RNA–Protein interactions for RNA: ENST00000579947.5

CCDC178-209, Transcript of coiled-coil domain containing 178, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CCDC178, Length 2,925 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC178-209ENST00000579947 CAMK1GQ96NX5 476 aa6.97□□□□□ -1.29
CCDC178-209ENST00000579947 DDX24Q9GZR7 859 aaKnown RBP eCLIP6.97□□□□□ -1.29
CCDC178-209ENST00000579947 ZFP14Q9HCL3 533 aa6.97□□□□□ -1.29
CCDC178-209ENST00000579947 STK24Q9Y6E0 443 aa6.97□□□□□ -1.29
CCDC178-209ENST00000579947 ASXL3Q9C0F0 2248 aa6.97□□□□□ -1.29
CCDC178-209ENST00000579947 GSTTP1A0A1W2PQM5 241 aa6.97□□□□□ -1.29
CCDC178-209ENST00000579947 TNFRSF10BO14763 440 aa6.97□□□□□ -1.29
CCDC178-209ENST00000579947 ZNF263O14978 683 aa6.97□□□□□ -1.29
CCDC178-209ENST00000579947 SH3BP5O60239 455 aa6.97□□□□□ -1.29
CCDC178-209ENST00000579947 HOXD12P35452 270 aa6.97□□□□□ -1.29
CCDC178-209ENST00000579947 ZNF543Q08ER8 600 aa6.97□□□□□ -1.29
CCDC178-209ENST00000579947 PABPC1LQ4VXU2 614 aaKnown RBP6.97□□□□□ -1.29
CCDC178-209ENST00000579947 PKN3Q6P5Z2 889 aa6.97□□□□□ -1.29
CCDC178-209ENST00000579947 ATG14Q6ZNE5 492 aa6.97□□□□□ -1.29
CCDC178-209ENST00000579947 TAS1R1Q7RTX1 841 aa6.97□□□□□ -1.29
CCDC178-209ENST00000579947 CSGALNACT1Q8TDX6 532 aa6.97□□□□□ -1.29
CCDC178-209ENST00000579947 ING5Q8WYH8 240 aa6.97□□□□□ -1.29
CCDC178-209ENST00000579947 SSH1Q8WYL5 1049 aa6.97□□□□□ -1.29
CCDC178-209ENST00000579947 STRBPQ96SI9 672 aaKnown RBP6.97□□□□□ -1.29
CCDC178-209ENST00000579947 SEPT3Q9UH03 358 aa6.97□□□□□ -1.29
CCDC178-209ENST00000579947 MTMR7Q9Y216 660 aa6.97□□□□□ -1.29
CCDC178-209ENST00000579947 SPECC1L-ADORA2AF8WAN1 911 aa6.96□□□□□ -1.3
CCDC178-209ENST00000579947 GBP1P32455 592 aa6.96□□□□□ -1.3
CCDC178-209ENST00000579947 PLCB4Q15147 1175 aa6.96□□□□□ -1.3
CCDC178-209ENST00000579947 SYT12Q8IV01 421 aa6.96□□□□□ -1.3
CCDC178-209ENST00000579947 KIAA0319LQ8IZA0 1049 aa6.96□□□□□ -1.3
CCDC178-209ENST00000579947 SEPT1Q8WYJ6 367 aa6.96□□□□□ -1.3
CCDC178-209ENST00000579947 SLC6A14Q9UN76 642 aa6.96□□□□□ -1.3
CCDC178-209ENST00000579947 THADAQ6YHU6 1953 aa6.96□□□□□ -1.3
CCDC178-209ENST00000579947 DOCK6Q96HP0 2047 aa6.96□□□□□ -1.3
CCDC178-209ENST00000579947 CBFA2T3O75081 653 aa6.96□□□□□ -1.3
CCDC178-209ENST00000579947 APBB3O95704 486 aa6.96□□□□□ -1.3
CCDC178-209ENST00000579947 PDHBP11177 359 aa6.96□□□□□ -1.3
CCDC178-209ENST00000579947 ATXN3P54252 364 aaPredicted RBP6.96□□□□□ -1.3
CCDC178-209ENST00000579947 CDC37Q16543 378 aaPredicted RBP6.96□□□□□ -1.3
CCDC178-209ENST00000579947 AXDND1Q5T1B0 1012 aaPredicted RBP6.96□□□□□ -1.3
CCDC178-209ENST00000579947 DAGLBQ8NCG7 672 aa6.96□□□□□ -1.3
CCDC178-209ENST00000579947 ZNF768Q9H5H4 540 aaKnown RBP6.96□□□□□ -1.3
CCDC178-209ENST00000579947 EPB41L4AQ9HCS5 686 aaPredicted RBP6.96□□□□□ -1.3
CCDC178-209ENST00000579947 CHST7Q9NS84 486 aa6.96□□□□□ -1.3
CCDC178-209ENST00000579947 MARCH5Q9NX47 278 aa6.96□□□□□ -1.3
CCDC178-209ENST00000579947 DNMT3BQ9UBC3 853 aaKnown RBP6.96□□□□□ -1.3
CCDC178-209ENST00000579947 GINS2Q9Y248 185 aa6.96□□□□□ -1.3
CCDC178-209ENST00000579947 FAN1Q9Y2M0 1017 aa6.96□□□□□ -1.3
CCDC178-209ENST00000579947 NOP58Q9Y2X3 529 aaKnown RBP6.96□□□□□ -1.3
CCDC178-209ENST00000579947 MRPS23Q9Y3D9 190 aaKnown RBP6.96□□□□□ -1.3
CCDC178-209ENST00000579947 CCL16O15467 120 aa6.95□□□□□ -1.3
CCDC178-209ENST00000579947 GPR32O75388 356 aa6.95□□□□□ -1.3
CCDC178-209ENST00000579947 MICAL2O94851 1124 aa6.95□□□□□ -1.3
CCDC178-209ENST00000579947 SNHG28P0DPA3 235 aa6.95□□□□□ -1.3
CCDC178-209ENST00000579947 TOP1P11387 765 aaKnown RBP6.95□□□□□ -1.3
CCDC178-209ENST00000579947 DHPSP49366 369 aaPredicted RBP6.95□□□□□ -1.3
CCDC178-209ENST00000579947 PREPLQ4J6C6 727 aaPredicted RBP6.95□□□□□ -1.3
CCDC178-209ENST00000579947 FAM78AQ5JUQ0 283 aa6.95□□□□□ -1.3
CCDC178-209ENST00000579947 GLB1LQ6UWU2 654 aa6.95□□□□□ -1.3
CCDC178-209ENST00000579947 RTL10Q7L3V2 364 aa6.95□□□□□ -1.3
CCDC178-209ENST00000579947 MINDY1Q8N5J2 469 aa6.95□□□□□ -1.3
CCDC178-209ENST00000579947 CEP76Q8TAP6 659 aa6.95□□□□□ -1.3
CCDC178-209ENST00000579947 TRAPPC12Q8WVT3 735 aa6.95□□□□□ -1.3
CCDC178-209ENST00000579947 OSMRQ99650 979 aa6.95□□□□□ -1.3
CCDC178-209ENST00000579947 TRAIPQ9BWF2 469 aa6.95□□□□□ -1.3
CCDC178-209ENST00000579947 PUS7LQ9H0K6 701 aaKnown RBP6.95□□□□□ -1.3
CCDC178-209ENST00000579947 ADAMTS9Q9P2N4 1935 aa6.95□□□□□ -1.3
CCDC178-209ENST00000579947 B4E1Z4 1266 aa6.95□□□□□ -1.3
CCDC178-209ENST00000579947 OPLAHO14841 1288 aa6.95□□□□□ -1.3
CCDC178-209ENST00000579947 GJB3O75712 270 aa6.95□□□□□ -1.3
CCDC178-209ENST00000579947 ALDH2P05091 517 aa6.95□□□□□ -1.3
CCDC178-209ENST00000579947 SLC3A2P08195 630 aaKnown RBP6.95□□□□□ -1.3
CCDC178-209ENST00000579947 CTHP32929 405 aa6.95□□□□□ -1.3
CCDC178-209ENST00000579947 KPNA1P52294 538 aaPredicted RBP6.95□□□□□ -1.3
CCDC178-209ENST00000579947 PON2Q15165 354 aa6.95□□□□□ -1.3
CCDC178-209ENST00000579947 LIN9Q5TKA1 542 aa6.95□□□□□ -1.3
CCDC178-209ENST00000579947 TXNDC11Q6PKC3 985 aa6.95□□□□□ -1.3
CCDC178-209ENST00000579947 MARCH9Q86YJ5 346 aa6.95□□□□□ -1.3
CCDC178-209ENST00000579947 HHIPQ96QV1 700 aa6.95□□□□□ -1.3
CCDC178-209ENST00000579947 TRPV4Q9HBA0 871 aa6.95□□□□□ -1.3
CCDC178-209ENST00000579947 DDX52Q9Y2R4 599 aaKnown RBP eCLIP6.95□□□□□ -1.3
CCDC178-209ENST00000579947 COL1A2P08123 1366 aa6.94□□□□□ -1.3
CCDC178-209ENST00000579947 TULP1O00294 542 aaPredicted RBP6.94□□□□□ -1.3
CCDC178-209ENST00000579947 NRP1O14786 923 aa6.94□□□□□ -1.3
CCDC178-209ENST00000579947 NMT2O60551 498 aa6.94□□□□□ -1.3
CCDC178-209ENST00000579947 OFD1O75665 1012 aa6.94□□□□□ -1.3
CCDC178-209ENST00000579947 GNAI2P04899 355 aa6.94□□□□□ -1.3
CCDC178-209ENST00000579947 CEBPBP17676 345 aa6.94□□□□□ -1.3
CCDC178-209ENST00000579947 UCNP55089 124 aa6.94□□□□□ -1.3
CCDC178-209ENST00000579947 SP4Q02446 784 aa6.94□□□□□ -1.3
CCDC178-209ENST00000579947 USP39Q53GS9 565 aaKnown RBP6.94□□□□□ -1.3
CCDC178-209ENST00000579947 TICAM1Q8IUC6 712 aa6.94□□□□□ -1.3
CCDC178-209ENST00000579947 MFSD6LQ8IWD5 586 aa6.94□□□□□ -1.3
CCDC178-209ENST00000579947 PLEKHM2Q8IWE5 1019 aa6.94□□□□□ -1.3
CCDC178-209ENST00000579947 CMTR1Q8N1G2 835 aaKnown RBP6.94□□□□□ -1.3
CCDC178-209ENST00000579947 ASB16Q96NS5 453 aa6.94□□□□□ -1.3
CCDC178-209ENST00000579947 GTPBP2Q9BX10 602 aaKnown RBP6.94□□□□□ -1.3
CCDC178-209ENST00000579947 CAPN10Q9HC96 672 aa6.94□□□□□ -1.3
CCDC178-209ENST00000579947 CHST12Q9NRB3 414 aa6.94□□□□□ -1.3
CCDC178-209ENST00000579947 DACT1Q9NYF0 836 aa6.94□□□□□ -1.3
CCDC178-209ENST00000579947 SERPINF2P08697 491 aa6.94□□□□□ -1.3
CCDC178-209ENST00000579947 BCKDHBP21953 392 aa6.94□□□□□ -1.3
CCDC178-209ENST00000579947 TMPRSS3P57727 454 aa6.94□□□□□ -1.3
CCDC178-209ENST00000579947 MRPS9P82933 396 aaKnown RBP6.94□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 65.2 ms