RNA–Protein interactions for RNA: ENST00000579238.1

CASC3-206, Transcript of CASC3, exon junction complex subunit, humanhuman

TSL 2

Gene CASC3, Length 517 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC3-206ENST00000579238 ANHXE9PGG2 379 aa9.52□□□□□ -0.89
CASC3-206ENST00000579238 F8W810 466 aa9.52□□□□□ -0.89
CASC3-206ENST00000579238 INO80B-WBP1J3KQ70 363 aa9.52□□□□□ -0.89
CASC3-206ENST00000579238 EPB41L2O43491 1005 aaKnown RBP9.52□□□□□ -0.89
CASC3-206ENST00000579238 TGM5O43548 720 aa9.52□□□□□ -0.89
CASC3-206ENST00000579238 MARCH6O60337 910 aa9.52□□□□□ -0.89
CASC3-206ENST00000579238 CCNT1O60563 726 aaKnown RBP9.52□□□□□ -0.89
CASC3-206ENST00000579238 SPATA31D3P0C874 917 aa9.52□□□□□ -0.89
CASC3-206ENST00000579238 MYBP10242 640 aa9.52□□□□□ -0.89
CASC3-206ENST00000579238 LAMP2P13473 410 aa9.52□□□□□ -0.89
CASC3-206ENST00000579238 XBP1P17861 261 aa9.52□□□□□ -0.89
CASC3-206ENST00000579238 CREMQ03060 361 aa9.52□□□□□ -0.89
CASC3-206ENST00000579238 TFDP1Q14186 410 aa9.52□□□□□ -0.89
CASC3-206ENST00000579238 CTTNQ14247 550 aaKnown RBP9.52□□□□□ -0.89
CASC3-206ENST00000579238 USP41Q3LFD5 358 aa9.52□□□□□ -0.89
CASC3-206ENST00000579238 NCAPH2Q6IBW4 605 aa9.52□□□□□ -0.89
CASC3-206ENST00000579238 FUT10Q6P4F1 479 aa9.52□□□□□ -0.89
CASC3-206ENST00000579238 LILRA6Q6PI73 481 aa9.52□□□□□ -0.89
CASC3-206ENST00000579238 SPATA31D4Q6ZUB0 917 aa9.52□□□□□ -0.89
CASC3-206ENST00000579238 GET4Q7L5D6 327 aaPredicted RBP9.52□□□□□ -0.89
CASC3-206ENST00000579238 PALB2Q86YC2 1186 aa9.52□□□□□ -0.89
CASC3-206ENST00000579238 SLFN12Q8IYM2 578 aa9.52□□□□□ -0.89
CASC3-206ENST00000579238 KCNG4Q8TDN1 519 aa9.52□□□□□ -0.89
CASC3-206ENST00000579238 GPR152Q8TDT2 470 aa9.52□□□□□ -0.89
CASC3-206ENST00000579238 DYDC2Q96IM9 177 aa9.52□□□□□ -0.89
CASC3-206ENST00000579238 CPB2Q96IY4 423 aa9.52□□□□□ -0.89
CASC3-206ENST00000579238 ZFP42Q96MM3 310 aa9.52□□□□□ -0.89
CASC3-206ENST00000579238 PHF20Q9BVI0 1012 aa9.52□□□□□ -0.89
CASC3-206ENST00000579238 APOL6Q9BWW8 343 aa9.52□□□□□ -0.89
CASC3-206ENST00000579238 GPR62Q9BZJ7 368 aa9.52□□□□□ -0.89
CASC3-206ENST00000579238 PRKD2Q9BZL6 878 aa9.52□□□□□ -0.89
CASC3-206ENST00000579238 TRIM6Q9C030 488 aaPredicted RBP9.52□□□□□ -0.89
CASC3-206ENST00000579238 XPNPEP1Q9NQW7 623 aa9.52□□□□□ -0.89
CASC3-206ENST00000579238 SLC2A4RGQ9NR83 387 aa9.52□□□□□ -0.89
CASC3-206ENST00000579238 SPTBN4Q9H254 2564 aa9.52□□□□□ -0.89
CASC3-206ENST00000579238 GVINP1Q7Z2Y8 2422 aa9.52□□□□□ -0.89
CASC3-206ENST00000579238 ZMYM2Q9UBW7 1377 aa9.51□□□□□ -0.89
CASC3-206ENST00000579238 DOCK8Q8NF50 2099 aa9.51□□□□□ -0.89
CASC3-206ENST00000579238 ZBTB39O15060 712 aa9.51□□□□□ -0.89
CASC3-206ENST00000579238 CDKL5O76039 1030 aa9.51□□□□□ -0.89
CASC3-206ENST00000579238 SLITRK3O94933 977 aa9.51□□□□□ -0.89
CASC3-206ENST00000579238 BAG4O95429 457 aaKnown RBP9.51□□□□□ -0.89
CASC3-206ENST00000579238 DCNP07585 359 aaKnown RBP9.51□□□□□ -0.89
CASC3-206ENST00000579238 ARF4P18085 180 aaPredicted RBP9.51□□□□□ -0.89
CASC3-206ENST00000579238 CYP4A11Q02928 519 aa9.51□□□□□ -0.89
CASC3-206ENST00000579238 MBTD1Q05BQ5 628 aa9.51□□□□□ -0.89
CASC3-206ENST00000579238 SPIRE1Q08AE8 756 aa9.51□□□□□ -0.89
CASC3-206ENST00000579238 GRIK3Q13003 919 aa9.51□□□□□ -0.89
CASC3-206ENST00000579238 STK3Q13188 491 aa9.51□□□□□ -0.89
CASC3-206ENST00000579238 HTR4Q13639 388 aa9.51□□□□□ -0.89
CASC3-206ENST00000579238 AMHR2Q16671 573 aa9.51□□□□□ -0.89
CASC3-206ENST00000579238 ZC3H14Q6PJT7 736 aaKnown RBP9.51□□□□□ -0.89
CASC3-206ENST00000579238 PIK3AP1Q6ZUJ8 805 aa9.51□□□□□ -0.89
CASC3-206ENST00000579238 POTEDQ86YR6 584 aa9.51□□□□□ -0.89
CASC3-206ENST00000579238 TPH2Q8IWU9 490 aa9.51□□□□□ -0.89
CASC3-206ENST00000579238 GSTCDQ8NEC7 633 aa9.51□□□□□ -0.89
CASC3-206ENST00000579238 RIN2Q8WYP3 895 aaPredicted RBP9.51□□□□□ -0.89
CASC3-206ENST00000579238 B3GALT6Q96L58 329 aa9.51□□□□□ -0.89
CASC3-206ENST00000579238 LARP6Q9BRS8 491 aaKnown RBP9.51□□□□□ -0.89
CASC3-206ENST00000579238 NFKBIZQ9BYH8 718 aa9.51□□□□□ -0.89
CASC3-206ENST00000579238 TM6SF1Q9BZW5 370 aa9.51□□□□□ -0.89
CASC3-206ENST00000579238 NXF3Q9H4D5 531 aaKnown RBP9.51□□□□□ -0.89
CASC3-206ENST00000579238 ARHGEF3Q9NR81 526 aa9.51□□□□□ -0.89
CASC3-206ENST00000579238 DLGAP2Q9P1A6 1054 aa9.51□□□□□ -0.89
CASC3-206ENST00000579238 ADAM28Q9UKQ2 775 aa9.51□□□□□ -0.89
CASC3-206ENST00000579238 SIT1Q9Y3P8 196 aa9.51□□□□□ -0.89
CASC3-206ENST00000579238 ZFP37Q9Y6Q3 630 aaPredicted RBP9.51□□□□□ -0.89
CASC3-206ENST00000579238 TADA2AO75478 443 aa9.5□□□□□ -0.89
CASC3-206ENST00000579238 ZMYND10O75800 440 aa9.5□□□□□ -0.89
CASC3-206ENST00000579238 DGAT1O75907 488 aa9.5□□□□□ -0.89
CASC3-206ENST00000579238 LYPLA2O95372 231 aa9.5□□□□□ -0.89
CASC3-206ENST00000579238 FSHRP23945 695 aa9.5□□□□□ -0.89
CASC3-206ENST00000579238 AKAP5P24588 427 aa9.5□□□□□ -0.89
CASC3-206ENST00000579238 ARL2P36404 184 aa9.5□□□□□ -0.89
CASC3-206ENST00000579238 CAPSQ13938 189 aa9.5□□□□□ -0.89
CASC3-206ENST00000579238 SPECC1Q5M775 1068 aa9.5□□□□□ -0.89
CASC3-206ENST00000579238 SLC27A1Q6PCB7 646 aa9.5□□□□□ -0.89
CASC3-206ENST00000579238 DCLRE1AQ6PJP8 1040 aa9.5□□□□□ -0.89
CASC3-206ENST00000579238 POTEGQ6S5H5 508 aa9.5□□□□□ -0.89
CASC3-206ENST00000579238 GLYCTKQ8IVS8 523 aa9.5□□□□□ -0.89
CASC3-206ENST00000579238 C1orf210Q8IVY1 113 aa9.5□□□□□ -0.89
CASC3-206ENST00000579238 ASAP3Q8TDY4 903 aa9.5□□□□□ -0.89
CASC3-206ENST00000579238 EIF2AK1Q9BQI3 630 aaKnown RBP9.5□□□□□ -0.89
CASC3-206ENST00000579238 ANKEF1Q9NU02 776 aa9.5□□□□□ -0.89
CASC3-206ENST00000579238 FBXW11Q9UKB1 542 aa9.5□□□□□ -0.89
CASC3-206ENST00000579238 NUMBLQ9Y6R0 609 aa9.5□□□□□ -0.89
CASC3-206ENST00000579238 R4GN57 208 aa9.5□□□□□ -0.89
CASC3-206ENST00000579238 SF3B1O75533 1304 aaKnown RBP eCLIP9.5□□□□□ -0.89
CASC3-206ENST00000579238 STK36Q9NRP7 1315 aa9.5□□□□□ -0.89
CASC3-206ENST00000579238 MTCL1Q9Y4B5 1905 aaKnown RBP9.49□□□□□ -0.89
CASC3-206ENST00000579238 EP300Q09472 2414 aaPredicted RBP9.49□□□□□ -0.89
CASC3-206ENST00000579238 A0A1B0GUA9 196 aa9.49□□□□□ -0.89
CASC3-206ENST00000579238 B4GALT5O43286 388 aa9.49□□□□□ -0.89
CASC3-206ENST00000579238 NPTXRO95502 500 aa9.49□□□□□ -0.89
CASC3-206ENST00000579238 HNRNPA1P09651 372 aaKnown RBP eCLIP9.49□□□□□ -0.89
CASC3-206ENST00000579238 SP9P0CG40 484 aa9.49□□□□□ -0.89
CASC3-206ENST00000579238 RPL17P18621 184 aaKnown RBP9.49□□□□□ -0.89
CASC3-206ENST00000579238 GLRA2P23416 452 aa9.49□□□□□ -0.89
CASC3-206ENST00000579238 RARRES1P49788 294 aa9.49□□□□□ -0.89
CASC3-206ENST00000579238 STARD6P59095 220 aa9.49□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms