RNA–Protein interactions for RNA: ENST00000574799.5

CCDC40-212, Transcript of coiled-coil domain containing 40, humanhuman

TSL 1 (best)

Gene CCDC40, Length 3,795 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC40-212ENST00000574799 VHLP40337 213 aa10.25□□□□□ -0.77
CCDC40-212ENST00000574799 TNNI2P48788 182 aa10.25□□□□□ -0.77
CCDC40-212ENST00000574799 SCNN1BP51168 640 aa10.25□□□□□ -0.77
CCDC40-212ENST00000574799 SLC15A2Q16348 729 aa10.25□□□□□ -0.77
CCDC40-212ENST00000574799 LARP7Q4G0J3 582 aaKnown RBP eCLIP10.25□□□□□ -0.77
CCDC40-212ENST00000574799 ACBD5Q5T8D3 534 aaPredicted RBP10.25□□□□□ -0.77
CCDC40-212ENST00000574799 CYP4F22Q6NT55 531 aa10.25□□□□□ -0.77
CCDC40-212ENST00000574799 NEK8Q86SG6 692 aa10.25□□□□□ -0.77
CCDC40-212ENST00000574799 KIAA0825Q8IV33 1275 aa10.25□□□□□ -0.77
CCDC40-212ENST00000574799 TTC8Q8TAM2 541 aa10.25□□□□□ -0.77
CCDC40-212ENST00000574799 JMJD4Q9H9V9 463 aa10.25□□□□□ -0.77
CCDC40-212ENST00000574799 PCDHB13Q9Y5F0 798 aa10.25□□□□□ -0.77
CCDC40-212ENST00000574799 COL2A1P02458 1487 aaPredicted RBP10.24□□□□□ -0.77
CCDC40-212ENST00000574799 CNTNAP1P78357 1384 aa10.24□□□□□ -0.77
CCDC40-212ENST00000574799 MYO3BQ8WXR4 1341 aa10.24□□□□□ -0.77
CCDC40-212ENST00000574799 LMNAP02545 664 aaKnown RBP10.24□□□□□ -0.77
CCDC40-212ENST00000574799 ECHS1P30084 290 aa10.24□□□□□ -0.77
CCDC40-212ENST00000574799 TUBP50607 506 aa10.24□□□□□ -0.77
CCDC40-212ENST00000574799 EIF6P56537 245 aaKnown RBP10.24□□□□□ -0.77
CCDC40-212ENST00000574799 EN1Q05925 392 aaPredicted RBP10.24□□□□□ -0.77
CCDC40-212ENST00000574799 DNAJC3Q13217 504 aa10.24□□□□□ -0.77
CCDC40-212ENST00000574799 AOC3Q16853 763 aa10.24□□□□□ -0.77
CCDC40-212ENST00000574799 ARHGAP44Q17R89 818 aa10.24□□□□□ -0.77
CCDC40-212ENST00000574799 KRT25Q7Z3Z0 450 aa10.24□□□□□ -0.77
CCDC40-212ENST00000574799 CDAN1Q8IWY9 1227 aa10.24□□□□□ -0.77
CCDC40-212ENST00000574799 RBBP8NLQ8NC74 664 aaPredicted RBP10.24□□□□□ -0.77
CCDC40-212ENST00000574799 RNF25Q96BH1 459 aaPredicted RBP10.24□□□□□ -0.77
CCDC40-212ENST00000574799 MTMR9Q96QG7 549 aa10.24□□□□□ -0.77
CCDC40-212ENST00000574799 DDX50Q9BQ39 737 aaKnown RBP10.24□□□□□ -0.77
CCDC40-212ENST00000574799 ARHGEF3Q9NR81 526 aa10.24□□□□□ -0.77
CCDC40-212ENST00000574799 USP40Q9NVE5 1235 aa10.24□□□□□ -0.77
CCDC40-212ENST00000574799 DCTN4Q9UJW0 460 aa10.24□□□□□ -0.77
CCDC40-212ENST00000574799 SMCO2A6NFE2 343 aa10.24□□□□□ -0.77
CCDC40-212ENST00000574799 FAM187AA6NFU0 413 aa10.24□□□□□ -0.77
CCDC40-212ENST00000574799 LAD1O00515 517 aa10.24□□□□□ -0.77
CCDC40-212ENST00000574799 SPAG7O75391 227 aa10.24□□□□□ -0.77
CCDC40-212ENST00000574799 DCTN3O75935 186 aa10.24□□□□□ -0.77
CCDC40-212ENST00000574799 NPTXRO95502 500 aa10.24□□□□□ -0.77
CCDC40-212ENST00000574799 PYGBP11216 843 aa10.24□□□□□ -0.77
CCDC40-212ENST00000574799 SLC9A1P19634 815 aa10.24□□□□□ -0.77
CCDC40-212ENST00000574799 SMARCA1P28370 1054 aa10.24□□□□□ -0.77
CCDC40-212ENST00000574799 GNA11P29992 359 aa10.24□□□□□ -0.77
CCDC40-212ENST00000574799 GSTT1P30711 240 aa10.24□□□□□ -0.77
CCDC40-212ENST00000574799 ALDH1B1P30837 517 aa10.24□□□□□ -0.77
CCDC40-212ENST00000574799 SH2D4BQ5SQS7 431 aa10.24□□□□□ -0.77
CCDC40-212ENST00000574799 SNX30Q5VWJ9 437 aa10.24□□□□□ -0.77
CCDC40-212ENST00000574799 PPP1R21Q6ZMI0 780 aa10.24□□□□□ -0.77
CCDC40-212ENST00000574799 APLFQ8IW19 511 aaPredicted RBP10.24□□□□□ -0.77
CCDC40-212ENST00000574799 ZNF444Q8N0Y2 327 aaPredicted RBP10.24□□□□□ -0.77
CCDC40-212ENST00000574799 CFAP61Q8NHU2 1237 aa10.24□□□□□ -0.77
CCDC40-212ENST00000574799 UCMAQ8WVF2 138 aa10.24□□□□□ -0.77
CCDC40-212ENST00000574799 CRYGNQ8WXF5 182 aa10.24□□□□□ -0.77
CCDC40-212ENST00000574799 C18orf8Q96DM3 657 aa10.24□□□□□ -0.77
CCDC40-212ENST00000574799 SMC6Q96SB8 1091 aa10.24□□□□□ -0.77
CCDC40-212ENST00000574799 MRIQ9BWK5 157 aa10.24□□□□□ -0.77
CCDC40-212ENST00000574799 IDI2Q9BXS1 227 aa10.24□□□□□ -0.77
CCDC40-212ENST00000574799 LRCH1Q9Y2L9 728 aa10.24□□□□□ -0.77
CCDC40-212ENST00000574799 PAPPA2Q9BXP8 1791 aa10.24□□□□□ -0.77
CCDC40-212ENST00000574799 WDR91A4D1P6 747 aa10.24□□□□□ -0.77
CCDC40-212ENST00000574799 POTEMA6NI47 508 aa10.24□□□□□ -0.77
CCDC40-212ENST00000574799 RASA4BC9J798 803 aa10.24□□□□□ -0.77
CCDC40-212ENST00000574799 POC1B-GALNT4F8VUJ3 575 aa10.24□□□□□ -0.77
CCDC40-212ENST00000574799 CAPN9O14815 690 aa10.24□□□□□ -0.77
CCDC40-212ENST00000574799 RASA4O43374 803 aa10.24□□□□□ -0.77
CCDC40-212ENST00000574799 SLC37A4O43826 429 aa10.24□□□□□ -0.77
CCDC40-212ENST00000574799 CBX6O95503 412 aa10.24□□□□□ -0.77
CCDC40-212ENST00000574799 KCNJ1P48048 391 aa10.24□□□□□ -0.77
CCDC40-212ENST00000574799 FKBP1AP62942 108 aaKnown RBP10.24□□□□□ -0.77
CCDC40-212ENST00000574799 TMED1Q13445 227 aa10.24□□□□□ -0.77
CCDC40-212ENST00000574799 MESDQ14696 234 aa10.24□□□□□ -0.77
CCDC40-212ENST00000574799 CCDC62Q6P9F0 684 aa10.24□□□□□ -0.77
CCDC40-212ENST00000574799 CCDC137Q6PK04 289 aaKnown RBP10.24□□□□□ -0.77
CCDC40-212ENST00000574799 ZNF571Q7Z3V5 609 aaPredicted RBP10.24□□□□□ -0.77
CCDC40-212ENST00000574799 HIC2Q96JB3 615 aa10.24□□□□□ -0.77
CCDC40-212ENST00000574799 CENPKQ9BS16 269 aa10.24□□□□□ -0.77
CCDC40-212ENST00000574799 MYLK2Q9H1R3 596 aa10.24□□□□□ -0.77
CCDC40-212ENST00000574799 ZFP69BQ9UJL9 534 aa10.24□□□□□ -0.77
CCDC40-212ENST00000574799 HDAC9Q9UKV0 1011 aa10.24□□□□□ -0.77
CCDC40-212ENST00000574799 FOXO6A8MYZ6 492 aa10.23□□□□□ -0.77
CCDC40-212ENST00000574799 GYG2O15488 501 aa10.23□□□□□ -0.77
CCDC40-212ENST00000574799 GSTA2P09210 222 aa10.23□□□□□ -0.77
CCDC40-212ENST00000574799 GALCP54803 685 aa10.23□□□□□ -0.77
CCDC40-212ENST00000574799 ECM1Q16610 540 aa10.23□□□□□ -0.77
CCDC40-212ENST00000574799 SLC5A9Q2M3M2 681 aa10.23□□□□□ -0.77
CCDC40-212ENST00000574799 GLYCTKQ8IVS8 523 aa10.23□□□□□ -0.77
CCDC40-212ENST00000574799 OSGEPQ9NPF4 335 aa10.23□□□□□ -0.77
CCDC40-212ENST00000574799 WDR35Q9P2L0 1181 aa10.23□□□□□ -0.77
CCDC40-212ENST00000574799 SUCLA2Q9P2R7 463 aaPredicted RBP10.23□□□□□ -0.77
CCDC40-212ENST00000574799 PODXLO00592 558 aa10.23□□□□□ -0.77
CCDC40-212ENST00000574799 TAL1P17542 331 aaPredicted RBP10.23□□□□□ -0.77
CCDC40-212ENST00000574799 MARK3P27448 753 aa10.23□□□□□ -0.77
CCDC40-212ENST00000574799 MAPK7Q13164 816 aa10.23□□□□□ -0.77
CCDC40-212ENST00000574799 ZC3H12AQ5D1E8 599 aaKnown RBP10.23□□□□□ -0.77
CCDC40-212ENST00000574799 STRIP1Q5VSL9 837 aa10.23□□□□□ -0.77
CCDC40-212ENST00000574799 IRGCQ6NXR0 463 aa10.23□□□□□ -0.77
CCDC40-212ENST00000574799 CCNJLQ8IV13 435 aa10.23□□□□□ -0.77
CCDC40-212ENST00000574799 ADGRF4Q8IZF3 695 aa10.23□□□□□ -0.77
CCDC40-212ENST00000574799 ANKRD35Q8N283 1001 aa10.23□□□□□ -0.77
CCDC40-212ENST00000574799 FAM13CQ8NE31 585 aa10.23□□□□□ -0.77
CCDC40-212ENST00000574799 GLIS3Q8NEA6 775 aa10.23□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms