RNA–Protein interactions for RNA: ENST00000575333.5

TOM1L1-220, Transcript of target of myb1 like 1 membrane trafficking protein, humanhuman

TSL 1 (best) BASIC

Gene TOM1L1, Length 1,849 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOM1L1-220ENST00000575333 FITM2Q8N6M3 262 aa8.49□□□□□ -1.05
TOM1L1-220ENST00000575333 SUPT20HQ8NEM7 779 aa8.49□□□□□ -1.05
TOM1L1-220ENST00000575333 GADD45GIP1Q8TAE8 222 aaPredicted RBP8.49□□□□□ -1.05
TOM1L1-220ENST00000575333 GIPC3Q8TF64 312 aa8.49□□□□□ -1.05
TOM1L1-220ENST00000575333 DDI1Q8WTU0 396 aa8.49□□□□□ -1.05
TOM1L1-220ENST00000575333 CCDC127Q96BQ5 260 aa8.49□□□□□ -1.05
TOM1L1-220ENST00000575333 HSPBAP1Q96EW2 488 aa8.49□□□□□ -1.05
TOM1L1-220ENST00000575333 DYDC2Q96IM9 177 aa8.49□□□□□ -1.05
TOM1L1-220ENST00000575333 PRICKLE1Q96MT3 831 aaPredicted RBP8.49□□□□□ -1.05
TOM1L1-220ENST00000575333 PSKH2Q96QS6 385 aa8.49□□□□□ -1.05
TOM1L1-220ENST00000575333 AIFM2Q9BRQ8 373 aa8.49□□□□□ -1.05
TOM1L1-220ENST00000575333 IFT122Q9HBG6 1241 aa8.49□□□□□ -1.05
TOM1L1-220ENST00000575333 USP29Q9HBJ7 922 aa8.49□□□□□ -1.05
TOM1L1-220ENST00000575333 SLC38A10Q9HBR0 1119 aa8.49□□□□□ -1.05
TOM1L1-220ENST00000575333 NLRC4Q9NPP4 1024 aa8.49□□□□□ -1.05
TOM1L1-220ENST00000575333 TCF7L2Q9NQB0 619 aa8.49□□□□□ -1.05
TOM1L1-220ENST00000575333 DISC1Q9NRI5 854 aa8.49□□□□□ -1.05
TOM1L1-220ENST00000575333 RBM12Q9NTZ6 932 aaKnown RBP8.49□□□□□ -1.05
TOM1L1-220ENST00000575333 ARMC1Q9NVT9 282 aa8.49□□□□□ -1.05
TOM1L1-220ENST00000575333 TMCC3Q9ULS5 477 aa8.49□□□□□ -1.05
TOM1L1-220ENST00000575333 MAFFQ9ULX9 164 aa8.49□□□□□ -1.05
TOM1L1-220ENST00000575333 TDRKHQ9Y2W6 561 aaKnown RBP8.49□□□□□ -1.05
TOM1L1-220ENST00000575333 XIRP1Q702N8 1843 aaKnown RBP8.49□□□□□ -1.05
TOM1L1-220ENST00000575333 A0A1W2PP64 1363 aa8.49□□□□□ -1.05
TOM1L1-220ENST00000575333 MROH7-TTC4A0A0A0MT08 1334 aa8.48□□□□□ -1.05
TOM1L1-220ENST00000575333 ZNF536O15090 1300 aa8.48□□□□□ -1.05
TOM1L1-220ENST00000575333 LINC00854A0A1B0GVQ3 168 aa8.48□□□□□ -1.05
TOM1L1-220ENST00000575333 B3GALNT1O75752 331 aa8.48□□□□□ -1.05
TOM1L1-220ENST00000575333 ZCCHC18P0CG32 403 aa8.48□□□□□ -1.05
TOM1L1-220ENST00000575333 FDX1P10109 184 aa8.48□□□□□ -1.05
TOM1L1-220ENST00000575333 PABPC1P11940 636 aaKnown RBP8.48□□□□□ -1.05
TOM1L1-220ENST00000575333 CRABP2P29373 138 aa8.48□□□□□ -1.05
TOM1L1-220ENST00000575333 COG7P83436 770 aa8.48□□□□□ -1.05
TOM1L1-220ENST00000575333 AIMP1Q12904 312 aaKnown RBP8.48□□□□□ -1.05
TOM1L1-220ENST00000575333 DNAJC3Q13217 504 aa8.48□□□□□ -1.05
TOM1L1-220ENST00000575333 SPA17Q15506 151 aa8.48□□□□□ -1.05
TOM1L1-220ENST00000575333 PTPN21Q16825 1174 aa8.48□□□□□ -1.05
TOM1L1-220ENST00000575333 Q3C1V9 767 aa8.48□□□□□ -1.05
TOM1L1-220ENST00000575333 RABL6Q3YEC7 729 aaPredicted RBP8.48□□□□□ -1.05
TOM1L1-220ENST00000575333 BTNL9Q6UXG8 535 aa8.48□□□□□ -1.05
TOM1L1-220ENST00000575333 C4orf50Q6ZRC1 276 aa8.48□□□□□ -1.05
TOM1L1-220ENST00000575333 MIER3Q7Z3K6 550 aa8.48□□□□□ -1.05
TOM1L1-220ENST00000575333 HDGFL2Q7Z4V5 671 aaPredicted RBP8.48□□□□□ -1.05
TOM1L1-220ENST00000575333 VSIG1Q86XK7 387 aa8.48□□□□□ -1.05
TOM1L1-220ENST00000575333 ERI1Q8IV48 349 aaKnown RBP8.48□□□□□ -1.05
TOM1L1-220ENST00000575333 LINC00469Q8N7U9 141 aa8.48□□□□□ -1.05
TOM1L1-220ENST00000575333 LSMEM1Q8N8F7 131 aa8.48□□□□□ -1.05
TOM1L1-220ENST00000575333 SPATA5Q8NB90 893 aa8.48□□□□□ -1.05
TOM1L1-220ENST00000575333 ANGPTL6Q8NI99 470 aa8.48□□□□□ -1.05
TOM1L1-220ENST00000575333 RIOK1Q9BRS2 568 aaKnown RBP8.48□□□□□ -1.05
TOM1L1-220ENST00000575333 TMEM109Q9BVC6 243 aa8.48□□□□□ -1.05
TOM1L1-220ENST00000575333 DENND2DQ9H6A0 471 aaPredicted RBP8.48□□□□□ -1.05
TOM1L1-220ENST00000575333 C10orf88Q9H8K7 445 aa8.48□□□□□ -1.05
TOM1L1-220ENST00000575333 TCP11L1Q9NUJ3 509 aa8.48□□□□□ -1.05
TOM1L1-220ENST00000575333 TRIM10Q9UDY6 481 aa8.48□□□□□ -1.05
TOM1L1-220ENST00000575333 SEC23IPQ9Y6Y8 1000 aaKnown RBP8.48□□□□□ -1.05
TOM1L1-220ENST00000575333 CARMIL3Q8ND23 1372 aa8.48□□□□□ -1.05
TOM1L1-220ENST00000575333 GAKO14976 1311 aa8.48□□□□□ -1.05
TOM1L1-220ENST00000575333 PVALEFA0A1B0GWK0 134 aa8.47□□□□□ -1.05
TOM1L1-220ENST00000575333 H0Y3Z8 333 aa8.47□□□□□ -1.05
TOM1L1-220ENST00000575333 AP3B1O00203 1094 aa8.47□□□□□ -1.05
TOM1L1-220ENST00000575333 ALOX15BO15296 676 aa8.47□□□□□ -1.05
TOM1L1-220ENST00000575333 TRMUO75648 421 aaKnown RBP8.47□□□□□ -1.05
TOM1L1-220ENST00000575333 KRT75O95678 551 aa8.47□□□□□ -1.05
TOM1L1-220ENST00000575333 OCM2P0CE71 109 aa8.47□□□□□ -1.05
TOM1L1-220ENST00000575333 OCMP0CE72 109 aaPredicted RBP8.47□□□□□ -1.05
TOM1L1-220ENST00000575333 PTPN4P29074 926 aa8.47□□□□□ -1.05
TOM1L1-220ENST00000575333 KRT2P35908 639 aa8.47□□□□□ -1.05
TOM1L1-220ENST00000575333 IARSP41252 1262 aaKnown RBP8.47□□□□□ -1.05
TOM1L1-220ENST00000575333 YARSP54577 528 aaKnown RBP8.47□□□□□ -1.05
TOM1L1-220ENST00000575333 NUP107P57740 925 aa8.47□□□□□ -1.05
TOM1L1-220ENST00000575333 NOP14P78316 857 aaKnown RBP8.47□□□□□ -1.05
TOM1L1-220ENST00000575333 KCNC4Q03721 635 aa8.47□□□□□ -1.05
TOM1L1-220ENST00000575333 GRIN1Q05586 938 aa8.47□□□□□ -1.05
TOM1L1-220ENST00000575333 RNASELQ05823 741 aaKnown RBP8.47□□□□□ -1.05
TOM1L1-220ENST00000575333 NIPAL4Q0D2K0 466 aa8.47□□□□□ -1.05
TOM1L1-220ENST00000575333 ASPHQ12797 758 aa8.47□□□□□ -1.05
TOM1L1-220ENST00000575333 TNIP1Q15025 636 aa8.47□□□□□ -1.05
TOM1L1-220ENST00000575333 CRY1Q16526 586 aa8.47□□□□□ -1.05
TOM1L1-220ENST00000575333 ZC2HC1CQ53FD0 456 aaPredicted RBP8.47□□□□□ -1.05
TOM1L1-220ENST00000575333 SLC27A3Q5K4L6 730 aa8.47□□□□□ -1.05
TOM1L1-220ENST00000575333 C6orf118Q5T5N4 469 aa8.47□□□□□ -1.05
TOM1L1-220ENST00000575333 SPOPLQ6IQ16 392 aa8.47□□□□□ -1.05
TOM1L1-220ENST00000575333 VASH1Q7L8A9 365 aaPredicted RBP8.47□□□□□ -1.05
TOM1L1-220ENST00000575333 USHBP1Q8N6Y0 703 aa8.47□□□□□ -1.05
TOM1L1-220ENST00000575333 SLC17A8Q8NDX2 589 aa8.47□□□□□ -1.05
TOM1L1-220ENST00000575333 UBLCP1Q8WVY7 318 aaPredicted RBP8.47□□□□□ -1.05
TOM1L1-220ENST00000575333 PEX13Q92968 403 aa8.47□□□□□ -1.05
TOM1L1-220ENST00000575333 BORCS5Q969J3 196 aa8.47□□□□□ -1.05
TOM1L1-220ENST00000575333 SPATA17Q96L03 361 aa8.47□□□□□ -1.05
TOM1L1-220ENST00000575333 ECSITQ9BQ95 431 aa8.47□□□□□ -1.05
TOM1L1-220ENST00000575333 SELENOSQ9BQE4 189 aa8.47□□□□□ -1.05
TOM1L1-220ENST00000575333 NEURL2Q9BR09 285 aa8.47□□□□□ -1.05
TOM1L1-220ENST00000575333 TBC1D10AQ9BXI6 508 aa8.47□□□□□ -1.05
TOM1L1-220ENST00000575333 SHCBP1LQ9BZQ2 653 aa8.47□□□□□ -1.05
TOM1L1-220ENST00000575333 SH2D4AQ9H788 454 aa8.47□□□□□ -1.05
TOM1L1-220ENST00000575333 CAAP1Q9H8G2 361 aa8.47□□□□□ -1.05
TOM1L1-220ENST00000575333 PSTPIP2Q9H939 334 aa8.47□□□□□ -1.05
TOM1L1-220ENST00000575333 SAR1AQ9NR31 198 aa8.47□□□□□ -1.05
TOM1L1-220ENST00000575333 MTRF1LQ9UGC7 380 aaKnown RBP8.47□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms