RNA–Protein interactions for RNA: ENST00000578063.5

PRKCA-203, Transcript of protein kinase C alpha, humanhuman

TSL 1 (best)

Gene PRKCA, Length 1,733 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCA-203ENST00000578063 TSR1Q2NL82 804 aaKnown RBP20.18■□□□□ 0.82
PRKCA-203ENST00000578063 NBPF20Q3BBV1 942 aa20.18■□□□□ 0.82
PRKCA-203ENST00000578063 MPZL3Q6UWV2 235 aa20.18■□□□□ 0.82
PRKCA-203ENST00000578063 SESTD1Q86VW0 696 aa20.18■□□□□ 0.82
PRKCA-203ENST00000578063 TMEM139Q8IV31 216 aa20.18■□□□□ 0.82
PRKCA-203ENST00000578063 NME8Q8N427 588 aa20.18■□□□□ 0.82
PRKCA-203ENST00000578063 OR8K1Q8NGG5 319 aa20.18■□□□□ 0.82
PRKCA-203ENST00000578063 PARD3BQ8TEW8 1205 aa20.18■□□□□ 0.82
PRKCA-203ENST00000578063 PPP1R13LQ8WUF5 828 aa20.18■□□□□ 0.82
PRKCA-203ENST00000578063 DNAJC7Q99615 494 aa20.18■□□□□ 0.82
PRKCA-203ENST00000578063 TCHPQ9BT92 498 aa20.18■□□□□ 0.82
PRKCA-203ENST00000578063 GCOM2Q9BZD3 368 aaPredicted RBP20.18■□□□□ 0.82
PRKCA-203ENST00000578063 ADAMTS10Q9H324 1103 aa20.18■□□□□ 0.82
PRKCA-203ENST00000578063 CEP72Q9P209 647 aa20.18■□□□□ 0.82
PRKCA-203ENST00000578063 TTLL13PA6NNM8 815 aa20.17■□□□□ 0.82
PRKCA-203ENST00000578063 RNF225M0QZC1 329 aaPredicted RBP20.17■□□□□ 0.82
PRKCA-203ENST00000578063 PMM2O15305 246 aa20.17■□□□□ 0.82
PRKCA-203ENST00000578063 ARHGAP6O43182 974 aa20.17■□□□□ 0.82
PRKCA-203ENST00000578063 CABYRO75952 493 aa20.17■□□□□ 0.82
PRKCA-203ENST00000578063 MYCNP04198 464 aaPredicted RBP20.17■□□□□ 0.82
PRKCA-203ENST00000578063 FECHP22830 423 aa20.17■□□□□ 0.82
PRKCA-203ENST00000578063 GTF2H1P32780 548 aa20.17■□□□□ 0.82
PRKCA-203ENST00000578063 DLG4P78352 724 aa20.17■□□□□ 0.82
PRKCA-203ENST00000578063 AMHR2Q16671 573 aa20.17■□□□□ 0.82
PRKCA-203ENST00000578063 KIAA1524Q8TCG1 905 aa20.17■□□□□ 0.82
PRKCA-203ENST00000578063 PLEKHO2Q8TD55 490 aa20.17■□□□□ 0.82
PRKCA-203ENST00000578063 PTPRHQ9HD43 1115 aa20.17■□□□□ 0.82
PRKCA-203ENST00000578063 WBP1LQ9NX94 342 aa20.17■□□□□ 0.82
PRKCA-203ENST00000578063 ABLIM1O14639 778 aa20.16■□□□□ 0.82
PRKCA-203ENST00000578063 EPHB6O15197 1021 aa20.16■□□□□ 0.82
PRKCA-203ENST00000578063 GPR32O75388 356 aa20.16■□□□□ 0.82
PRKCA-203ENST00000578063 IQCF3P0C7M6 154 aa20.16■□□□□ 0.82
PRKCA-203ENST00000578063 PON1P27169 355 aa20.16■□□□□ 0.82
PRKCA-203ENST00000578063 PSMD6Q15008 389 aa20.16■□□□□ 0.82
PRKCA-203ENST00000578063 KIZQ2M2Z5 673 aa20.16■□□□□ 0.82
PRKCA-203ENST00000578063 ZNF568Q3ZCX4 644 aa20.16■□□□□ 0.82
PRKCA-203ENST00000578063 CBWD6Q4V339 395 aa20.16■□□□□ 0.82
PRKCA-203ENST00000578063 CBWD3Q5JTY5 395 aa20.16■□□□□ 0.82
PRKCA-203ENST00000578063 CBWD5Q5RIA9 395 aa20.16■□□□□ 0.82
PRKCA-203ENST00000578063 C1orf220Q5T0J3 134 aa20.16■□□□□ 0.82
PRKCA-203ENST00000578063 DNAJB3Q8WWF6 145 aa20.16■□□□□ 0.82
PRKCA-203ENST00000578063 CCDC127Q96BQ5 260 aa20.16■□□□□ 0.82
PRKCA-203ENST00000578063 AGPAT5Q9NUQ2 364 aa20.16■□□□□ 0.82
PRKCA-203ENST00000578063 OGTO15294 1046 aa20.16■□□□□ 0.82
PRKCA-203ENST00000578063 B4GALT5O43286 388 aa20.16■□□□□ 0.82
PRKCA-203ENST00000578063 ERLIN2O94905 339 aa20.16■□□□□ 0.82
PRKCA-203ENST00000578063 RPLP2P05387 115 aaKnown RBP20.16■□□□□ 0.82
PRKCA-203ENST00000578063 MXI1P50539 228 aa20.16■□□□□ 0.82
PRKCA-203ENST00000578063 ZNF200P98182 395 aaPredicted RBP20.16■□□□□ 0.82
PRKCA-203ENST00000578063 PPP3CAQ08209 521 aa20.16■□□□□ 0.82
PRKCA-203ENST00000578063 CACNA2D4Q7Z3S7 1137 aa20.16■□□□□ 0.82
PRKCA-203ENST00000578063 NUCKS1Q9H1E3 243 aaKnown RBP20.16■□□□□ 0.82
PRKCA-203ENST00000578063 RBAKQ9NYW8 714 aaPredicted RBP20.16■□□□□ 0.82
PRKCA-203ENST00000578063 FBXL5Q9UKA1 691 aa20.16■□□□□ 0.82
PRKCA-203ENST00000578063 DAAM1Q9Y4D1 1078 aa20.16■□□□□ 0.82
PRKCA-203ENST00000578063 PCNTO95613 3336 aa20.15■□□□□ 0.82
PRKCA-203ENST00000578063 LRRIQ3A6PVS8 624 aaPredicted RBP20.15■□□□□ 0.82
PRKCA-203ENST00000578063 NOL4O94818 638 aa20.15■□□□□ 0.82
PRKCA-203ENST00000578063 HARSP12081 509 aaKnown RBP20.15■□□□□ 0.82
PRKCA-203ENST00000578063 ACOT2P49753 483 aa20.15■□□□□ 0.82
PRKCA-203ENST00000578063 CRELD2Q6UXH1 353 aaPredicted RBP20.15■□□□□ 0.82
PRKCA-203ENST00000578063 ZBTB33Q86T24 672 aa20.15■□□□□ 0.82
PRKCA-203ENST00000578063 TSEN34Q9BSV6 310 aaKnown RBP20.15■□□□□ 0.82
PRKCA-203ENST00000578063 GANQ9H2C0 597 aa20.15■□□□□ 0.82
PRKCA-203ENST00000578063 TMEM8AQ9HCN3 771 aa20.15■□□□□ 0.82
PRKCA-203ENST00000578063 ZNHIT6Q9NWK9 470 aaKnown RBP20.15■□□□□ 0.82
PRKCA-203ENST00000578063 MOXD2PA6NHM9 499 aa20.14■□□□□ 0.81
PRKCA-203ENST00000578063 FAM189A1O60320 539 aa20.14■□□□□ 0.81
PRKCA-203ENST00000578063 TSPAN1O60635 241 aa20.14■□□□□ 0.81
PRKCA-203ENST00000578063 SLC9A1P19634 815 aa20.14■□□□□ 0.81
PRKCA-203ENST00000578063 GCLMP48507 274 aa20.14■□□□□ 0.81
PRKCA-203ENST00000578063 TMEM62Q0P6H9 643 aa20.14■□□□□ 0.81
PRKCA-203ENST00000578063 FAM47CQ5HY64 1035 aa20.14■□□□□ 0.81
PRKCA-203ENST00000578063 KLHDC7AQ5VTJ3 777 aa20.14■□□□□ 0.81
PRKCA-203ENST00000578063 TRIM65Q6PJ69 517 aa20.14■□□□□ 0.81
PRKCA-203ENST00000578063 TMTC1Q8IUR5 882 aa20.14■□□□□ 0.81
PRKCA-203ENST00000578063 BRSK2Q8IWQ3 736 aa20.14■□□□□ 0.81
PRKCA-203ENST00000578063 FNBP1Q96RU3 617 aa20.14■□□□□ 0.81
PRKCA-203ENST00000578063 ZNF500O60304 480 aaPredicted RBP20.13■□□□□ 0.81
PRKCA-203ENST00000578063 DLATP10515 647 aaKnown RBP20.13■□□□□ 0.81
PRKCA-203ENST00000578063 MCF2P10911 925 aa20.13■□□□□ 0.81
PRKCA-203ENST00000578063 DARSP14868 501 aaKnown RBP20.13■□□□□ 0.81
PRKCA-203ENST00000578063 ACLYP53396 1101 aa20.13■□□□□ 0.81
PRKCA-203ENST00000578063 CLDN10P78369 228 aa20.13■□□□□ 0.81
PRKCA-203ENST00000578063 EEF1DP3Q658K8 133 aa20.13■□□□□ 0.81
PRKCA-203ENST00000578063 LHX8Q68G74 356 aa20.13■□□□□ 0.81
PRKCA-203ENST00000578063 KRT39Q6A163 491 aa20.13■□□□□ 0.81
PRKCA-203ENST00000578063 GDF6Q6KF10 455 aaPredicted RBP20.13■□□□□ 0.81
PRKCA-203ENST00000578063 DPY19L2P1Q6NXN4 242 aa20.13■□□□□ 0.81
PRKCA-203ENST00000578063 CYP26C1Q6V0L0 522 aa20.13■□□□□ 0.81
PRKCA-203ENST00000578063 RSPH3Q86UC2 560 aa20.13■□□□□ 0.81
PRKCA-203ENST00000578063 BAP1Q92560 729 aa20.13■□□□□ 0.81
PRKCA-203ENST00000578063 OSMRQ99650 979 aa20.13■□□□□ 0.81
PRKCA-203ENST00000578063 TMEM117Q9H0C3 514 aa20.13■□□□□ 0.81
PRKCA-203ENST00000578063 CDT1Q9H211 546 aa20.13■□□□□ 0.81
PRKCA-203ENST00000578063 GINS2Q9Y248 185 aa20.13■□□□□ 0.81
PRKCA-203ENST00000578063 PTPN22Q9Y2R2 807 aa20.13■□□□□ 0.81
PRKCA-203ENST00000578063 CSDE1O75534 798 aaKnown RBP20.13■□□□□ 0.81
PRKCA-203ENST00000578063 UCHL3P15374 230 aa20.13■□□□□ 0.81
PRKCA-203ENST00000578063 ARF4P18085 180 aaPredicted RBP20.13■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms