RNA–Protein interactions for RNA: ENST00000578557.1

PPP4R1-210, Transcript of protein phosphatase 4 regulatory subunit 1, humanhuman

TSL 4

Gene PPP4R1, Length 571 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R1-210ENST00000578557 FAM117BQ6P1L5 589 aa9.43□□□□□ -0.9
PPP4R1-210ENST00000578557 PDXDC1Q6P996 788 aa9.43□□□□□ -0.9
PPP4R1-210ENST00000578557 ELMSAN1Q6PJG2 1045 aa9.43□□□□□ -0.9
PPP4R1-210ENST00000578557 Q7L0L9 218 aa9.43□□□□□ -0.9
PPP4R1-210ENST00000578557 KSR1Q8IVT5 923 aa9.43□□□□□ -0.9
PPP4R1-210ENST00000578557 ASAP3Q8TDY4 903 aa9.43□□□□□ -0.9
PPP4R1-210ENST00000578557 RNF166Q96A37 237 aaPredicted RBP9.43□□□□□ -0.9
PPP4R1-210ENST00000578557 PNMA5Q96PV4 448 aa9.43□□□□□ -0.9
PPP4R1-210ENST00000578557 PLEKHA5Q9HAU0 1116 aa9.43□□□□□ -0.9
PPP4R1-210ENST00000578557 TYW1Q9NV66 732 aaKnown RBP9.43□□□□□ -0.9
PPP4R1-210ENST00000578557 SLC38A7Q9NVC3 462 aa9.43□□□□□ -0.9
PPP4R1-210ENST00000578557 PLAGL2Q9UPG8 496 aa9.43□□□□□ -0.9
PPP4R1-210ENST00000578557 ADGRG1Q9Y653 693 aa9.43□□□□□ -0.9
PPP4R1-210ENST00000578557 RANBP2P49792 3224 aaKnown RBP9.43□□□□□ -0.9
PPP4R1-210ENST00000578557 CEP290O15078 2479 aa9.42□□□□□ -0.9
PPP4R1-210ENST00000578557 PVALEFA0A1B0GWK0 134 aa9.42□□□□□ -0.9
PPP4R1-210ENST00000578557 XPOTO43592 962 aaKnown RBP9.42□□□□□ -0.9
PPP4R1-210ENST00000578557 TRAK2O60296 914 aa9.42□□□□□ -0.9
PPP4R1-210ENST00000578557 FAM13AO94988 1023 aa9.42□□□□□ -0.9
PPP4R1-210ENST00000578557 KIF20AO95235 890 aa9.42□□□□□ -0.9
PPP4R1-210ENST00000578557 SSBP05455 408 aaKnown RBP eCLIP9.42□□□□□ -0.9
PPP4R1-210ENST00000578557 MYOGP15173 224 aa9.42□□□□□ -0.9
PPP4R1-210ENST00000578557 ARF4P18085 180 aaPredicted RBP9.42□□□□□ -0.9
PPP4R1-210ENST00000578557 PLCG1P19174 1290 aa9.42□□□□□ -0.9
PPP4R1-210ENST00000578557 CMA1P23946 247 aa9.42□□□□□ -0.9
PPP4R1-210ENST00000578557 MARCKSP29966 332 aaPredicted RBP9.42□□□□□ -0.9
PPP4R1-210ENST00000578557 CDC25AP30304 524 aa9.42□□□□□ -0.9
PPP4R1-210ENST00000578557 STAT6P42226 847 aa9.42□□□□□ -0.9
PPP4R1-210ENST00000578557 ME1P48163 572 aa9.42□□□□□ -0.9
PPP4R1-210ENST00000578557 PEX3P56589 373 aa9.42□□□□□ -0.9
PPP4R1-210ENST00000578557 CREMQ03060 361 aa9.42□□□□□ -0.9
PPP4R1-210ENST00000578557 ELAVL2Q12926 359 aaKnown RBP9.42□□□□□ -0.9
PPP4R1-210ENST00000578557 ZRSR1Q15695 479 aaKnown RBP9.42□□□□□ -0.9
PPP4R1-210ENST00000578557 ATF7IP2Q5U623 682 aa9.42□□□□□ -0.9
PPP4R1-210ENST00000578557 KCNT2Q6UVM3 1135 aa9.42□□□□□ -0.9
PPP4R1-210ENST00000578557 CCDC65Q8IXS2 484 aa9.42□□□□□ -0.9
PPP4R1-210ENST00000578557 THNSL1Q8IYQ7 743 aa9.42□□□□□ -0.9
PPP4R1-210ENST00000578557 MYCT1Q8N699 235 aa9.42□□□□□ -0.9
PPP4R1-210ENST00000578557 MYLIPQ8WY64 445 aa9.42□□□□□ -0.9
PPP4R1-210ENST00000578557 MRPS27Q92552 414 aaKnown RBP9.42□□□□□ -0.9
PPP4R1-210ENST00000578557 FAM161BQ96MY7 647 aa9.42□□□□□ -0.9
PPP4R1-210ENST00000578557 UROC1Q96N76 676 aa9.42□□□□□ -0.9
PPP4R1-210ENST00000578557 CCDC94Q9BW85 323 aaPredicted RBP9.42□□□□□ -0.9
PPP4R1-210ENST00000578557 COLEC11Q9BWP8 271 aa9.42□□□□□ -0.9
PPP4R1-210ENST00000578557 OSBPL7Q9BZF2 842 aa9.42□□□□□ -0.9
PPP4R1-210ENST00000578557 CCDC113Q9H0I3 377 aa9.42□□□□□ -0.9
PPP4R1-210ENST00000578557 NSUN3Q9H649 340 aaKnown RBP9.42□□□□□ -0.9
PPP4R1-210ENST00000578557 TMEM206Q9H813 350 aa9.42□□□□□ -0.9
PPP4R1-210ENST00000578557 MINDY3Q9H8M7 445 aa9.42□□□□□ -0.9
PPP4R1-210ENST00000578557 OLFML3Q9NRN5 406 aa9.42□□□□□ -0.9
PPP4R1-210ENST00000578557 CGNQ9P2M7 1197 aaKnown RBP9.42□□□□□ -0.9
PPP4R1-210ENST00000578557 IRAK3Q9Y616 596 aa9.42□□□□□ -0.9
PPP4R1-210ENST00000578557 ALPK3Q96L96 1907 aa9.42□□□□□ -0.9
PPP4R1-210ENST00000578557 A0A1W2PQ27 194 aa9.41□□□□□ -0.9
PPP4R1-210ENST00000578557 A0A1W2PQ64 194 aa9.41□□□□□ -0.9
PPP4R1-210ENST00000578557 A0A1W2PQD8 194 aa9.41□□□□□ -0.9
PPP4R1-210ENST00000578557 LCHNA4D1U4 455 aa9.41□□□□□ -0.9
PPP4R1-210ENST00000578557 SMAPO00193 183 aa9.41□□□□□ -0.9
PPP4R1-210ENST00000578557 CLDN3O15551 220 aa9.41□□□□□ -0.9
PPP4R1-210ENST00000578557 TRAPPC3O43617 180 aa9.41□□□□□ -0.9
PPP4R1-210ENST00000578557 LDHAP00338 332 aaKnown RBP9.41□□□□□ -0.9
PPP4R1-210ENST00000578557 PIGRP01833 764 aa9.41□□□□□ -0.9
PPP4R1-210ENST00000578557 THP07101 528 aa9.41□□□□□ -0.9
PPP4R1-210ENST00000578557 NCKAP1LP55160 1127 aa9.41□□□□□ -0.9
PPP4R1-210ENST00000578557 MRPS5P82675 430 aaKnown RBP9.41□□□□□ -0.9
PPP4R1-210ENST00000578557 GTF2BQ00403 316 aa9.41□□□□□ -0.9
PPP4R1-210ENST00000578557 PSMD2Q13200 908 aa9.41□□□□□ -0.9
PPP4R1-210ENST00000578557 KARSQ15046 597 aaKnown RBP9.41□□□□□ -0.9
PPP4R1-210ENST00000578557 ARSHQ5FYA8 562 aa9.41□□□□□ -0.9
PPP4R1-210ENST00000578557 RTL10Q7L3V2 364 aa9.41□□□□□ -0.9
PPP4R1-210ENST00000578557 MAEAQ7L5Y9 396 aa9.41□□□□□ -0.9
PPP4R1-210ENST00000578557 HAUS6Q7Z4H7 955 aa9.41□□□□□ -0.9
PPP4R1-210ENST00000578557 PPFIBP1Q86W92 1011 aa9.41□□□□□ -0.9
PPP4R1-210ENST00000578557 GPBP1Q86WP2 473 aa9.41□□□□□ -0.9
PPP4R1-210ENST00000578557 FAM178BQ8IXR5 827 aa9.41□□□□□ -0.9
PPP4R1-210ENST00000578557 CEP57L1Q8IYX8 460 aa9.41□□□□□ -0.9
PPP4R1-210ENST00000578557 COLGALT1Q8NBJ5 622 aa9.41□□□□□ -0.9
PPP4R1-210ENST00000578557 TMEM161BQ8NDZ6 487 aa9.41□□□□□ -0.9
PPP4R1-210ENST00000578557 SPPL3Q8TCT6 385 aa9.41□□□□□ -0.9
PPP4R1-210ENST00000578557 HLA-CQ95604 372 aa9.41□□□□□ -0.9
PPP4R1-210ENST00000578557 CCDC47Q96A33 483 aaKnown RBP9.41□□□□□ -0.9
PPP4R1-210ENST00000578557 TMEM169Q96HH4 297 aa9.41□□□□□ -0.9
PPP4R1-210ENST00000578557 EPSTI1Q96J88 318 aa9.41□□□□□ -0.9
PPP4R1-210ENST00000578557 ZFRQ96KR1 1074 aaKnown RBP9.41□□□□□ -0.9
PPP4R1-210ENST00000578557 SPATA32Q96LK8 384 aa9.41□□□□□ -0.9
PPP4R1-210ENST00000578557 RPS6KC1Q96S38 1066 aa9.41□□□□□ -0.9
PPP4R1-210ENST00000578557 PPP1R16BQ96T49 567 aa9.41□□□□□ -0.9
PPP4R1-210ENST00000578557 ACO2Q99798 780 aaKnown RBP9.41□□□□□ -0.9
PPP4R1-210ENST00000578557 C17orf80Q9BSJ5 609 aa9.41□□□□□ -0.9
PPP4R1-210ENST00000578557 TCHPQ9BT92 498 aa9.41□□□□□ -0.9
PPP4R1-210ENST00000578557 OXCT2Q9BYC2 517 aaPredicted RBP9.41□□□□□ -0.9
PPP4R1-210ENST00000578557 CWH43Q9H720 699 aa9.41□□□□□ -0.9
PPP4R1-210ENST00000578557 KBTBD4Q9NVX7 518 aa9.41□□□□□ -0.9
PPP4R1-210ENST00000578557 TFIP11Q9UBB9 837 aaKnown RBP9.41□□□□□ -0.9
PPP4R1-210ENST00000578557 FAN1Q9Y2M0 1017 aa9.41□□□□□ -0.9
PPP4R1-210ENST00000578557 IPPQ9Y573 584 aa9.41□□□□□ -0.9
PPP4R1-210ENST00000578557 MRPL42Q9Y6G3 142 aaKnown RBP9.41□□□□□ -0.9
PPP4R1-210ENST00000578557 ARHGEF37A1IGU5 675 aa9.4□□□□□ -0.9
PPP4R1-210ENST00000578557 GOLGA6L4A6NEF3 574 aa9.4□□□□□ -0.9
PPP4R1-210ENST00000578557 ARL5CA6NH57 179 aa9.4□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms