RNA–Protein interactions for RNA: ENST00000575830.2

CDC27-218, Transcript of cell division cycle 27, humanhuman

TSL 5

Gene CDC27, Length 397 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC27-218ENST00000575830 CEP72Q9P209 647 aa4.47□□□□□ -1.69
CDC27-218ENST00000575830 TUBD1Q9UJT1 453 aa4.47□□□□□ -1.69
CDC27-218ENST00000575830 PEX11BO96011 259 aa4.46□□□□□ -1.7
CDC27-218ENST00000575830 HIBADHP31937 336 aaKnown RBP4.46□□□□□ -1.7
CDC27-218ENST00000575830 SREBF1P36956 1147 aa4.46□□□□□ -1.7
CDC27-218ENST00000575830 RRP1BQ14684 758 aaKnown RBP4.46□□□□□ -1.7
CDC27-218ENST00000575830 ELAVL1Q15717 326 aaKnown RBP4.46□□□□□ -1.7
CDC27-218ENST00000575830 BRDTQ58F21 947 aaPredicted RBP4.46□□□□□ -1.7
CDC27-218ENST00000575830 FAM47AQ5JRC9 791 aa4.46□□□□□ -1.7
CDC27-218ENST00000575830 Q6ZRM9 215 aa4.46□□□□□ -1.7
CDC27-218ENST00000575830 ZNF572Q7Z3I7 529 aaPredicted RBP4.46□□□□□ -1.7
CDC27-218ENST00000575830 TRMT2AQ8IZ69 625 aaKnown RBP4.46□□□□□ -1.7
CDC27-218ENST00000575830 OR2I1PQ8NGU4 316 aa4.46□□□□□ -1.7
CDC27-218ENST00000575830 DDX55Q8NHQ9 600 aaKnown RBP eCLIP4.46□□□□□ -1.7
CDC27-218ENST00000575830 CACTINQ8WUQ7 758 aaKnown RBP4.46□□□□□ -1.7
CDC27-218ENST00000575830 ST8SIA2Q92186 375 aa4.46□□□□□ -1.7
CDC27-218ENST00000575830 EXTL1Q92935 676 aa4.46□□□□□ -1.7
CDC27-218ENST00000575830 GPR20Q99678 358 aa4.46□□□□□ -1.7
CDC27-218ENST00000575830 CPEB1Q9BZB8 566 aaKnown RBP4.46□□□□□ -1.7
CDC27-218ENST00000575830 GIT1Q9Y2X7 761 aa4.46□□□□□ -1.7
CDC27-218ENST00000575830 ZMYM3Q14202 1370 aa4.45□□□□□ -1.7
CDC27-218ENST00000575830 SHTN1A0MZ66 631 aa4.45□□□□□ -1.7
CDC27-218ENST00000575830 CAPN14A8MX76 684 aa4.45□□□□□ -1.7
CDC27-218ENST00000575830 PJA2O43164 708 aa4.45□□□□□ -1.7
CDC27-218ENST00000575830 MFAP3LO75121 409 aa4.45□□□□□ -1.7
CDC27-218ENST00000575830 OSMP13725 252 aa4.45□□□□□ -1.7
CDC27-218ENST00000575830 INSRRP14616 1297 aa4.45□□□□□ -1.7
CDC27-218ENST00000575830 ALOX15P16050 662 aaPredicted RBP4.45□□□□□ -1.7
CDC27-218ENST00000575830 C5AR1P21730 350 aa4.45□□□□□ -1.7
CDC27-218ENST00000575830 FLT3LGP49771 235 aa4.45□□□□□ -1.7
CDC27-218ENST00000575830 ATP8B2P98198 1209 aa4.45□□□□□ -1.7
CDC27-218ENST00000575830 EXOSC10Q01780 885 aaKnown RBP4.45□□□□□ -1.7
CDC27-218ENST00000575830 APBA1Q02410 837 aa4.45□□□□□ -1.7
CDC27-218ENST00000575830 HHEXQ03014 270 aa4.45□□□□□ -1.7
CDC27-218ENST00000575830 ITKQ08881 620 aa4.45□□□□□ -1.7
CDC27-218ENST00000575830 TOB2Q14106 344 aaPredicted RBP4.45□□□□□ -1.7
CDC27-218ENST00000575830 PCBP2Q15366 365 aaKnown RBP eCLIP4.45□□□□□ -1.7
CDC27-218ENST00000575830 BMT2Q1RMZ1 405 aa4.45□□□□□ -1.7
CDC27-218ENST00000575830 FAM214AQ32MH5 1076 aa4.45□□□□□ -1.7
CDC27-218ENST00000575830 MFSD14BQ5SR56 506 aa4.45□□□□□ -1.7
CDC27-218ENST00000575830 PRAMEF14Q5SWL7 426 aa4.45□□□□□ -1.7
CDC27-218ENST00000575830 METRNLQ641Q3 311 aa4.45□□□□□ -1.7
CDC27-218ENST00000575830 CRIP3Q6Q6R5 217 aa4.45□□□□□ -1.7
CDC27-218ENST00000575830 SPRED1Q7Z699 444 aa4.45□□□□□ -1.7
CDC27-218ENST00000575830 FAM83AQ86UY5 434 aa4.45□□□□□ -1.7
CDC27-218ENST00000575830 SGMS1Q86VZ5 419 aa4.45□□□□□ -1.7
CDC27-218ENST00000575830 OR5M3Q8NGP4 307 aa4.45□□□□□ -1.7
CDC27-218ENST00000575830 CEP95Q96GE4 821 aa4.45□□□□□ -1.7
CDC27-218ENST00000575830 MNTQ99583 582 aa4.45□□□□□ -1.7
CDC27-218ENST00000575830 TCF7L1Q9HCS4 588 aa4.45□□□□□ -1.7
CDC27-218ENST00000575830 HOMER2Q9NSB8 354 aa4.45□□□□□ -1.7
CDC27-218ENST00000575830 IPPQ9Y573 584 aa4.45□□□□□ -1.7
CDC27-218ENST00000575830 KLHL33A6NCF5 533 aa4.44□□□□□ -1.7
CDC27-218ENST00000575830 TBKBP1A7MCY6 615 aa4.44□□□□□ -1.7
CDC27-218ENST00000575830 B5MCH6 92 aa4.44□□□□□ -1.7
CDC27-218ENST00000575830 ADCY6O43306 1168 aa4.44□□□□□ -1.7
CDC27-218ENST00000575830 AKR1B10O60218 316 aa4.44□□□□□ -1.7
CDC27-218ENST00000575830 PRAMEF4O60810 478 aa4.44□□□□□ -1.7
CDC27-218ENST00000575830 IPO13O94829 963 aaKnown RBP4.44□□□□□ -1.7
CDC27-218ENST00000575830 ZRANB2O95218 330 aaKnown RBP eCLIP4.44□□□□□ -1.7
CDC27-218ENST00000575830 EDNRBP24530 442 aa4.44□□□□□ -1.7
CDC27-218ENST00000575830 MAN2A2P49641 1150 aa4.44□□□□□ -1.7
CDC27-218ENST00000575830 SP140Q13342 867 aa4.44□□□□□ -1.7
CDC27-218ENST00000575830 FOXE3Q13461 319 aa4.44□□□□□ -1.7
CDC27-218ENST00000575830 ODF1Q14990 250 aa4.44□□□□□ -1.7
CDC27-218ENST00000575830 VPS72Q15906 364 aa4.44□□□□□ -1.7
CDC27-218ENST00000575830 PGM2L1Q6PCE3 622 aa4.44□□□□□ -1.7
CDC27-218ENST00000575830 FAM180AQ6UWF9 173 aa4.44□□□□□ -1.7
CDC27-218ENST00000575830 ELOA2Q8IYF1 753 aaPredicted RBP4.44□□□□□ -1.7
CDC27-218ENST00000575830 Q8N1X5 172 aa4.44□□□□□ -1.7
CDC27-218ENST00000575830 SH3RF3Q8TEJ3 882 aaPredicted RBP4.44□□□□□ -1.7
CDC27-218ENST00000575830 CASKIN2Q8WXE0 1202 aa4.44□□□□□ -1.7
CDC27-218ENST00000575830 CYFIP2Q96F07 1278 aa4.44□□□□□ -1.7
CDC27-218ENST00000575830 ZNF747Q9BV97 191 aa4.44□□□□□ -1.7
CDC27-218ENST00000575830 DMRT3Q9NQL9 472 aa4.44□□□□□ -1.7
CDC27-218ENST00000575830 FAM171A2A8MVW0 826 aa4.43□□□□□ -1.7
CDC27-218ENST00000575830 NDUFS2O75306 463 aa4.43□□□□□ -1.7
CDC27-218ENST00000575830 GSPT1P15170 499 aaKnown RBP4.43□□□□□ -1.7
CDC27-218ENST00000575830 ECHS1P30084 290 aa4.43□□□□□ -1.7
CDC27-218ENST00000575830 SLC25A3Q00325 362 aa4.43□□□□□ -1.7
CDC27-218ENST00000575830 FAM50AQ14320 339 aaKnown RBP4.43□□□□□ -1.7
CDC27-218ENST00000575830 ABCB5Q2M3G0 1257 aa4.43□□□□□ -1.7
CDC27-218ENST00000575830 USP39Q53GS9 565 aaKnown RBP4.43□□□□□ -1.7
CDC27-218ENST00000575830 TMEM240Q5SV17 173 aa4.43□□□□□ -1.7
CDC27-218ENST00000575830 ANKS6Q68DC2 871 aa4.43□□□□□ -1.7
CDC27-218ENST00000575830 OTUD7BQ6GQQ9 843 aa4.43□□□□□ -1.7
CDC27-218ENST00000575830 PDZD4Q76G19 769 aaPredicted RBP4.43□□□□□ -1.7
CDC27-218ENST00000575830 PALM2Q8IXS6 379 aa4.43□□□□□ -1.7
CDC27-218ENST00000575830 AMOTL1Q8IY63 956 aa4.43□□□□□ -1.7
CDC27-218ENST00000575830 GSPT2Q8IYD1 628 aaKnown RBP4.43□□□□□ -1.7
CDC27-218ENST00000575830 ARL8AQ96BM9 186 aa4.43□□□□□ -1.7
CDC27-218ENST00000575830 COA7Q96BR5 231 aa4.43□□□□□ -1.7
CDC27-218ENST00000575830 TEKT5Q96M29 485 aa4.43□□□□□ -1.7
CDC27-218ENST00000575830 SLC2A13Q96QE2 648 aa4.43□□□□□ -1.7
CDC27-218ENST00000575830 CDC5LQ99459 802 aaKnown RBP4.43□□□□□ -1.7
CDC27-218ENST00000575830 NCDNQ9UBB6 729 aa4.43□□□□□ -1.7
CDC27-218ENST00000575830 DKK2Q9UBU2 259 aa4.43□□□□□ -1.7
CDC27-218ENST00000575830 CLCA2Q9UQC9 943 aa4.43□□□□□ -1.7
CDC27-218ENST00000575830 PNPLA7Q6ZV29 1317 aa4.43□□□□□ -1.7
CDC27-218ENST00000575830 CXorf49A8MYA2 514 aaPredicted RBP4.42□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms