RNA–Protein interactions for RNA: ENST00000580315.1

CDC42EP4-205, Transcript of CDC42 effector protein 4, humanhuman

TSL 2

Gene CDC42EP4, Length 1,022 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42EP4-205ENST00000580315 SIGLEC14Q08ET2 396 aa27.4■■□□□ 1.98
CDC42EP4-205ENST00000580315 AGMOQ6ZNB7 445 aa27.4■■□□□ 1.98
CDC42EP4-205ENST00000580315 C1orf186Q6ZWK4 172 aa27.4■■□□□ 1.98
CDC42EP4-205ENST00000580315 SUGP1Q8IWZ8 645 aaKnown RBP27.4■■□□□ 1.98
CDC42EP4-205ENST00000580315 EIF2AQ9BY44 585 aaKnown RBP27.4■■□□□ 1.98
CDC42EP4-205ENST00000580315 KCND2Q9NZV8 630 aa27.4■■□□□ 1.98
CDC42EP4-205ENST00000580315 A0A1B0GUA9 196 aa27.39■■□□□ 1.98
CDC42EP4-205ENST00000580315 MEIS3P2A8K0S8 358 aa27.39■■□□□ 1.98
CDC42EP4-205ENST00000580315 PRKCBP05771 671 aa27.39■■□□□ 1.98
CDC42EP4-205ENST00000580315 LIG1P18858 919 aa27.39■■□□□ 1.98
CDC42EP4-205ENST00000580315 GUCY2CP25092 1073 aa27.39■■□□□ 1.98
CDC42EP4-205ENST00000580315 MARCKSP29966 332 aaPredicted RBP27.39■■□□□ 1.98
CDC42EP4-205ENST00000580315 ALDH7A1P49419 539 aaKnown RBP27.39■■□□□ 1.98
CDC42EP4-205ENST00000580315 DMP1Q13316 513 aaPredicted RBP27.39■■□□□ 1.98
CDC42EP4-205ENST00000580315 PRPF4BQ13523 1007 aaKnown RBP27.39■■□□□ 1.98
CDC42EP4-205ENST00000580315 LLGL2Q6P1M3 1020 aa27.39■■□□□ 1.98
CDC42EP4-205ENST00000580315 FBXL6Q8N531 539 aa27.39■■□□□ 1.98
CDC42EP4-205ENST00000580315 SMG8Q8ND04 991 aaKnown RBP27.39■■□□□ 1.98
CDC42EP4-205ENST00000580315 APOL5Q9BWW9 433 aa27.39■■□□□ 1.98
CDC42EP4-205ENST00000580315 C17orf75Q9HAS0 396 aa27.39■■□□□ 1.98
CDC42EP4-205ENST00000580315 TBC1D13Q9NVG8 400 aa27.39■■□□□ 1.98
CDC42EP4-205ENST00000580315 SPG21Q9NZD8 308 aa27.39■■□□□ 1.98
CDC42EP4-205ENST00000580315 KANSL3Q9P2N6 904 aa27.39■■□□□ 1.98
CDC42EP4-205ENST00000580315 KCNG1Q9UIX4 513 aa27.39■■□□□ 1.98
CDC42EP4-205ENST00000580315 CCDC169A6NNP5 214 aa27.38■■□□□ 1.97
CDC42EP4-205ENST00000580315 ACKR2O00590 384 aa27.38■■□□□ 1.97
CDC42EP4-205ENST00000580315 PEX3P56589 373 aa27.38■■□□□ 1.97
CDC42EP4-205ENST00000580315 GRIN1Q05586 938 aa27.38■■□□□ 1.97
CDC42EP4-205ENST00000580315 TMC7Q7Z402 723 aa27.38■■□□□ 1.97
CDC42EP4-205ENST00000580315 PHOX2BQ99453 314 aa27.38■■□□□ 1.97
CDC42EP4-205ENST00000580315 CCDC113Q9H0I3 377 aa27.38■■□□□ 1.97
CDC42EP4-205ENST00000580315 SRPRBQ9Y5M8 271 aaKnown RBP27.38■■□□□ 1.97
CDC42EP4-205ENST00000580315 PHLPP2Q6ZVD8 1323 aa27.38■■□□□ 1.97
CDC42EP4-205ENST00000580315 N4BP3O15049 544 aa27.37■■□□□ 1.97
CDC42EP4-205ENST00000580315 NPTXRO95502 500 aa27.37■■□□□ 1.97
CDC42EP4-205ENST00000580315 HOXB8P17481 243 aaPredicted RBP27.37■■□□□ 1.97
CDC42EP4-205ENST00000580315 PTPN5P54829 565 aa27.37■■□□□ 1.97
CDC42EP4-205ENST00000580315 SLC12A3P55017 1021 aa27.37■■□□□ 1.97
CDC42EP4-205ENST00000580315 ASIC4Q96FT7 647 aa27.37■■□□□ 1.97
CDC42EP4-205ENST00000580315 ZNF396Q96N95 335 aaPredicted RBP27.37■■□□□ 1.97
CDC42EP4-205ENST00000580315 USP28Q96RU2 1077 aa27.37■■□□□ 1.97
CDC42EP4-205ENST00000580315 PRRX2Q99811 253 aa27.37■■□□□ 1.97
CDC42EP4-205ENST00000580315 KIFC3Q9BVG8 833 aa27.37■■□□□ 1.97
CDC42EP4-205ENST00000580315 DAXXQ9UER7 740 aaPredicted RBP27.37■■□□□ 1.97
CDC42EP4-205ENST00000580315 FBXO2Q9UK22 296 aaPredicted RBP27.37■■□□□ 1.97
CDC42EP4-205ENST00000580315 MORC2Q9Y6X9 1032 aaPredicted RBP27.37■■□□□ 1.97
CDC42EP4-205ENST00000580315 K7ERI5 159 aa27.36■■□□□ 1.97
CDC42EP4-205ENST00000580315 ZC3H11AO75152 810 aaKnown RBP eCLIP27.36■■□□□ 1.97
CDC42EP4-205ENST00000580315 TXLNAP40222 546 aa27.36■■□□□ 1.97
CDC42EP4-205ENST00000580315 NPTX2P47972 431 aa27.36■■□□□ 1.97
CDC42EP4-205ENST00000580315 BCAR1P56945 870 aa27.36■■□□□ 1.97
CDC42EP4-205ENST00000580315 SLC39A14Q15043 492 aa27.36■■□□□ 1.97
CDC42EP4-205ENST00000580315 KARSQ15046 597 aaKnown RBP27.36■■□□□ 1.97
CDC42EP4-205ENST00000580315 PTPN21Q16825 1174 aa27.36■■□□□ 1.97
CDC42EP4-205ENST00000580315 CDR2LQ86X02 465 aaPredicted RBP27.36■■□□□ 1.97
CDC42EP4-205ENST00000580315 DAW1Q8N136 415 aa27.36■■□□□ 1.97
CDC42EP4-205ENST00000580315 MRPL43Q8N983 215 aaKnown RBP27.36■■□□□ 1.97
CDC42EP4-205ENST00000580315 ADPGKQ9BRR6 497 aa27.36■■□□□ 1.97
CDC42EP4-205ENST00000580315 CCSER1Q9C0I3 900 aa27.36■■□□□ 1.97
CDC42EP4-205ENST00000580315 KMT5AQ9NQR1 393 aa27.36■■□□□ 1.97
CDC42EP4-205ENST00000580315 RBM19Q9Y4C8 960 aaKnown RBP27.36■■□□□ 1.97
CDC42EP4-205ENST00000580315 PLCG1P19174 1290 aa27.35■■□□□ 1.97
CDC42EP4-205ENST00000580315 RAD51AP2Q09MP3 1159 aa27.35■■□□□ 1.97
CDC42EP4-205ENST00000580315 MAPK7Q13164 816 aa27.35■■□□□ 1.97
CDC42EP4-205ENST00000580315 SLC39A11Q8N1S5 342 aa27.35■■□□□ 1.97
CDC42EP4-205ENST00000580315 SPRYD3Q8NCJ5 442 aa27.35■■□□□ 1.97
CDC42EP4-205ENST00000580315 FAM193BQ96PV7 902 aaPredicted RBP27.35■■□□□ 1.97
CDC42EP4-205ENST00000580315 APOL6Q9BWW8 343 aa27.35■■□□□ 1.97
CDC42EP4-205ENST00000580315 GBP3Q9H0R5 595 aa27.35■■□□□ 1.97
CDC42EP4-205ENST00000580315 CCDC39Q9UFE4 941 aa27.35■■□□□ 1.97
CDC42EP4-205ENST00000580315 GIT1Q9Y2X7 761 aa27.35■■□□□ 1.97
CDC42EP4-205ENST00000580315 HES2Q9Y543 173 aa27.35■■□□□ 1.97
CDC42EP4-205ENST00000580315 ZSCAN22P10073 491 aaPredicted RBP27.34■■□□□ 1.97
CDC42EP4-205ENST00000580315 SMTNP53814 917 aa27.34■■□□□ 1.97
CDC42EP4-205ENST00000580315 TCF15Q12870 199 aa27.34■■□□□ 1.97
CDC42EP4-205ENST00000580315 STK38Q15208 465 aa27.34■■□□□ 1.97
CDC42EP4-205ENST00000580315 APBB1IPQ7Z5R6 666 aaPredicted RBP27.34■■□□□ 1.97
CDC42EP4-205ENST00000580315 CASP10Q92851 521 aa27.34■■□□□ 1.97
CDC42EP4-205ENST00000580315 TMEM169Q96HH4 297 aa27.34■■□□□ 1.97
CDC42EP4-205ENST00000580315 RNF39Q9H2S5 420 aa27.34■■□□□ 1.97
CDC42EP4-205ENST00000580315 NXF3Q9H4D5 531 aaKnown RBP27.34■■□□□ 1.97
CDC42EP4-205ENST00000580315 PDZD7Q9H5P4 517 aa27.34■■□□□ 1.97
CDC42EP4-205ENST00000580315 NRDE2Q9H7Z3 1164 aa27.34■■□□□ 1.97
CDC42EP4-205ENST00000580315 HCFC2Q9Y5Z7 792 aa27.34■■□□□ 1.97
CDC42EP4-205ENST00000580315 C2orf71A6NGG8 1288 aa27.33■■□□□ 1.97
CDC42EP4-205ENST00000580315 PLS3P13797 630 aa27.33■■□□□ 1.97
CDC42EP4-205ENST00000580315 SP100P23497 879 aaPredicted RBP27.33■■□□□ 1.97
CDC42EP4-205ENST00000580315 NASPP49321 788 aaPredicted RBP27.33■■□□□ 1.97
CDC42EP4-205ENST00000580315 SMC1AQ14683 1233 aaKnown RBP27.33■■□□□ 1.97
CDC42EP4-205ENST00000580315 FOXD4L5Q5VV16 416 aaPredicted RBP27.33■■□□□ 1.97
CDC42EP4-205ENST00000580315 GPBP1Q86WP2 473 aa27.33■■□□□ 1.97
CDC42EP4-205ENST00000580315 KRI1Q8N9T8 703 aaKnown RBP27.33■■□□□ 1.97
CDC42EP4-205ENST00000580315 FOXD4L4Q8WXT5 416 aaPredicted RBP27.33■■□□□ 1.97
CDC42EP4-205ENST00000580315 RAD54LQ92698 747 aa27.33■■□□□ 1.97
CDC42EP4-205ENST00000580315 EPSTI1Q96J88 318 aa27.33■■□□□ 1.97
CDC42EP4-205ENST00000580315 TMEM134Q9H6X4 195 aa27.33■■□□□ 1.97
CDC42EP4-205ENST00000580315 CDH22Q9UJ99 828 aa27.33■■□□□ 1.97
CDC42EP4-205ENST00000580315 ARL5CA6NH57 179 aa27.32■■□□□ 1.96
CDC42EP4-205ENST00000580315 SFI1A8K8P3 1242 aa27.32■■□□□ 1.96
CDC42EP4-205ENST00000580315 INPPL1O15357 1258 aa27.32■■□□□ 1.96
Retrieved 100 of 20,778 RNA–protein pairs in 75.7 ms