RNA–Protein interactions for RNA: ENST00000574545.1

SCARF1-208, Transcript of scavenger receptor class F member 1, humanhuman

TSL 1 (best)

Gene SCARF1, Length 894 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARF1-208ENST00000574545 AK8Q96MA6 479 aa21.72■■□□□ 1.07
SCARF1-208ENST00000574545 NT5C3AQ9H0P0 336 aa21.72■■□□□ 1.07
SCARF1-208ENST00000574545 USP15Q9Y4E8 981 aaPredicted RBP21.72■■□□□ 1.07
SCARF1-208ENST00000574545 PDCP20941 246 aa21.71■■□□□ 1.07
SCARF1-208ENST00000574545 SLC12A3P55017 1021 aa21.71■■□□□ 1.07
SCARF1-208ENST00000574545 PEX3P56589 373 aa21.71■■□□□ 1.07
SCARF1-208ENST00000574545 GRIN1Q05586 938 aa21.71■■□□□ 1.07
SCARF1-208ENST00000574545 PTPN14Q15678 1187 aa21.71■■□□□ 1.07
SCARF1-208ENST00000574545 TAS1R3Q7RTX0 852 aa21.71■■□□□ 1.07
SCARF1-208ENST00000574545 LRRC15Q8TF66 581 aa21.71■■□□□ 1.07
SCARF1-208ENST00000574545 NTPCRQ9BSD7 190 aaKnown RBP21.71■■□□□ 1.07
SCARF1-208ENST00000574545 C17orf75Q9HAS0 396 aa21.71■■□□□ 1.07
SCARF1-208ENST00000574545 SNTG2Q9NY99 539 aa21.71■■□□□ 1.07
SCARF1-208ENST00000574545 ARHGAP28Q9P2N2 729 aa21.71■■□□□ 1.07
SCARF1-208ENST00000574545 STK39Q9UEW8 545 aa21.71■■□□□ 1.07
SCARF1-208ENST00000574545 SLC26A4O43511 780 aa21.7■■□□□ 1.06
SCARF1-208ENST00000574545 BMP15O95972 392 aa21.7■■□□□ 1.06
SCARF1-208ENST00000574545 SYT1P21579 422 aa21.7■■□□□ 1.06
SCARF1-208ENST00000574545 SSTR3P32745 418 aaPredicted RBP21.7■■□□□ 1.06
SCARF1-208ENST00000574545 GIT2Q14161 759 aa21.7■■□□□ 1.06
SCARF1-208ENST00000574545 BMS1Q14692 1282 aaKnown RBP21.7■■□□□ 1.06
SCARF1-208ENST00000574545 SF3A1Q15459 793 aaKnown RBP21.7■■□□□ 1.06
SCARF1-208ENST00000574545 LLGL2Q6P1M3 1020 aa21.7■■□□□ 1.06
SCARF1-208ENST00000574545 CABP7Q86V35 215 aa21.7■■□□□ 1.06
SCARF1-208ENST00000574545 PLIN2Q99541 437 aa21.7■■□□□ 1.06
SCARF1-208ENST00000574545 TIPINQ9BVW5 301 aa21.7■■□□□ 1.06
SCARF1-208ENST00000574545 CXCL16Q9H2A7 254 aa21.7■■□□□ 1.06
SCARF1-208ENST00000574545 TMEM134Q9H6X4 195 aa21.7■■□□□ 1.06
SCARF1-208ENST00000574545 KLK14Q9P0G3 267 aa21.7■■□□□ 1.06
SCARF1-208ENST00000574545 DAXXQ9UER7 740 aaPredicted RBP21.7■■□□□ 1.06
SCARF1-208ENST00000574545 PARP2Q9UGN5 583 aa21.7■■□□□ 1.06
SCARF1-208ENST00000574545 PRG3Q9Y2Y8 225 aaPredicted RBP21.7■■□□□ 1.06
SCARF1-208ENST00000574545 TDRD15B5MCY1 1934 aaKnown RBP21.7■■□□□ 1.06
SCARF1-208ENST00000574545 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP21.69■■□□□ 1.06
SCARF1-208ENST00000574545 VPS37CA5D8V6 355 aaPredicted RBP21.69■■□□□ 1.06
SCARF1-208ENST00000574545 F8W810 466 aa21.69■■□□□ 1.06
SCARF1-208ENST00000574545 K7ERI5 159 aa21.69■■□□□ 1.06
SCARF1-208ENST00000574545 SOD2P04179 222 aa21.69■■□□□ 1.06
SCARF1-208ENST00000574545 HOXB8P17481 243 aaPredicted RBP21.69■■□□□ 1.06
SCARF1-208ENST00000574545 LIG1P18858 919 aa21.69■■□□□ 1.06
SCARF1-208ENST00000574545 OR1G1P47890 313 aa21.69■■□□□ 1.06
SCARF1-208ENST00000574545 GRIK3Q13003 919 aa21.69■■□□□ 1.06
SCARF1-208ENST00000574545 RESTQ13127 1097 aa21.69■■□□□ 1.06
SCARF1-208ENST00000574545 PTPAQ15257 358 aa21.69■■□□□ 1.06
SCARF1-208ENST00000574545 ZRSR1Q15695 479 aaKnown RBP21.69■■□□□ 1.06
SCARF1-208ENST00000574545 NAB2Q15742 525 aa21.69■■□□□ 1.06
SCARF1-208ENST00000574545 TAS1R1Q7RTX1 841 aa21.69■■□□□ 1.06
SCARF1-208ENST00000574545 SLC22A17Q8WUG5 538 aa21.69■■□□□ 1.06
SCARF1-208ENST00000574545 CASP10Q92851 521 aa21.69■■□□□ 1.06
SCARF1-208ENST00000574545 DRC1Q96MC2 740 aa21.69■■□□□ 1.06
SCARF1-208ENST00000574545 C1QTNF1Q9BXJ1 281 aa21.69■■□□□ 1.06
SCARF1-208ENST00000574545 PTPRHQ9HD43 1115 aa21.69■■□□□ 1.06
SCARF1-208ENST00000574545 SFI1A8K8P3 1242 aa21.68■■□□□ 1.06
SCARF1-208ENST00000574545 K7ELQ4 463 aaPredicted RBP21.68■■□□□ 1.06
SCARF1-208ENST00000574545 PTGESO14684 152 aa21.68■■□□□ 1.06
SCARF1-208ENST00000574545 PLA2G4BP0C869 781 aa21.68■■□□□ 1.06
SCARF1-208ENST00000574545 SRGAP2BP0DMP2 458 aa21.68■■□□□ 1.06
SCARF1-208ENST00000574545 ARSHQ5FYA8 562 aa21.68■■□□□ 1.06
SCARF1-208ENST00000574545 ATF7IP2Q5U623 682 aa21.68■■□□□ 1.06
SCARF1-208ENST00000574545 SPIRE2Q8WWL2 714 aa21.68■■□□□ 1.06
SCARF1-208ENST00000574545 KLHL5Q96PQ7 755 aa21.68■■□□□ 1.06
SCARF1-208ENST00000574545 ACO2Q99798 780 aaKnown RBP21.68■■□□□ 1.06
SCARF1-208ENST00000574545 ADPGKQ9BRR6 497 aa21.68■■□□□ 1.06
SCARF1-208ENST00000574545 HERC2P3Q9BVR0 1158 aa21.68■■□□□ 1.06
SCARF1-208ENST00000574545 C11orf16Q9NQ32 467 aa21.68■■□□□ 1.06
SCARF1-208ENST00000574545 TNFSF13BQ9Y275 285 aa21.68■■□□□ 1.06
SCARF1-208ENST00000574545 RBM19Q9Y4C8 960 aaKnown RBP21.68■■□□□ 1.06
SCARF1-208ENST00000574545 PHLPP2Q6ZVD8 1323 aa21.67■■□□□ 1.06
SCARF1-208ENST00000574545 CCDC169A6NNP5 214 aa21.67■■□□□ 1.06
SCARF1-208ENST00000574545 LOC730098B7Z3J9 87 aa21.67■■□□□ 1.06
SCARF1-208ENST00000574545 RECQL4O94761 1208 aa21.67■■□□□ 1.06
SCARF1-208ENST00000574545 LONP1P36776 959 aaKnown RBP21.67■■□□□ 1.06
SCARF1-208ENST00000574545 DMP1Q13316 513 aaPredicted RBP21.67■■□□□ 1.06
SCARF1-208ENST00000574545 CBX2Q14781 532 aaPredicted RBP21.67■■□□□ 1.06
SCARF1-208ENST00000574545 DCAF4L1Q3SXM0 396 aa21.67■■□□□ 1.06
SCARF1-208ENST00000574545 KIAA0319Q5VV43 1072 aa21.67■■□□□ 1.06
SCARF1-208ENST00000574545 POP1Q99575 1024 aaKnown RBP21.67■■□□□ 1.06
SCARF1-208ENST00000574545 PHF7Q9BWX1 381 aaPredicted RBP21.67■■□□□ 1.06
SCARF1-208ENST00000574545 KMT5AQ9NQR1 393 aa21.67■■□□□ 1.06
SCARF1-208ENST00000574545 CHST7Q9NS84 486 aa21.67■■□□□ 1.06
SCARF1-208ENST00000574545 BLOC1S4Q9NUP1 217 aa21.67■■□□□ 1.06
SCARF1-208ENST00000574545 KCND2Q9NZV8 630 aa21.67■■□□□ 1.06
SCARF1-208ENST00000574545 MTMR6Q9Y217 621 aa21.67■■□□□ 1.06
SCARF1-208ENST00000574545 CLIC4Q9Y696 253 aa21.67■■□□□ 1.06
SCARF1-208ENST00000574545 ABLIM1O14639 778 aa21.66■■□□□ 1.06
SCARF1-208ENST00000574545 CNPP09543 421 aaKnown RBP21.66■■□□□ 1.06
SCARF1-208ENST00000574545 EPCAMP16422 314 aa21.66■■□□□ 1.06
SCARF1-208ENST00000574545 FAM173BQ6P4H8 233 aa21.66■■□□□ 1.06
SCARF1-208ENST00000574545 KCNN1Q92952 543 aa21.66■■□□□ 1.06
SCARF1-208ENST00000574545 SNX21Q969T3 373 aa21.66■■□□□ 1.06
SCARF1-208ENST00000574545 CDK5RAP3Q96JB5 506 aa21.66■■□□□ 1.06
SCARF1-208ENST00000574545 PAAF1Q9BRP4 392 aa21.66■■□□□ 1.06
SCARF1-208ENST00000574545 COLEC11Q9BWP8 271 aa21.66■■□□□ 1.06
SCARF1-208ENST00000574545 NR1I2O75469 434 aa21.65■■□□□ 1.06
SCARF1-208ENST00000574545 SSBP05455 408 aaKnown RBP eCLIP21.65■■□□□ 1.06
SCARF1-208ENST00000574545 PLS3P13797 630 aa21.65■■□□□ 1.06
SCARF1-208ENST00000574545 PROZP22891 400 aa21.65■■□□□ 1.06
SCARF1-208ENST00000574545 CA8P35219 290 aa21.65■■□□□ 1.06
SCARF1-208ENST00000574545 UBA7P41226 1012 aa21.65■■□□□ 1.06
SCARF1-208ENST00000574545 RAD51AP2Q09MP3 1159 aa21.65■■□□□ 1.06
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms