RNA–Protein interactions for RNA: ENST00000576613.5

CTDNEP1-212, Transcript of CTD nuclear envelope phosphatase 1, humanhuman

TSL 3

Gene CTDNEP1, Length 606 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDNEP1-212ENST00000576613 XKR9Q5GH70 373 aa12.97□□□□□ -0.33
CTDNEP1-212ENST00000576613 PPP4R3AQ6IN85 833 aa12.97□□□□□ -0.33
CTDNEP1-212ENST00000576613 SPATA31D4Q6ZUB0 917 aa12.97□□□□□ -0.33
CTDNEP1-212ENST00000576613 CENPQQ7L2Z9 268 aaPredicted RBP12.97□□□□□ -0.33
CTDNEP1-212ENST00000576613 RIN2Q8WYP3 895 aaPredicted RBP12.97□□□□□ -0.33
CTDNEP1-212ENST00000576613 SHDQ96IW2 340 aa12.97□□□□□ -0.33
CTDNEP1-212ENST00000576613 MTRQ99707 1265 aa12.97□□□□□ -0.33
CTDNEP1-212ENST00000576613 NAP1L4Q99733 375 aaKnown RBP12.97□□□□□ -0.33
CTDNEP1-212ENST00000576613 EIF2AQ9BY44 585 aaKnown RBP12.97□□□□□ -0.33
CTDNEP1-212ENST00000576613 PRKD2Q9BZL6 878 aa12.97□□□□□ -0.33
CTDNEP1-212ENST00000576613 NT5C3AQ9H0P0 336 aa12.97□□□□□ -0.33
CTDNEP1-212ENST00000576613 CSRNP2Q9H175 543 aa12.97□□□□□ -0.33
CTDNEP1-212ENST00000576613 ZSWIM4Q9H7M6 989 aa12.97□□□□□ -0.33
CTDNEP1-212ENST00000576613 SLC2A4RGQ9NR83 387 aa12.97□□□□□ -0.33
CTDNEP1-212ENST00000576613 FNIP2Q9P278 1114 aa12.97□□□□□ -0.33
CTDNEP1-212ENST00000576613 WRAP73Q9P2S5 460 aaPredicted RBP12.97□□□□□ -0.33
CTDNEP1-212ENST00000576613 GIT1Q9Y2X7 761 aa12.97□□□□□ -0.33
CTDNEP1-212ENST00000576613 ANHXE9PGG2 379 aa12.96□□□□□ -0.33
CTDNEP1-212ENST00000576613 INO80B-WBP1J3KQ70 363 aa12.96□□□□□ -0.33
CTDNEP1-212ENST00000576613 TBX3O15119 743 aa12.96□□□□□ -0.33
CTDNEP1-212ENST00000576613 DCNP07585 359 aaKnown RBP12.96□□□□□ -0.33
CTDNEP1-212ENST00000576613 PTENP60484 403 aa12.96□□□□□ -0.33
CTDNEP1-212ENST00000576613 HTR4Q13639 388 aa12.96□□□□□ -0.33
CTDNEP1-212ENST00000576613 EPHA7Q15375 998 aa12.96□□□□□ -0.33
CTDNEP1-212ENST00000576613 NPY5RQ15761 445 aa12.96□□□□□ -0.33
CTDNEP1-212ENST00000576613 FUT10Q6P4F1 479 aa12.96□□□□□ -0.33
CTDNEP1-212ENST00000576613 DCLRE1AQ6PJP8 1040 aa12.96□□□□□ -0.33
CTDNEP1-212ENST00000576613 RUFY3Q7L099 469 aa12.96□□□□□ -0.33
CTDNEP1-212ENST00000576613 DGLUCYQ7Z3D6 616 aa12.96□□□□□ -0.33
CTDNEP1-212ENST00000576613 NEK8Q86SG6 692 aa12.96□□□□□ -0.33
CTDNEP1-212ENST00000576613 SKAP1Q86WV1 359 aa12.96□□□□□ -0.33
CTDNEP1-212ENST00000576613 C1orf210Q8IVY1 113 aa12.96□□□□□ -0.33
CTDNEP1-212ENST00000576613 KIAA2013Q8IYS2 634 aa12.96□□□□□ -0.33
CTDNEP1-212ENST00000576613 PJA1Q8NG27 643 aa12.96□□□□□ -0.33
CTDNEP1-212ENST00000576613 RUBCNQ92622 972 aa12.96□□□□□ -0.33
CTDNEP1-212ENST00000576613 CPB2Q96IY4 423 aa12.96□□□□□ -0.33
CTDNEP1-212ENST00000576613 B3GALT6Q96L58 329 aa12.96□□□□□ -0.33
CTDNEP1-212ENST00000576613 APOL6Q9BWW8 343 aa12.96□□□□□ -0.33
CTDNEP1-212ENST00000576613 RNF39Q9H2S5 420 aa12.96□□□□□ -0.33
CTDNEP1-212ENST00000576613 ADAM28Q9UKQ2 775 aa12.96□□□□□ -0.33
CTDNEP1-212ENST00000576613 HES2Q9Y543 173 aa12.96□□□□□ -0.33
CTDNEP1-212ENST00000576613 NUMBLQ9Y6R0 609 aa12.96□□□□□ -0.33
CTDNEP1-212ENST00000576613 ZMYM2Q9UBW7 1377 aa12.95□□□□□ -0.34
CTDNEP1-212ENST00000576613 DNAH14Q0VDD8 3507 aa12.95□□□□□ -0.34
CTDNEP1-212ENST00000576613 SF3B1O75533 1304 aaKnown RBP eCLIP12.95□□□□□ -0.34
CTDNEP1-212ENST00000576613 F8W810 466 aa12.95□□□□□ -0.34
CTDNEP1-212ENST00000576613 CCNT1O60563 726 aaKnown RBP12.95□□□□□ -0.34
CTDNEP1-212ENST00000576613 ZMYND10O75800 440 aa12.95□□□□□ -0.34
CTDNEP1-212ENST00000576613 REC8O95072 547 aa12.95□□□□□ -0.34
CTDNEP1-212ENST00000576613 SP9P0CG40 484 aa12.95□□□□□ -0.34
CTDNEP1-212ENST00000576613 XBP1P17861 261 aa12.95□□□□□ -0.34
CTDNEP1-212ENST00000576613 FSHRP23945 695 aa12.95□□□□□ -0.34
CTDNEP1-212ENST00000576613 POU5F1BQ06416 359 aa12.95□□□□□ -0.34
CTDNEP1-212ENST00000576613 GRIK3Q13003 919 aa12.95□□□□□ -0.34
CTDNEP1-212ENST00000576613 NCAPH2Q6IBW4 605 aa12.95□□□□□ -0.34
CTDNEP1-212ENST00000576613 LILRA6Q6PI73 481 aa12.95□□□□□ -0.34
CTDNEP1-212ENST00000576613 GLYCTKQ8IVS8 523 aa12.95□□□□□ -0.34
CTDNEP1-212ENST00000576613 SLFN12Q8IYM2 578 aa12.95□□□□□ -0.34
CTDNEP1-212ENST00000576613 RMDN1Q96DB5 314 aa12.95□□□□□ -0.34
CTDNEP1-212ENST00000576613 ZNF274Q96GC6 653 aaPredicted RBP12.95□□□□□ -0.34
CTDNEP1-212ENST00000576613 CCDC43Q96MW1 224 aaKnown RBP12.95□□□□□ -0.34
CTDNEP1-212ENST00000576613 GPR62Q9BZJ7 368 aa12.95□□□□□ -0.34
CTDNEP1-212ENST00000576613 NXF3Q9H4D5 531 aaKnown RBP12.95□□□□□ -0.34
CTDNEP1-212ENST00000576613 DLGAP2Q9P1A6 1054 aa12.95□□□□□ -0.34
CTDNEP1-212ENST00000576613 MIA3Q5JRA6 1907 aa12.95□□□□□ -0.34
CTDNEP1-212ENST00000576613 FANCMQ8IYD8 2048 aa12.95□□□□□ -0.34
CTDNEP1-212ENST00000576613 MYH15Q9Y2K3 1946 aa12.94□□□□□ -0.34
CTDNEP1-212ENST00000576613 TADA2AO75478 443 aa12.94□□□□□ -0.34
CTDNEP1-212ENST00000576613 CDKL5O76039 1030 aa12.94□□□□□ -0.34
CTDNEP1-212ENST00000576613 BAG4O95429 457 aaKnown RBP12.94□□□□□ -0.34
CTDNEP1-212ENST00000576613 CYP4A11Q02928 519 aa12.94□□□□□ -0.34
CTDNEP1-212ENST00000576613 MBTD1Q05BQ5 628 aa12.94□□□□□ -0.34
CTDNEP1-212ENST00000576613 TOB2Q14106 344 aaPredicted RBP12.94□□□□□ -0.34
CTDNEP1-212ENST00000576613 PUM1Q14671 1186 aaKnown RBP eCLIP12.94□□□□□ -0.34
CTDNEP1-212ENST00000576613 LIN9Q5TKA1 542 aa12.94□□□□□ -0.34
CTDNEP1-212ENST00000576613 SLC27A1Q6PCB7 646 aa12.94□□□□□ -0.34
CTDNEP1-212ENST00000576613 MTSS1LQ765P7 747 aa12.94□□□□□ -0.34
CTDNEP1-212ENST00000576613 IFNLR1Q8IU57 520 aaPredicted RBP12.94□□□□□ -0.34
CTDNEP1-212ENST00000576613 DYDC2Q96IM9 177 aa12.94□□□□□ -0.34
CTDNEP1-212ENST00000576613 AIFM3Q96NN9 605 aa12.94□□□□□ -0.34
CTDNEP1-212ENST00000576613 NFKBIZQ9BYH8 718 aa12.94□□□□□ -0.34
CTDNEP1-212ENST00000576613 MIOSQ9NXC5 875 aa12.94□□□□□ -0.34
CTDNEP1-212ENST00000576613 RGL1Q9NZL6 768 aa12.94□□□□□ -0.34
CTDNEP1-212ENST00000576613 KCNJ14Q9UNX9 436 aa12.94□□□□□ -0.34
CTDNEP1-212ENST00000576613 CYP46A1Q9Y6A2 500 aa12.94□□□□□ -0.34
CTDNEP1-212ENST00000576613 KINO60870 393 aaKnown RBP12.93□□□□□ -0.34
CTDNEP1-212ENST00000576613 DGAT1O75907 488 aa12.93□□□□□ -0.34
CTDNEP1-212ENST00000576613 HNRNPA1P09651 372 aaKnown RBP eCLIP12.93□□□□□ -0.34
CTDNEP1-212ENST00000576613 ARF4P18085 180 aaPredicted RBP12.93□□□□□ -0.34
CTDNEP1-212ENST00000576613 RPL17P18621 184 aaKnown RBP12.93□□□□□ -0.34
CTDNEP1-212ENST00000576613 AKAP5P24588 427 aa12.93□□□□□ -0.34
CTDNEP1-212ENST00000576613 STARD6P59095 220 aa12.93□□□□□ -0.34
CTDNEP1-212ENST00000576613 CAPSQ13938 189 aa12.93□□□□□ -0.34
CTDNEP1-212ENST00000576613 CTTNQ14247 550 aaKnown RBP12.93□□□□□ -0.34
CTDNEP1-212ENST00000576613 HSP90AA2PQ14568 343 aaPredicted RBP12.93□□□□□ -0.34
CTDNEP1-212ENST00000576613 GRASPQ7Z6J2 395 aaPredicted RBP12.93□□□□□ -0.34
CTDNEP1-212ENST00000576613 POTEDQ86YR6 584 aa12.93□□□□□ -0.34
CTDNEP1-212ENST00000576613 TPH2Q8IWU9 490 aa12.93□□□□□ -0.34
CTDNEP1-212ENST00000576613 HAS1Q92839 578 aa12.93□□□□□ -0.34
CTDNEP1-212ENST00000576613 BORCS6Q96GS4 357 aa12.93□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms