RNA–Protein interactions for RNA: ENST00000580391.5

CDK5RAP3-218, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 5

Gene CDK5RAP3, Length 1,957 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-218ENST00000580391 ARHGEF19Q8IW93 802 aa16.09■□□□□ 0.17
CDK5RAP3-218ENST00000580391 PPP1R13LQ8WUF5 828 aa16.09■□□□□ 0.17
CDK5RAP3-218ENST00000580391 GPR88Q9GZN0 384 aa16.09■□□□□ 0.17
CDK5RAP3-218ENST00000580391 MINDY3Q9H8M7 445 aa16.09■□□□□ 0.17
CDK5RAP3-218ENST00000580391 UQCRHLA0A096LP55 91 aa16.09■□□□□ 0.17
CDK5RAP3-218ENST00000580391 F8VZ95 297 aa16.09■□□□□ 0.17
CDK5RAP3-218ENST00000580391 MAGEB2O15479 319 aa16.09■□□□□ 0.17
CDK5RAP3-218ENST00000580391 TOMM70O94826 608 aa16.09■□□□□ 0.17
CDK5RAP3-218ENST00000580391 LCA5LO95447 670 aa16.09■□□□□ 0.17
CDK5RAP3-218ENST00000580391 UQCRHP07919 91 aa16.09■□□□□ 0.17
CDK5RAP3-218ENST00000580391 CETN1Q12798 172 aa16.09■□□□□ 0.17
CDK5RAP3-218ENST00000580391 SEZ6Q53EL9 994 aa16.09■□□□□ 0.17
CDK5RAP3-218ENST00000580391 LMBRD2Q68DH5 695 aaPredicted RBP16.09■□□□□ 0.17
CDK5RAP3-218ENST00000580391 SLFN12LQ6IEE8 588 aa16.09■□□□□ 0.17
CDK5RAP3-218ENST00000580391 MTHFD1LQ6UB35 978 aa16.09■□□□□ 0.17
CDK5RAP3-218ENST00000580391 SEMA4DQ92854 862 aa16.09■□□□□ 0.17
CDK5RAP3-218ENST00000580391 JAKMIP2Q96AA8 810 aa16.09■□□□□ 0.17
CDK5RAP3-218ENST00000580391 LACRTQ9GZZ8 138 aa16.09■□□□□ 0.17
CDK5RAP3-218ENST00000580391 HAUS4Q9H6D7 363 aa16.09■□□□□ 0.17
CDK5RAP3-218ENST00000580391 TMEM8AQ9HCN3 771 aa16.09■□□□□ 0.17
CDK5RAP3-218ENST00000580391 UTP3Q9NQZ2 479 aaKnown RBP eCLIP16.09■□□□□ 0.172e-6■■■■□ 19.4
CDK5RAP3-218ENST00000580391 AKT3Q9Y243 479 aa16.09■□□□□ 0.17
CDK5RAP3-218ENST00000580391 PTPRJQ12913 1337 aa16.08■□□□□ 0.17
CDK5RAP3-218ENST00000580391 INO80B-WBP1J3KQ70 363 aa16.08■□□□□ 0.16
CDK5RAP3-218ENST00000580391 KIAA0391O15091 583 aaKnown RBP16.08■□□□□ 0.16
CDK5RAP3-218ENST00000580391 PMM2O15305 246 aa16.08■□□□□ 0.16
CDK5RAP3-218ENST00000580391 B4GALT5O43286 388 aa16.08■□□□□ 0.16
CDK5RAP3-218ENST00000580391 F2P00734 622 aa16.08■□□□□ 0.16
CDK5RAP3-218ENST00000580391 VTNP04004 478 aa16.08■□□□□ 0.16
CDK5RAP3-218ENST00000580391 PSMC4P43686 418 aa16.08■□□□□ 0.16
CDK5RAP3-218ENST00000580391 VAV2P52735 878 aa16.08■□□□□ 0.16
CDK5RAP3-218ENST00000580391 CHMP4BP1P59074 171 aa16.08■□□□□ 0.16
CDK5RAP3-218ENST00000580391 PTENP60484 403 aa16.08■□□□□ 0.16
CDK5RAP3-218ENST00000580391 MBTD1Q05BQ5 628 aa16.08■□□□□ 0.16
CDK5RAP3-218ENST00000580391 DRAP1Q14919 205 aaPredicted RBP16.08■□□□□ 0.16
CDK5RAP3-218ENST00000580391 SPA17Q15506 151 aa16.08■□□□□ 0.16
CDK5RAP3-218ENST00000580391 MARCH8Q5T0T0 291 aa16.08■□□□□ 0.16
CDK5RAP3-218ENST00000580391 KRT39Q6A163 491 aa16.08■□□□□ 0.16
CDK5RAP3-218ENST00000580391 ZBTB33Q86T24 672 aa16.08■□□□□ 0.16
CDK5RAP3-218ENST00000580391 MYRIPQ8NFW9 859 aa16.08■□□□□ 0.16
CDK5RAP3-218ENST00000580391 ACO2Q99798 780 aaKnown RBP16.08■□□□□ 0.16
CDK5RAP3-218ENST00000580391 INO80BQ9C086 356 aaPredicted RBP16.08■□□□□ 0.16
CDK5RAP3-218ENST00000580391 KIAA1586Q9HCI6 787 aa16.08■□□□□ 0.16
CDK5RAP3-218ENST00000580391 RBAKQ9NYW8 714 aaPredicted RBP16.08■□□□□ 0.16
CDK5RAP3-218ENST00000580391 GUCA1BQ9UMX6 200 aa16.08■□□□□ 0.16
CDK5RAP3-218ENST00000580391 GABRQQ9UN88 632 aa16.08■□□□□ 0.16
CDK5RAP3-218ENST00000580391 ABLIM1O14639 778 aa16.07■□□□□ 0.16
CDK5RAP3-218ENST00000580391 CLDN3O15551 220 aa16.07■□□□□ 0.16
CDK5RAP3-218ENST00000580391 KIF5CO60282 957 aa16.07■□□□□ 0.16
CDK5RAP3-218ENST00000580391 TOM1L1O75674 476 aa16.07■□□□□ 0.16
CDK5RAP3-218ENST00000580391 GFPT2O94808 682 aa16.07■□□□□ 0.16
CDK5RAP3-218ENST00000580391 TBC1D8O95759 1140 aa16.07■□□□□ 0.16
CDK5RAP3-218ENST00000580391 TERF1P54274 439 aa16.07■□□□□ 0.16
CDK5RAP3-218ENST00000580391 FCGRTP55899 365 aa16.07■□□□□ 0.16
CDK5RAP3-218ENST00000580391 LACTBP83111 547 aaPredicted RBP16.07■□□□□ 0.16
CDK5RAP3-218ENST00000580391 CAP1Q01518 475 aa16.07■□□□□ 0.16
CDK5RAP3-218ENST00000580391 NOGQ13253 232 aa16.07■□□□□ 0.16
CDK5RAP3-218ENST00000580391 PSMD6Q15008 389 aa16.07■□□□□ 0.16
CDK5RAP3-218ENST00000580391 ARHGAP44Q17R89 818 aa16.07■□□□□ 0.16
CDK5RAP3-218ENST00000580391 CCDC122Q5T0U0 273 aa16.07■□□□□ 0.16
CDK5RAP3-218ENST00000580391 USP37Q86T82 979 aa16.07■□□□□ 0.16
CDK5RAP3-218ENST00000580391 TAS1R2Q8TE23 839 aa16.07■□□□□ 0.16
CDK5RAP3-218ENST00000580391 KAT2BQ92831 832 aa16.07■□□□□ 0.16
CDK5RAP3-218ENST00000580391 STK33Q9BYT3 514 aa16.07■□□□□ 0.16
CDK5RAP3-218ENST00000580391 IFIH1Q9BYX4 1025 aaKnown RBP16.07■□□□□ 0.16
CDK5RAP3-218ENST00000580391 FZD8Q9H461 694 aa16.07■□□□□ 0.16
CDK5RAP3-218ENST00000580391 IFT122Q9HBG6 1241 aa16.07■□□□□ 0.16
CDK5RAP3-218ENST00000580391 PDE11AQ9HCR9 933 aa16.07■□□□□ 0.16
CDK5RAP3-218ENST00000580391 A0A087WZ62 844 aa16.07■□□□□ 0.16
CDK5RAP3-218ENST00000580391 ASAP2O43150 1006 aa16.07■□□□□ 0.16
CDK5RAP3-218ENST00000580391 FAM189A1O60320 539 aa16.07■□□□□ 0.16
CDK5RAP3-218ENST00000580391 TNFSF9P41273 254 aa16.07■□□□□ 0.16
CDK5RAP3-218ENST00000580391 PRKCIP41743 596 aa16.07■□□□□ 0.16
CDK5RAP3-218ENST00000580391 STAT1P42224 750 aa16.07■□□□□ 0.16
CDK5RAP3-218ENST00000580391 BEX3Q00994 111 aa16.07■□□□□ 0.16
CDK5RAP3-218ENST00000580391 PTK2Q05397 1052 aa16.07■□□□□ 0.16
CDK5RAP3-218ENST00000580391 ENPEPQ07075 957 aa16.07■□□□□ 0.16
CDK5RAP3-218ENST00000580391 ZNF569Q5MCW4 686 aa16.07■□□□□ 0.16
CDK5RAP3-218ENST00000580391 SV2AQ7L0J3 742 aa16.07■□□□□ 0.16
CDK5RAP3-218ENST00000580391 ZNF571Q7Z3V5 609 aaPredicted RBP16.07■□□□□ 0.16
CDK5RAP3-218ENST00000580391 SLC35F6Q8N357 371 aa16.07■□□□□ 0.16
CDK5RAP3-218ENST00000580391 TRPV1Q8NER1 839 aa16.07■□□□□ 0.16
CDK5RAP3-218ENST00000580391 LMBR1Q8WVP7 490 aa16.07■□□□□ 0.16
CDK5RAP3-218ENST00000580391 TRIB2Q92519 343 aa16.07■□□□□ 0.16
CDK5RAP3-218ENST00000580391 ZNF516Q92618 1163 aa16.07■□□□□ 0.16
CDK5RAP3-218ENST00000580391 KAT5Q92993 513 aa16.07■□□□□ 0.16
CDK5RAP3-218ENST00000580391 ELMO3Q96BJ8 720 aa16.07■□□□□ 0.16
CDK5RAP3-218ENST00000580391 CAPNS2Q96L46 248 aa16.07■□□□□ 0.16
CDK5RAP3-218ENST00000580391 FDXACB1Q9BRP7 624 aaPredicted RBP16.07■□□□□ 0.16
CDK5RAP3-218ENST00000580391 SETD4Q9NVD3 440 aa16.07■□□□□ 0.16
CDK5RAP3-218ENST00000580391 COQ4Q9Y3A0 265 aa16.07■□□□□ 0.16
CDK5RAP3-218ENST00000580391 PCDHA13Q9Y5I0 950 aa16.07■□□□□ 0.16
CDK5RAP3-218ENST00000580391 A0A087X0T9 212 aa16.06■□□□□ 0.16
CDK5RAP3-218ENST00000580391 RBAK-RBAKDNI3L0D1 243 aa16.06■□□□□ 0.16
CDK5RAP3-218ENST00000580391 ACKR2O00590 384 aa16.06■□□□□ 0.16
CDK5RAP3-218ENST00000580391 EVI5O60447 810 aa16.06■□□□□ 0.16
CDK5RAP3-218ENST00000580391 CSDE1O75534 798 aaKnown RBP16.06■□□□□ 0.16
CDK5RAP3-218ENST00000580391 LDHAP00338 332 aaKnown RBP16.06■□□□□ 0.16
CDK5RAP3-218ENST00000580391 ALDH1A1P00352 501 aa16.06■□□□□ 0.16
CDK5RAP3-218ENST00000580391 IQCF3P0C7M6 154 aa16.06■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms