RNA–Protein interactions for RNA: ENST00000579308.1

CSNK1D-210, Transcript of casein kinase 1 delta, humanhuman

TSL 2

Gene CSNK1D, Length 598 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1D-210ENST00000579308 ASCL5Q7RTU5 278 aa11.85□□□□□ -0.51
CSNK1D-210ENST00000579308 GPR65Q8IYL9 337 aa11.85□□□□□ -0.51
CSNK1D-210ENST00000579308 HDAC7Q8WUI4 952 aa11.85□□□□□ -0.51
CSNK1D-210ENST00000579308 ZNF707Q96C28 371 aaPredicted RBP11.85□□□□□ -0.51
CSNK1D-210ENST00000579308 MTMR9Q96QG7 549 aa11.85□□□□□ -0.51
CSNK1D-210ENST00000579308 IGSF9Q9P2J2 1179 aa11.85□□□□□ -0.51
CSNK1D-210ENST00000579308 EPS15L1Q9UBC2 864 aa11.85□□□□□ -0.51
CSNK1D-210ENST00000579308 PCDHA12Q9UN75 941 aa11.85□□□□□ -0.51
CSNK1D-210ENST00000579308 DUSP12Q9UNI6 340 aa11.85□□□□□ -0.51
CSNK1D-210ENST00000579308 INO80B-WBP1J3KQ70 363 aa11.84□□□□□ -0.51
CSNK1D-210ENST00000579308 WNT7AO00755 349 aa11.84□□□□□ -0.51
CSNK1D-210ENST00000579308 B4GALT5O43286 388 aa11.84□□□□□ -0.51
CSNK1D-210ENST00000579308 ADH1AP07327 375 aa11.84□□□□□ -0.51
CSNK1D-210ENST00000579308 AOC1P19801 751 aa11.84□□□□□ -0.51
CSNK1D-210ENST00000579308 KRT2P35908 639 aa11.84□□□□□ -0.51
CSNK1D-210ENST00000579308 GLUD2P49448 558 aa11.84□□□□□ -0.51
CSNK1D-210ENST00000579308 RARRES1P49788 294 aa11.84□□□□□ -0.51
CSNK1D-210ENST00000579308 NCBP1Q09161 790 aaKnown RBP11.84□□□□□ -0.51
CSNK1D-210ENST00000579308 TFDP1Q14186 410 aa11.84□□□□□ -0.51
CSNK1D-210ENST00000579308 WASF1Q92558 559 aa11.84□□□□□ -0.51
CSNK1D-210ENST00000579308 COLEC11Q9BWP8 271 aa11.84□□□□□ -0.51
CSNK1D-210ENST00000579308 GPR62Q9BZJ7 368 aa11.84□□□□□ -0.51
CSNK1D-210ENST00000579308 MFSD1Q9H3U5 465 aa11.84□□□□□ -0.51
CSNK1D-210ENST00000579308 NXF3Q9H4D5 531 aaKnown RBP11.84□□□□□ -0.51
CSNK1D-210ENST00000579308 TTC12Q9H892 705 aaPredicted RBP11.84□□□□□ -0.51
CSNK1D-210ENST00000579308 DPP7Q9UHL4 492 aa11.84□□□□□ -0.51
CSNK1D-210ENST00000579308 WDR87Q6ZQQ6 2873 aa11.83□□□□□ -0.52
CSNK1D-210ENST00000579308 A0A087WWV3 80 aa11.83□□□□□ -0.52
CSNK1D-210ENST00000579308 PRR23AA6NEV1 266 aa11.83□□□□□ -0.52
CSNK1D-210ENST00000579308 BTBD18B2RXH4 712 aa11.83□□□□□ -0.52
CSNK1D-210ENST00000579308 TGM5O43548 720 aa11.83□□□□□ -0.52
CSNK1D-210ENST00000579308 NARSO43776 548 aaKnown RBP11.83□□□□□ -0.52
CSNK1D-210ENST00000579308 NR1I2O75469 434 aa11.83□□□□□ -0.52
CSNK1D-210ENST00000579308 RFPL2O75678 378 aa11.83□□□□□ -0.52
CSNK1D-210ENST00000579308 GLUD1P00367 558 aa11.83□□□□□ -0.52
CSNK1D-210ENST00000579308 SPATA31D3P0C874 917 aa11.83□□□□□ -0.52
CSNK1D-210ENST00000579308 SPATA31C1P0DKV0 1188 aa11.83□□□□□ -0.52
CSNK1D-210ENST00000579308 AKAP5P24588 427 aa11.83□□□□□ -0.52
CSNK1D-210ENST00000579308 ANAPC15P60006 121 aa11.83□□□□□ -0.52
CSNK1D-210ENST00000579308 ANKRD1Q15327 319 aa11.83□□□□□ -0.52
CSNK1D-210ENST00000579308 CALCRLQ16602 461 aa11.83□□□□□ -0.52
CSNK1D-210ENST00000579308 ME3Q16798 604 aa11.83□□□□□ -0.52
CSNK1D-210ENST00000579308 SPATA31D4Q6ZUB0 917 aa11.83□□□□□ -0.52
CSNK1D-210ENST00000579308 SLC44A3Q8N4M1 653 aa11.83□□□□□ -0.52
CSNK1D-210ENST00000579308 NECAB1Q8N987 351 aa11.83□□□□□ -0.52
CSNK1D-210ENST00000579308 FLCNQ8NFG4 579 aa11.83□□□□□ -0.52
CSNK1D-210ENST00000579308 RSAD2Q8WXG1 361 aa11.83□□□□□ -0.52
CSNK1D-210ENST00000579308 B3GALT6Q96L58 329 aa11.83□□□□□ -0.52
CSNK1D-210ENST00000579308 MYADMQ96S97 322 aa11.83□□□□□ -0.52
CSNK1D-210ENST00000579308 NT5C3AQ9H0P0 336 aa11.83□□□□□ -0.52
CSNK1D-210ENST00000579308 PLEKHA4Q9H4M7 779 aa11.83□□□□□ -0.52
CSNK1D-210ENST00000579308 FNIP2Q9P278 1114 aa11.83□□□□□ -0.52
CSNK1D-210ENST00000579308 WNT16Q9UBV4 365 aa11.83□□□□□ -0.52
CSNK1D-210ENST00000579308 ZMYM2Q9UBW7 1377 aa11.82□□□□□ -0.52
CSNK1D-210ENST00000579308 SPDYE4A6NLX3 237 aa11.82□□□□□ -0.52
CSNK1D-210ENST00000579308 MYBP10242 640 aa11.82□□□□□ -0.52
CSNK1D-210ENST00000579308 USP41Q3LFD5 358 aa11.82□□□□□ -0.52
CSNK1D-210ENST00000579308 FUT10Q6P4F1 479 aa11.82□□□□□ -0.52
CSNK1D-210ENST00000579308 SLC27A1Q6PCB7 646 aa11.82□□□□□ -0.52
CSNK1D-210ENST00000579308 FRMD5Q7Z6J6 570 aa11.82□□□□□ -0.52
CSNK1D-210ENST00000579308 CDR2LQ86X02 465 aaPredicted RBP11.82□□□□□ -0.52
CSNK1D-210ENST00000579308 PALB2Q86YC2 1186 aa11.82□□□□□ -0.52
CSNK1D-210ENST00000579308 CCDC105Q8IYK2 499 aa11.82□□□□□ -0.52
CSNK1D-210ENST00000579308 SIX5Q8N196 739 aa11.82□□□□□ -0.52
CSNK1D-210ENST00000579308 NSUN7Q8NE18 718 aaKnown RBP11.82□□□□□ -0.52
CSNK1D-210ENST00000579308 PIGOQ8TEQ8 1089 aa11.82□□□□□ -0.52
CSNK1D-210ENST00000579308 SMG7Q92540 1137 aaKnown RBP11.82□□□□□ -0.52
CSNK1D-210ENST00000579308 GTF3C6Q969F1 213 aa11.82□□□□□ -0.52
CSNK1D-210ENST00000579308 NXPE3Q969Y0 559 aa11.82□□□□□ -0.52
CSNK1D-210ENST00000579308 SNX27Q96L92 541 aa11.82□□□□□ -0.52
CSNK1D-210ENST00000579308 RTP3Q9BQQ7 232 aa11.82□□□□□ -0.52
CSNK1D-210ENST00000579308 APOL6Q9BWW8 343 aa11.82□□□□□ -0.52
CSNK1D-210ENST00000579308 POLR3FQ9H1D9 316 aaPredicted RBP11.82□□□□□ -0.52
CSNK1D-210ENST00000579308 FZD8Q9H461 694 aa11.82□□□□□ -0.52
CSNK1D-210ENST00000579308 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP11.82□□□□□ -0.52
CSNK1D-210ENST00000579308 ADAM28Q9UKQ2 775 aa11.82□□□□□ -0.52
CSNK1D-210ENST00000579308 CLUHO75153 1309 aa11.82□□□□□ -0.52
CSNK1D-210ENST00000579308 KRBA1A5PL33 1030 aa11.81□□□□□ -0.52
CSNK1D-210ENST00000579308 ANHXE9PGG2 379 aa11.81□□□□□ -0.52
CSNK1D-210ENST00000579308 NEMFO60524 1076 aa11.81□□□□□ -0.52
CSNK1D-210ENST00000579308 LARGE1O95461 756 aa11.81□□□□□ -0.52
CSNK1D-210ENST00000579308 NPTXRO95502 500 aa11.81□□□□□ -0.52
CSNK1D-210ENST00000579308 LAMP2P13473 410 aa11.81□□□□□ -0.52
CSNK1D-210ENST00000579308 TXKP42681 527 aa11.81□□□□□ -0.52
CSNK1D-210ENST00000579308 GRIK3Q13003 919 aa11.81□□□□□ -0.52
CSNK1D-210ENST00000579308 FAM187BQ17R55 369 aa11.81□□□□□ -0.52
CSNK1D-210ENST00000579308 CDCA2Q69YH5 1023 aaPredicted RBP11.81□□□□□ -0.52
CSNK1D-210ENST00000579308 ELMSAN1Q6PJG2 1045 aa11.81□□□□□ -0.52
CSNK1D-210ENST00000579308 CATSPER3Q86XQ3 398 aa11.81□□□□□ -0.52
CSNK1D-210ENST00000579308 HACE1Q8IYU2 909 aa11.81□□□□□ -0.52
CSNK1D-210ENST00000579308 DTWD2Q8NBA8 298 aa11.81□□□□□ -0.52
CSNK1D-210ENST00000579308 RABGGTAQ92696 567 aa11.81□□□□□ -0.52
CSNK1D-210ENST00000579308 STAMQ92783 540 aa11.81□□□□□ -0.52
CSNK1D-210ENST00000579308 PAAF1Q9BRP4 392 aa11.81□□□□□ -0.52
CSNK1D-210ENST00000579308 PRKD2Q9BZL6 878 aa11.81□□□□□ -0.52
CSNK1D-210ENST00000579308 TRIM6Q9C030 488 aaPredicted RBP11.81□□□□□ -0.52
CSNK1D-210ENST00000579308 TMEM60Q9H2L4 133 aa11.81□□□□□ -0.52
CSNK1D-210ENST00000579308 BRMS1Q9HCU9 246 aa11.81□□□□□ -0.52
CSNK1D-210ENST00000579308 GPRC5CQ9NQ84 441 aa11.81□□□□□ -0.52
CSNK1D-210ENST00000579308 ZDHHC7Q9NXF8 308 aa11.81□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms