RNA–Protein interactions for RNA: ENST00000578773.1

GGA3-206, Transcript of golgi associated, gamma adaptin ear containing, ARF binding protein 3, humanhuman

TSL 5

Gene GGA3, Length 432 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGA3-206ENST00000578773 KIF5BP33176 963 aa12.52□□□□□ -0.41
GGA3-206ENST00000578773 CNR2P34972 360 aa12.52□□□□□ -0.41
GGA3-206ENST00000578773 SOX9P48436 509 aa12.52□□□□□ -0.41
GGA3-206ENST00000578773 PTGDRQ13258 359 aa12.52□□□□□ -0.41
GGA3-206ENST00000578773 PPP2R5DQ14738 602 aa12.52□□□□□ -0.41
GGA3-206ENST00000578773 RTP2Q5QGT7 225 aa12.52□□□□□ -0.41
GGA3-206ENST00000578773 WDR5BQ86VZ2 330 aa12.52□□□□□ -0.41
GGA3-206ENST00000578773 DEFB124Q8NES8 71 aa12.52□□□□□ -0.41
GGA3-206ENST00000578773 URGCPQ8TCY9 931 aa12.52□□□□□ -0.41
GGA3-206ENST00000578773 CRELD1Q96HD1 420 aa12.52□□□□□ -0.41
GGA3-206ENST00000578773 PSTPIP2Q9H939 334 aa12.52□□□□□ -0.41
GGA3-206ENST00000578773 RSAD1Q9HA92 442 aa12.52□□□□□ -0.41
GGA3-206ENST00000578773 LY9Q9HBG7 655 aa12.52□□□□□ -0.41
GGA3-206ENST00000578773 DPP7Q9UHL4 492 aa12.52□□□□□ -0.41
GGA3-206ENST00000578773 PCDHB2Q9Y5E7 798 aa12.52□□□□□ -0.41
GGA3-206ENST00000578773 MAFBQ9Y5Q3 323 aaPredicted RBP12.52□□□□□ -0.41
GGA3-206ENST00000578773 TAF6LQ9Y6J9 622 aa12.52□□□□□ -0.41
GGA3-206ENST00000578773 PIAS3Q9Y6X2 628 aa12.52□□□□□ -0.41
GGA3-206ENST00000578773 TRIP11Q15643 1979 aa12.52□□□□□ -0.41
GGA3-206ENST00000578773 PI4KAP42356 2102 aa12.52□□□□□ -0.41
GGA3-206ENST00000578773 TMEM150BA6NC51 233 aa12.51□□□□□ -0.41
GGA3-206ENST00000578773 MAFGO15525 162 aa12.51□□□□□ -0.41
GGA3-206ENST00000578773 C1QL1O75973 258 aa12.51□□□□□ -0.41
GGA3-206ENST00000578773 UGCGQ16739 394 aa12.51□□□□□ -0.41
GGA3-206ENST00000578773 PPM1LQ5SGD2 360 aa12.51□□□□□ -0.41
GGA3-206ENST00000578773 UBXN11Q5T124 520 aa12.51□□□□□ -0.41
GGA3-206ENST00000578773 LARP1BQ659C4 914 aaKnown RBP12.51□□□□□ -0.41
GGA3-206ENST00000578773 KSR1Q8IVT5 923 aa12.51□□□□□ -0.41
GGA3-206ENST00000578773 SPEM1Q8N4L4 309 aa12.51□□□□□ -0.41
GGA3-206ENST00000578773 DNASE1L2Q92874 299 aa12.51□□□□□ -0.41
GGA3-206ENST00000578773 FAM193BQ96PV7 902 aaPredicted RBP12.51□□□□□ -0.41
GGA3-206ENST00000578773 SH2D3AQ9BRG2 576 aa12.51□□□□□ -0.41
GGA3-206ENST00000578773 BRD9Q9H8M2 597 aa12.51□□□□□ -0.41
GGA3-206ENST00000578773 GABBR1Q9UBS5 961 aa12.51□□□□□ -0.41
GGA3-206ENST00000578773 NEUROG3Q9Y4Z2 214 aa12.51□□□□□ -0.41
GGA3-206ENST00000578773 ARID2Q68CP9 1835 aa12.51□□□□□ -0.41
GGA3-206ENST00000578773 PTPRDP23468 1912 aa12.5□□□□□ -0.41
GGA3-206ENST00000578773 LNP1A1A4G5 178 aa12.5□□□□□ -0.41
GGA3-206ENST00000578773 SPDYE3A6NKU9 549 aa12.5□□□□□ -0.41
GGA3-206ENST00000578773 EXTL3O43909 919 aa12.5□□□□□ -0.41
GGA3-206ENST00000578773 ZNF623O75123 536 aa12.5□□□□□ -0.41
GGA3-206ENST00000578773 PAPSS2O95340 614 aaPredicted RBP12.5□□□□□ -0.41
GGA3-206ENST00000578773 PABPC1LQ4VXU2 614 aaKnown RBP12.5□□□□□ -0.41
GGA3-206ENST00000578773 MIS18BP1Q6P0N0 1132 aa12.5□□□□□ -0.41
GGA3-206ENST00000578773 FUT10Q6P4F1 479 aa12.5□□□□□ -0.41
GGA3-206ENST00000578773 TXNDC11Q6PKC3 985 aa12.5□□□□□ -0.41
GGA3-206ENST00000578773 SLC7A14Q8TBB6 771 aa12.5□□□□□ -0.41
GGA3-206ENST00000578773 HNRNPLLQ8WVV9 542 aaKnown RBP12.5□□□□□ -0.41
GGA3-206ENST00000578773 GAB3Q8WWW8 586 aa12.5□□□□□ -0.41
GGA3-206ENST00000578773 TCEAL4Q96EI5 215 aa12.5□□□□□ -0.41
GGA3-206ENST00000578773 ZFP42Q96MM3 310 aa12.5□□□□□ -0.41
GGA3-206ENST00000578773 CLSTN3Q9BQT9 956 aa12.5□□□□□ -0.41
GGA3-206ENST00000578773 IER2Q9BTL4 223 aa12.5□□□□□ -0.41
GGA3-206ENST00000578773 IL25Q9H293 177 aa12.5□□□□□ -0.41
GGA3-206ENST00000578773 RNF39Q9H2S5 420 aa12.5□□□□□ -0.41
GGA3-206ENST00000578773 ZNF334Q9HCZ1 680 aaPredicted RBP12.5□□□□□ -0.41
GGA3-206ENST00000578773 CHST12Q9NRB3 414 aa12.5□□□□□ -0.41
GGA3-206ENST00000578773 FNIP2Q9P278 1114 aa12.5□□□□□ -0.41
GGA3-206ENST00000578773 DACH1Q9UI36 760 aa12.5□□□□□ -0.41
GGA3-206ENST00000578773 SSX2IPQ9Y2D8 614 aa12.5□□□□□ -0.41
GGA3-206ENST00000578773 MSRB2Q9Y3D2 182 aa12.5□□□□□ -0.41
GGA3-206ENST00000578773 ZNF462Q96JM2 2506 aa12.49□□□□□ -0.41
GGA3-206ENST00000578773 SPAARA0A1B0GVQ0 90 aa12.49□□□□□ -0.41
GGA3-206ENST00000578773 MEIS1O00470 390 aa12.49□□□□□ -0.41
GGA3-206ENST00000578773 MAN2B1O00754 1011 aa12.49□□□□□ -0.41
GGA3-206ENST00000578773 MAGEB2O15479 319 aa12.49□□□□□ -0.41
GGA3-206ENST00000578773 RPP40O75818 363 aaKnown RBP12.49□□□□□ -0.41
GGA3-206ENST00000578773 SCNN1GP51170 649 aa12.49□□□□□ -0.41
GGA3-206ENST00000578773 DSC1Q08554 894 aa12.49□□□□□ -0.41
GGA3-206ENST00000578773 CEP55Q53EZ4 464 aa12.49□□□□□ -0.41
GGA3-206ENST00000578773 TYW1BQ6NUM6 668 aa12.49□□□□□ -0.41
GGA3-206ENST00000578773 VITQ6UXI7 678 aa12.49□□□□□ -0.41
GGA3-206ENST00000578773 MRPL10Q7Z7H8 261 aaKnown RBP12.49□□□□□ -0.41
GGA3-206ENST00000578773 MAP4K3Q8IVH8 894 aa12.49□□□□□ -0.41
GGA3-206ENST00000578773 SRBD1Q8N5C6 995 aaKnown RBP12.49□□□□□ -0.41
GGA3-206ENST00000578773 SMG8Q8ND04 991 aaKnown RBP12.49□□□□□ -0.41
GGA3-206ENST00000578773 ELSPBP1Q96BH3 223 aa12.49□□□□□ -0.41
GGA3-206ENST00000578773 RRP36Q96EU6 259 aaKnown RBP12.49□□□□□ -0.41
GGA3-206ENST00000578773 PAAF1Q9BRP4 392 aa12.49□□□□□ -0.41
GGA3-206ENST00000578773 SPZ1Q9BXG8 430 aa12.49□□□□□ -0.41
GGA3-206ENST00000578773 KRT23Q9C075 422 aa12.49□□□□□ -0.41
GGA3-206ENST00000578773 ANKFY1Q9P2R3 1169 aa12.49□□□□□ -0.41
GGA3-206ENST00000578773 STK39Q9UEW8 545 aa12.49□□□□□ -0.41
GGA3-206ENST00000578773 CARNS1A5YM72 827 aa12.48□□□□□ -0.41
GGA3-206ENST00000578773 PATE3B3GLJ2 98 aa12.48□□□□□ -0.41
GGA3-206ENST00000578773 FAM86B1E9PN63 330 aa12.48□□□□□ -0.41
GGA3-206ENST00000578773 CDX4O14627 284 aaPredicted RBP12.48□□□□□ -0.41
GGA3-206ENST00000578773 ADAMTS3O15072 1205 aa12.48□□□□□ -0.41
GGA3-206ENST00000578773 HNRNPA1P09651 372 aaKnown RBP eCLIP12.48□□□□□ -0.41
GGA3-206ENST00000578773 FAM86B2P0C5J1 330 aa12.48□□□□□ -0.41
GGA3-206ENST00000578773 GDI1P31150 447 aa12.48□□□□□ -0.41
GGA3-206ENST00000578773 MLH1P40692 756 aa12.48□□□□□ -0.41
GGA3-206ENST00000578773 FAM78AQ5JUQ0 283 aa12.48□□□□□ -0.41
GGA3-206ENST00000578773 CACNA2D4Q7Z3S7 1137 aa12.48□□□□□ -0.41
GGA3-206ENST00000578773 RAB11FIP4Q86YS3 637 aa12.48□□□□□ -0.41
GGA3-206ENST00000578773 TTC8Q8TAM2 541 aa12.48□□□□□ -0.41
GGA3-206ENST00000578773 HASPINQ8TF76 798 aa12.48□□□□□ -0.41
GGA3-206ENST00000578773 LRIG1Q96JA1 1093 aa12.48□□□□□ -0.41
GGA3-206ENST00000578773 LOXL4Q96JB6 756 aa12.48□□□□□ -0.41
GGA3-206ENST00000578773 GAD1Q99259 594 aa12.48□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 53.1 ms