RNA–Protein interactions for RNA: ENST00000579662.5

ITGB4-206, Transcript of integrin subunit beta 4, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene ITGB4, Length 5,554 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB4-206ENST00000579662 TAF1DQ9H5J8 278 aaPredicted RBP16.14■□□□□ 0.17
ITGB4-206ENST00000579662 DNAJC17Q9NVM6 304 aaKnown RBP16.14■□□□□ 0.17
ITGB4-206ENST00000579662 HSPA4LO95757 839 aa16.14■□□□□ 0.17
ITGB4-206ENST00000579662 PDCD7Q8N8D1 485 aaKnown RBP16.14■□□□□ 0.17
ITGB4-206ENST00000579662 MKNK1Q9BUB5 465 aa16.14■□□□□ 0.17
ITGB4-206ENST00000579662 IL18RAPO95256 599 aa16.14■□□□□ 0.17
ITGB4-206ENST00000579662 FMO5P49326 533 aa16.14■□□□□ 0.17
ITGB4-206ENST00000579662 NCK2O43639 380 aa16.13■□□□□ 0.17
ITGB4-206ENST00000579662 CREB3O43889 395 aa16.13■□□□□ 0.17
ITGB4-206ENST00000579662 KRT14P02533 472 aa16.13■□□□□ 0.17
ITGB4-206ENST00000579662 RPA1P27694 616 aa16.13■□□□□ 0.17
ITGB4-206ENST00000579662 SLC18A3Q16572 532 aa16.13■□□□□ 0.17
ITGB4-206ENST00000579662 GGA3Q9NZ52 723 aa16.13■□□□□ 0.17
ITGB4-206ENST00000579662 PCSK1NQ9UHG2 260 aa16.13■□□□□ 0.17
ITGB4-206ENST00000579662 MAD2L2Q9UI95 211 aa16.13■□□□□ 0.17
ITGB4-206ENST00000579662 RRP15Q9Y3B9 282 aaKnown RBP16.13■□□□□ 0.17
ITGB4-206ENST00000579662 MYMKA6NI61 221 aa16.13■□□□□ 0.17
ITGB4-206ENST00000579662 RASA4BC9J798 803 aa16.13■□□□□ 0.17
ITGB4-206ENST00000579662 RASA4O43374 803 aa16.13■□□□□ 0.17
ITGB4-206ENST00000579662 FDPSP14324 419 aaKnown RBP16.13■□□□□ 0.17
ITGB4-206ENST00000579662 GMPSP49915 693 aaPredicted RBP16.13■□□□□ 0.17
ITGB4-206ENST00000579662 POLR3CQ9BUI4 534 aaPredicted RBP16.13■□□□□ 0.17
ITGB4-206ENST00000579662 ANKEF1Q9NU02 776 aa16.13■□□□□ 0.17
ITGB4-206ENST00000579662 P4HA2O15460 535 aa16.13■□□□□ 0.17
ITGB4-206ENST00000579662 TRIM68Q6AZZ1 485 aa16.13■□□□□ 0.17
ITGB4-206ENST00000579662 WDR75Q8IWA0 830 aaKnown RBP16.13■□□□□ 0.17
ITGB4-206ENST00000579662 TRIM59Q8IWR1 403 aa16.13■□□□□ 0.17
ITGB4-206ENST00000579662 CPSF2Q9P2I0 782 aaKnown RBP16.13■□□□□ 0.17
ITGB4-206ENST00000579662 ART3Q13508 389 aa16.13■□□□□ 0.17
ITGB4-206ENST00000579662 SGSM1Q2NKQ1 1148 aa16.13■□□□□ 0.17
ITGB4-206ENST00000579662 PGBD4Q96DM1 585 aa16.13■□□□□ 0.17
ITGB4-206ENST00000579662 TRIM55Q9BYV6 548 aa16.13■□□□□ 0.17
ITGB4-206ENST00000579662 FNDC3AQ9Y2H6 1198 aaKnown RBP16.13■□□□□ 0.17
ITGB4-206ENST00000579662 A0A1W2PQJ5 194 aa16.13■□□□□ 0.17
ITGB4-206ENST00000579662 GSTA4O15217 222 aa16.13■□□□□ 0.17
ITGB4-206ENST00000579662 CYP26A1O43174 497 aa16.13■□□□□ 0.17
ITGB4-206ENST00000579662 MMEP08473 750 aa16.13■□□□□ 0.17
ITGB4-206ENST00000579662 ZNF211Q13398 564 aaPredicted RBP16.13■□□□□ 0.17
ITGB4-206ENST00000579662 CCDC137Q6PK04 289 aaKnown RBP16.13■□□□□ 0.17
ITGB4-206ENST00000579662 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP16.13■□□□□ 0.17
ITGB4-206ENST00000579662 PIN4Q9Y237 131 aaKnown RBP16.13■□□□□ 0.17
ITGB4-206ENST00000579662 ZBTB12Q9Y330 459 aaPredicted RBP16.13■□□□□ 0.17
ITGB4-206ENST00000579662 NVLO15381 856 aaKnown RBP16.12■□□□□ 0.17
ITGB4-206ENST00000579662 TRAPPC3O43617 180 aa16.12■□□□□ 0.17
ITGB4-206ENST00000579662 RALAP11233 206 aa16.12■□□□□ 0.17
ITGB4-206ENST00000579662 SNRNP35Q16560 246 aaKnown RBP16.12■□□□□ 0.17
ITGB4-206ENST00000579662 MAML1Q92585 1016 aa16.12■□□□□ 0.17
ITGB4-206ENST00000579662 GPRASP2Q96D09 838 aa16.12■□□□□ 0.17
ITGB4-206ENST00000579662 DEPDC5O75140 1603 aa16.12■□□□□ 0.17
ITGB4-206ENST00000579662 SPDYE2BA6NHP3 402 aa16.12■□□□□ 0.17
ITGB4-206ENST00000579662 CLGNO14967 610 aa16.12■□□□□ 0.17
ITGB4-206ENST00000579662 SPDYE6P0CI01 402 aa16.12■□□□□ 0.17
ITGB4-206ENST00000579662 CDK17Q00537 523 aa16.12■□□□□ 0.17
ITGB4-206ENST00000579662 FMR1Q06787 632 aaKnown RBP eCLIP16.12■□□□□ 0.17
ITGB4-206ENST00000579662 TAF1CQ15572 869 aaPredicted RBP16.12■□□□□ 0.17
ITGB4-206ENST00000579662 CLEC10AQ8IUN9 316 aa16.12■□□□□ 0.17
ITGB4-206ENST00000579662 SAMD3Q8N6K7 520 aa16.12■□□□□ 0.17
ITGB4-206ENST00000579662 AFG1LQ8WV93 481 aa16.12■□□□□ 0.17
ITGB4-206ENST00000579662 PITPNM3Q9BZ71 974 aa16.12■□□□□ 0.17
ITGB4-206ENST00000579662 ORC6Q9Y5N6 252 aa16.12■□□□□ 0.17
ITGB4-206ENST00000579662 WDR91A4D1P6 747 aa16.12■□□□□ 0.17
ITGB4-206ENST00000579662 NUGGCQ68CJ6 796 aa16.12■□□□□ 0.17
ITGB4-206ENST00000579662 ATP11CQ8NB49 1132 aa16.12■□□□□ 0.17
ITGB4-206ENST00000579662 KCNB2Q92953 911 aa16.12■□□□□ 0.17
ITGB4-206ENST00000579662 HPS5Q9UPZ3 1129 aa16.12■□□□□ 0.17
ITGB4-206ENST00000579662 APOL1O14791 398 aa16.12■□□□□ 0.17
ITGB4-206ENST00000579662 PPP1R12AO14974 1030 aaPredicted RBP16.12■□□□□ 0.17
ITGB4-206ENST00000579662 CHGBP05060 677 aa16.12■□□□□ 0.17
ITGB4-206ENST00000579662 ESRRAP11474 423 aaPredicted RBP16.12■□□□□ 0.17
ITGB4-206ENST00000579662 TMPRSS15P98073 1019 aa16.12■□□□□ 0.17
ITGB4-206ENST00000579662 PRKCEQ02156 737 aa16.12■□□□□ 0.17
ITGB4-206ENST00000579662 BTBD8Q5XKL5 378 aa16.12■□□□□ 0.17
ITGB4-206ENST00000579662 EPM2AIP1Q7L775 607 aaPredicted RBP16.12■□□□□ 0.17
ITGB4-206ENST00000579662 FIS1Q9Y3D6 152 aa16.12■□□□□ 0.17
ITGB4-206ENST00000579662 KIF20BQ96Q89 1820 aa16.12■□□□□ 0.17
ITGB4-206ENST00000579662 GPS1Q13098 491 aa16.11■□□□□ 0.17
ITGB4-206ENST00000579662 DRP2Q13474 957 aa16.11■□□□□ 0.17
ITGB4-206ENST00000579662 SLC15A2Q16348 729 aa16.11■□□□□ 0.17
ITGB4-206ENST00000579662 TEX2Q8IWB9 1127 aa16.11■□□□□ 0.17
ITGB4-206ENST00000579662 RCOR2Q8IZ40 523 aa16.11■□□□□ 0.17
ITGB4-206ENST00000579662 SH3TC2Q8TF17 1288 aa16.11■□□□□ 0.17
ITGB4-206ENST00000579662 CTDNEP1O95476 244 aa16.11■□□□□ 0.17
ITGB4-206ENST00000579662 CETPP11597 493 aa16.11■□□□□ 0.17
ITGB4-206ENST00000579662 DPEP1P16444 411 aa16.11■□□□□ 0.17
ITGB4-206ENST00000579662 NCF2P19878 526 aaPredicted RBP16.11■□□□□ 0.17
ITGB4-206ENST00000579662 NR1I3Q14994 352 aa16.11■□□□□ 0.17
ITGB4-206ENST00000579662 TMEM132DQ14C87 1099 aa16.11■□□□□ 0.17
ITGB4-206ENST00000579662 FAM133BQ5BKY9 247 aaKnown RBP16.11■□□□□ 0.17
ITGB4-206ENST00000579662 TADA2BQ86TJ2 420 aa16.11■□□□□ 0.17
ITGB4-206ENST00000579662 TRIM15Q9C019 465 aa16.11■□□□□ 0.17
ITGB4-206ENST00000579662 EIF2AK3Q9NZJ5 1116 aaKnown RBP16.11■□□□□ 0.17
ITGB4-206ENST00000579662 RGL2O15211 777 aa16.11■□□□□ 0.17
ITGB4-206ENST00000579662 MOXD1Q6UVY6 613 aa16.11■□□□□ 0.17
ITGB4-206ENST00000579662 PDZD8Q8NEN9 1154 aa16.11■□□□□ 0.17
ITGB4-206ENST00000579662 TMEM143Q96AN5 459 aa16.11■□□□□ 0.17
ITGB4-206ENST00000579662 DDX47Q9H0S4 455 aaKnown RBP16.11■□□□□ 0.17
ITGB4-206ENST00000579662 DHX35Q9H5Z1 703 aaKnown RBP16.11■□□□□ 0.17
ITGB4-206ENST00000579662 SP110Q9HB58 689 aa16.11■□□□□ 0.17
ITGB4-206ENST00000579662 BFARQ9NZS9 450 aa16.11■□□□□ 0.17
ITGB4-206ENST00000579662 MEGF6O75095 1541 aa16.11■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms