R6 666 aaPredicted RBP16.02■□□□□ 0.16
SMARCE1-216ENST00000580419 CABP7Q86V35 215 aa16.02■□□□□ 0.16
SMARCE1-216ENST00000580419 KCNN1Q92952 543 aa16.02■□□□□ 0.16
SMARCE1-216ENST00000580419 ASIC4Q96FT7 647 aa16.02■□□□□ 0.16
SMARCE1-216ENST00000580419 CPB2Q96IY4 423 aa16.02■□□□□ 0.16
SMARCE1-216ENST00000580419 NXF3Q9H4D5 531 aaKnown RBP16.02■□□□□ 0.16
SMARCE1-216ENST00000580419 PLEKHA4Q9H4M7 779 aa16.02■□□□□ 0.16
SMARCE1-216ENST00000580419 POMKQ9H5K3 350 aa16.02■□□□□ 0.16
SMARCE1-216ENST00000580419 LRWD1Q9UFC0 647 aa16.02■□□□□ 0.16
SMARCE1-216ENST00000580419 SORCS3Q9UPU3 1222 aa16.02■□□□□ 0.16
SMARCE1-216ENST00000580419 TRIP11Q15643 1979 aa16.02■□□□□ 0.15
SMARCE1-216ENST00000580419 C2orf16Q68DN1 1984 aa16.02■□□□□ 0.15
SMARCE1-216ENST00000580419 DOCK8Q8NF50 2099 aa16.01■□□□□ 0.15
SMARCE1-216ENST00000580419 B4GALT5O43286 388 aa16.01■□□□□ 0.15
SMARCE1-216ENST00000580419 EPCAMP16422 314 aa16.01■□□□□ 0.15
SMARCE1-216ENST00000580419 KLRC2P26717 231 aa16.01■□□□□ 0.15
SMARCE1-216ENST00000580419 GLUD2P49448 558 aa16.01■□□□□ 0.15
SMARCE1-216ENST00000580419 TOB1P50616 345 aaPredicted RBP16.01■□□□□ 0.15
SMARCE1-216ENST00000580419 SCNN1GP51170 649 aa16.01■□□□□ 0.15
SMARCE1-216ENST00000580419 PTGDRQ13258 359 aa16.01■□□□□ 0.15
SMARCE1-216ENST00000580419 PRPF4BQ13523 1007 aaKnown RBP16.01■□□□□ 0.15
SMARCE1-216ENST00000580419 USP41Q3LFD5 358 aa16.01■□□□□ 0.15
SMARCE1-216ENST00000580419 DCAF4L1Q3SXM0 396 aa16.01■□□□□ 0.15
SMARCE1-216ENST00000580419 RTL10Q7L3V2 364 aa16.01■□□□□ 0.15
SMARCE1-216ENST00000580419 FBXL6Q8N531 539 aa16.01■□□□□ 0.15
SMARCE1-216ENST00000580419 IFT74Q96LB3 600 aa16.01■□□□□ 0.15
SMARCE1-216ENST00000580419 ZFP42Q96MM3 310 aa16.01■□□□□ 0.15
SMARCE1-216ENST00000580419 ADPGKQ9BRR6 497 aa16.01■□□□□ 0.15
SMARCE1-216ENST00000580419 GPRC5CQ9NQ84 441 aa16.01■□□□□ 0.15
SMARCE1-216ENST00000580419 MIOSQ9NXC5 875 aa16.01■□□□□ 0.15
SMARCE1-216ENST00000580419 ADAM28Q9UKQ2 775 aa16.01■□□□□ 0.15
SMARCE1-216ENST00000580419 RBM19Q9Y4C8 960 aaKnown RBP16.01■□□□□ 0.15
SMARCE1-216ENST00000580419 HES2Q9Y543 173 aa16.01■□□□□ 0.15
SMARCE1-216ENST00000580419 SCP2P22307 547 aa16■□□□□ 0.15
SMARCE1-216ENST00000580419 OR1G1P47890 313 aa16■□□□□ 0.15
SMARCE1-216ENST00000580419 ELAVL2Q12926 359 aaKnown RBP16■□□□□ 0.15
SMARCE1-216ENST00000580419 TUSC3Q13454 348 aa16■□□□□ 0.15
SMARCE1-216ENST00000580419 MTMR3Q13615 1198 aa16■□□□□ 0.15
SMARCE1-216ENST00000580419 HYIQ5T013 277 aa16■□□□□ 0.15
SMARCE1-216ENST00000580419 ARL6IP4Q66PJ3 421 aaKnown RBP16■□□□□ 0.15
SMARCE1-216ENST00000580419 PDXDC1Q6P996 788 aa16■□□□□ 0.15
SMARCE1-216ENST00000580419 OTOP3Q7RTS5 596 aa16■□□□□ 0.15
SMARCE1-216ENST00000580419 AUTS2Q8WXX7 1259 aa16■□□□□ 0.15
SMARCE1-216ENST00000580419 NTPCRQ9BSD7 190 aaKnown RBP16■□□□□ 0.15
SMARCE1-216ENST00000580419 IRF2BPLQ9H1B7 796 aa16■□□□□ 0.15
SMARCE1-216ENST00000580419 PDZD7Q9H5P4 517 aa16■□□□□ 0.15
SMARCE1-216ENST00000580419 TMEM134Q9H6X4 195 aa16■□□□□ 0.15
SMARCE1-216ENST00000580419 EIF4ENIF1Q9NRA8 985 aaKnown RBP16■□□□□ 0.15
SMARCE1-216ENST00000580419 KCND2Q9NZV8 630 aa16■□□□□ 0.15
SMARCE1-216ENST00000580419 DNM3Q9UQ16 869 aa16■□□□□ 0.15
SMARCE1-216ENST00000580419 MYH11P35749 1972 aa16■□□□□ 0.15
SMARCE1-216ENST00000580419 KMT2EQ8IZD2 1858 aa15.99■□□□□ 0.15
SMARCE1-216ENST00000580419 SF3B1O75533 1304 aaKnown RBP eCLIP15.99■□□□□ 0.15
SMARCE1-216ENST00000580419 CITO14578 2027 aa15.99■□□□□ 0.15
SMARCE1-216ENST00000580419 TMEM189-UBE2V1I3L0A0 370 aa15.99■□□□□ 0.15
SMARCE1-216ENST00000580419 TEX28O15482 410 aa15.99■□□□□ 0.15
SMARCE1-216ENST00000580419 NPTXRO95502 500 aa15.99■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms