RNA–Protein interactions for RNA: ENST00000579716.2

COPS3-216, Transcript of COP9 signalosome subunit 3, humanhuman

TSL 2

Gene COPS3, Length 419 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3-216ENST00000579716 IL1RL1Q01638 556 aa7.16□□□□□ -1.26
COPS3-216ENST00000579716 RELQ04864 619 aaPredicted RBP7.16□□□□□ -1.26
COPS3-216ENST00000579716 PWP1Q13610 501 aa7.16□□□□□ -1.26
COPS3-216ENST00000579716 GALEQ14376 348 aa7.16□□□□□ -1.26
COPS3-216ENST00000579716 PROSER3Q2NL68 480 aa7.16□□□□□ -1.26
COPS3-216ENST00000579716 CFAP100Q494V2 611 aa7.16□□□□□ -1.26
COPS3-216ENST00000579716 SH2D4BQ5SQS7 431 aa7.16□□□□□ -1.26
COPS3-216ENST00000579716 FCRLBQ6BAA4 426 aa7.16□□□□□ -1.26
COPS3-216ENST00000579716 CYB5RLQ6IPT4 315 aa7.16□□□□□ -1.26
COPS3-216ENST00000579716 MPZL3Q6UWV2 235 aa7.16□□□□□ -1.26
COPS3-216ENST00000579716 EPM2AIP1Q7L775 607 aaPredicted RBP7.16□□□□□ -1.26
COPS3-216ENST00000579716 SPATA2LQ8IUW3 424 aaPredicted RBP7.16□□□□□ -1.26
COPS3-216ENST00000579716 UNC45BQ8IWX7 931 aa7.16□□□□□ -1.26
COPS3-216ENST00000579716 LINC00469Q8N7U9 141 aa7.16□□□□□ -1.26
COPS3-216ENST00000579716 TRIM58Q8NG06 486 aa7.16□□□□□ -1.26
COPS3-216ENST00000579716 SLC30A5Q8TAD4 765 aa7.16□□□□□ -1.26
COPS3-216ENST00000579716 ZSCAN18Q8TBC5 510 aaPredicted RBP7.16□□□□□ -1.26
COPS3-216ENST00000579716 DIS3LQ8TF46 1054 aaKnown RBP7.16□□□□□ -1.26
COPS3-216ENST00000579716 RABGGTAQ92696 567 aa7.16□□□□□ -1.26
COPS3-216ENST00000579716 EAF1Q96JC9 268 aaPredicted RBP7.16□□□□□ -1.26
COPS3-216ENST00000579716 SGCZQ96LD1 299 aa7.16□□□□□ -1.26
COPS3-216ENST00000579716 C20orf173Q96LM9 149 aa7.16□□□□□ -1.26
COPS3-216ENST00000579716 CEP295NLQ96MC4 621 aa7.16□□□□□ -1.26
COPS3-216ENST00000579716 C16orf45Q96MC5 204 aaPredicted RBP7.16□□□□□ -1.26
COPS3-216ENST00000579716 GPATCH1Q9BRR8 931 aaKnown RBP7.16□□□□□ -1.26
COPS3-216ENST00000579716 TARS2Q9BW92 718 aaKnown RBP7.16□□□□□ -1.26
COPS3-216ENST00000579716 STMN4Q9H169 189 aaPredicted RBP7.16□□□□□ -1.26
COPS3-216ENST00000579716 MROH8Q9H579 483 aa7.16□□□□□ -1.26
COPS3-216ENST00000579716 RABEP2Q9H5N1 569 aa7.16□□□□□ -1.26
COPS3-216ENST00000579716 NSUN3Q9H649 340 aaKnown RBP7.16□□□□□ -1.26
COPS3-216ENST00000579716 ARFGAP3Q9NP61 516 aa7.16□□□□□ -1.26
COPS3-216ENST00000579716 PPP4R2Q9NY27 417 aa7.16□□□□□ -1.26
COPS3-216ENST00000579716 CNPY2Q9Y2B0 182 aa7.16□□□□□ -1.26
COPS3-216ENST00000579716 SPAG9O60271 1321 aaKnown RBP7.16□□□□□ -1.26
COPS3-216ENST00000579716 WASH4PA8MWX3 477 aa7.15□□□□□ -1.26
COPS3-216ENST00000579716 NPIPB6E9PJ23 425 aa7.15□□□□□ -1.26
COPS3-216ENST00000579716 H3BS24 57 aa7.15□□□□□ -1.26
COPS3-216ENST00000579716 UBXN8O00124 270 aa7.15□□□□□ -1.26
COPS3-216ENST00000579716 AP3B1O00203 1094 aa7.15□□□□□ -1.26
COPS3-216ENST00000579716 CACNB4O00305 520 aaPredicted RBP7.15□□□□□ -1.26
COPS3-216ENST00000579716 CTNND1O60716 968 aaKnown RBP7.15□□□□□ -1.26
COPS3-216ENST00000579716 PLATP00750 562 aa7.15□□□□□ -1.26
COPS3-216ENST00000579716 RWDD2BP57060 319 aa7.15□□□□□ -1.26
COPS3-216ENST00000579716 GPR85P60893 370 aa7.15□□□□□ -1.26
COPS3-216ENST00000579716 CYP4A11Q02928 519 aa7.15□□□□□ -1.26
COPS3-216ENST00000579716 STAT4Q14765 748 aa7.15□□□□□ -1.26
COPS3-216ENST00000579716 PPA1Q15181 289 aa7.15□□□□□ -1.26
COPS3-216ENST00000579716 KIAA0753Q2KHM9 967 aa7.15□□□□□ -1.26
COPS3-216ENST00000579716 PCNX4Q63HM2 1172 aa7.15□□□□□ -1.26
COPS3-216ENST00000579716 CNNM4Q6P4Q7 775 aa7.15□□□□□ -1.26
COPS3-216ENST00000579716 SPATC1Q76KD6 591 aa7.15□□□□□ -1.26
COPS3-216ENST00000579716 KRT74Q7RTS7 529 aa7.15□□□□□ -1.26
COPS3-216ENST00000579716 TMEM110Q86TL2 294 aa7.15□□□□□ -1.26
COPS3-216ENST00000579716 CCDC84Q86UT8 332 aaPredicted RBP7.15□□□□□ -1.26
COPS3-216ENST00000579716 CNTD1Q8N815 330 aa7.15□□□□□ -1.26
COPS3-216ENST00000579716 PCYOX1LQ8NBM8 494 aa7.15□□□□□ -1.26
COPS3-216ENST00000579716 FBXO15Q8NCQ5 510 aaPredicted RBP7.15□□□□□ -1.26
COPS3-216ENST00000579716 IPMKQ8NFU5 416 aa7.15□□□□□ -1.26
COPS3-216ENST00000579716 CTCFLQ8NI51 663 aaPredicted RBP7.15□□□□□ -1.26
COPS3-216ENST00000579716 LEO1Q8WVC0 666 aaPredicted RBP7.15□□□□□ -1.26
COPS3-216ENST00000579716 ZNF669Q96BR6 464 aaPredicted RBP7.15□□□□□ -1.26
COPS3-216ENST00000579716 SHDQ96IW2 340 aa7.15□□□□□ -1.26
COPS3-216ENST00000579716 COG3Q96JB2 828 aa7.15□□□□□ -1.26
COPS3-216ENST00000579716 VPS39Q96JC1 886 aa7.15□□□□□ -1.26
COPS3-216ENST00000579716 TIGD1Q96MW7 591 aa7.15□□□□□ -1.26
COPS3-216ENST00000579716 FAM193BQ96PV7 902 aaPredicted RBP7.15□□□□□ -1.26
COPS3-216ENST00000579716 RSRP1Q9BUV0 290 aa7.15□□□□□ -1.26
COPS3-216ENST00000579716 WDR12Q9GZL7 423 aaKnown RBP7.15□□□□□ -1.26
COPS3-216ENST00000579716 TNMDQ9H2S6 317 aa7.15□□□□□ -1.26
COPS3-216ENST00000579716 EHMT1Q9H9B1 1298 aa7.15□□□□□ -1.26
COPS3-216ENST00000579716 PPP1R14DQ9NXH3 145 aa7.15□□□□□ -1.26
COPS3-216ENST00000579716 STK39Q9UEW8 545 aa7.15□□□□□ -1.26
COPS3-216ENST00000579716 ZMYM5Q9UJ78 669 aa7.15□□□□□ -1.26
COPS3-216ENST00000579716 PCDHA4Q9UN74 947 aa7.15□□□□□ -1.26
COPS3-216ENST00000579716 SSX2IPQ9Y2D8 614 aa7.15□□□□□ -1.26
COPS3-216ENST00000579716 SGK1O00141 431 aa7.14□□□□□ -1.27
COPS3-216ENST00000579716 AHCYL1O43865 530 aa7.14□□□□□ -1.27
COPS3-216ENST00000579716 FOXD2O60548 495 aaPredicted RBP7.14□□□□□ -1.27
COPS3-216ENST00000579716 GOSR1O95249 250 aa7.14□□□□□ -1.27
COPS3-216ENST00000579716 ESR1P03372 595 aa7.14□□□□□ -1.27
COPS3-216ENST00000579716 PDHA1P08559 390 aa7.14□□□□□ -1.27
COPS3-216ENST00000579716 MED14OSP0DP75 135 aa7.14□□□□□ -1.27
COPS3-216ENST00000579716 MYBL2P10244 700 aa7.14□□□□□ -1.27
COPS3-216ENST00000579716 PCP11498 1178 aaKnown RBP7.14□□□□□ -1.27
COPS3-216ENST00000579716 ARF4P18085 180 aaPredicted RBP7.14□□□□□ -1.27
COPS3-216ENST00000579716 HDCP19113 662 aa7.14□□□□□ -1.27
COPS3-216ENST00000579716 LPOP22079 712 aaPredicted RBP7.14□□□□□ -1.27
COPS3-216ENST00000579716 PSMA4P25789 261 aaKnown RBP7.14□□□□□ -1.27
COPS3-216ENST00000579716 HSD17B2P37059 387 aa7.14□□□□□ -1.27
COPS3-216ENST00000579716 SULT1E1P49888 294 aa7.14□□□□□ -1.27
COPS3-216ENST00000579716 ETV1P50549 477 aa7.14□□□□□ -1.27
COPS3-216ENST00000579716 CLCN2P51788 898 aa7.14□□□□□ -1.27
COPS3-216ENST00000579716 KIF5AQ12840 1032 aa7.14□□□□□ -1.27
COPS3-216ENST00000579716 SEPT6Q14141 434 aa7.14□□□□□ -1.27
COPS3-216ENST00000579716 PDIA5Q14554 519 aa7.14□□□□□ -1.27
COPS3-216ENST00000579716 TAF12Q16514 161 aa7.14□□□□□ -1.27
COPS3-216ENST00000579716 MEA1Q16626 185 aa7.14□□□□□ -1.27
COPS3-216ENST00000579716 CLPPQ16740 277 aaPredicted RBP7.14□□□□□ -1.27
COPS3-216ENST00000579716 KBTBD12Q3ZCT8 623 aa7.14□□□□□ -1.27
COPS3-216ENST00000579716 RALGPS1Q5JS13 557 aa7.14□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms