RNA–Protein interactions for RNA: ENST00000574054.1

CHRNB1-206, Transcript of cholinergic receptor nicotinic beta 1 subunit, humanhuman

TSL 2

Gene CHRNB1, Length 583 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNB1-206ENST00000574054 DSC1Q08554 894 aa23.39■■□□□ 1.33
CHRNB1-206ENST00000574054 NBR1Q14596 966 aa23.39■■□□□ 1.33
CHRNB1-206ENST00000574054 TDRD5Q8NAT2 981 aaKnown RBP23.39■■□□□ 1.33
CHRNB1-206ENST00000574054 KREMEN2Q8NCW0 462 aa23.39■■□□□ 1.33
CHRNB1-206ENST00000574054 A0A1B0GUA9 196 aa23.38■■□□□ 1.33
CHRNB1-206ENST00000574054 F8W810 466 aa23.38■■□□□ 1.33
CHRNB1-206ENST00000574054 LILRB3O75022 631 aa23.38■■□□□ 1.33
CHRNB1-206ENST00000574054 LIG1P18858 919 aa23.38■■□□□ 1.33
CHRNB1-206ENST00000574054 CCT6AP40227 531 aaKnown RBP23.38■■□□□ 1.33
CHRNB1-206ENST00000574054 GLUD2P49448 558 aa23.38■■□□□ 1.33
CHRNB1-206ENST00000574054 HAUS3Q68CZ6 603 aa23.38■■□□□ 1.33
CHRNB1-206ENST00000574054 CDCA2Q69YH5 1023 aaPredicted RBP23.38■■□□□ 1.33
CHRNB1-206ENST00000574054 PPP4R3CPQ6ZMV5 832 aa23.38■■□□□ 1.33
CHRNB1-206ENST00000574054 FEZF2Q8TBJ5 459 aa23.38■■□□□ 1.33
CHRNB1-206ENST00000574054 RPS6KC1Q96S38 1066 aa23.38■■□□□ 1.33
CHRNB1-206ENST00000574054 C2orf40Q9H1Z8 148 aa23.38■■□□□ 1.33
CHRNB1-206ENST00000574054 SSX2IPQ9Y2D8 614 aa23.38■■□□□ 1.33
CHRNB1-206ENST00000574054 ADH1AP07327 375 aa23.37■■□□□ 1.33
CHRNB1-206ENST00000574054 CYP11B2P19099 503 aa23.37■■□□□ 1.33
CHRNB1-206ENST00000574054 TRAPPC10P48553 1259 aa23.37■■□□□ 1.33
CHRNB1-206ENST00000574054 FBXL6Q8N531 539 aa23.37■■□□□ 1.33
CHRNB1-206ENST00000574054 DEPTORQ8TB45 409 aa23.37■■□□□ 1.33
CHRNB1-206ENST00000574054 BSNDQ8WZ55 320 aa23.37■■□□□ 1.33
CHRNB1-206ENST00000574054 ASIC4Q96FT7 647 aa23.37■■□□□ 1.33
CHRNB1-206ENST00000574054 PRIMPOLQ96LW4 560 aa23.37■■□□□ 1.33
CHRNB1-206ENST00000574054 KIF2CQ99661 725 aa23.37■■□□□ 1.33
CHRNB1-206ENST00000574054 COLEC11Q9BWP8 271 aa23.37■■□□□ 1.33
CHRNB1-206ENST00000574054 PRKCBP05771 671 aa23.36■■□□□ 1.33
CHRNB1-206ENST00000574054 NHLH1Q02575 133 aa23.36■■□□□ 1.33
CHRNB1-206ENST00000574054 GRIK3Q13003 919 aa23.36■■□□□ 1.33
CHRNB1-206ENST00000574054 PRPF4BQ13523 1007 aaKnown RBP23.36■■□□□ 1.33
CHRNB1-206ENST00000574054 C8orf34Q49A92 452 aa23.36■■□□□ 1.33
CHRNB1-206ENST00000574054 RABGGTAQ92696 567 aa23.36■■□□□ 1.33
CHRNB1-206ENST00000574054 TTLL13PA6NNM8 815 aa23.35■■□□□ 1.33
CHRNB1-206ENST00000574054 N4BP3O15049 544 aa23.35■■□□□ 1.33
CHRNB1-206ENST00000574054 TEX28O15482 410 aa23.35■■□□□ 1.33
CHRNB1-206ENST00000574054 MYBP10242 640 aa23.35■■□□□ 1.33
CHRNB1-206ENST00000574054 FXR2P51116 673 aaKnown RBP eCLIP23.35■■□□□ 1.33
CHRNB1-206ENST00000574054 MTMR3Q13615 1198 aa23.35■■□□□ 1.33
CHRNB1-206ENST00000574054 MAPK6Q16659 721 aa23.35■■□□□ 1.33
CHRNB1-206ENST00000574054 FAM187BQ17R55 369 aa23.35■■□□□ 1.33
CHRNB1-206ENST00000574054 GPR149Q86SP6 731 aa23.35■■□□□ 1.33
CHRNB1-206ENST00000574054 GSTCDQ8NEC7 633 aa23.35■■□□□ 1.33
CHRNB1-206ENST00000574054 B3GALT6Q96L58 329 aa23.35■■□□□ 1.33
CHRNB1-206ENST00000574054 FZD8Q9H461 694 aa23.35■■□□□ 1.33
CHRNB1-206ENST00000574054 PDZD7Q9H5P4 517 aa23.35■■□□□ 1.33
CHRNB1-206ENST00000574054 MAN1C1Q9NR34 630 aa23.35■■□□□ 1.33
CHRNB1-206ENST00000574054 LRWD1Q9UFC0 647 aa23.35■■□□□ 1.33
CHRNB1-206ENST00000574054 LIMD1Q9UGP4 676 aa23.35■■□□□ 1.33
CHRNB1-206ENST00000574054 SORCS3Q9UPU3 1222 aa23.35■■□□□ 1.33
CHRNB1-206ENST00000574054 TDRD15B5MCY1 1934 aaKnown RBP23.34■■□□□ 1.33
CHRNB1-206ENST00000574054 ASGR2P07307 311 aa23.34■■□□□ 1.33
CHRNB1-206ENST00000574054 NAMPTP43490 491 aa23.34■■□□□ 1.33
CHRNB1-206ENST00000574054 PPP2R5AQ15172 486 aa23.34■■□□□ 1.33
CHRNB1-206ENST00000574054 ECM1Q16610 540 aa23.34■■□□□ 1.33
CHRNB1-206ENST00000574054 KIAA0319Q5VV43 1072 aa23.34■■□□□ 1.33
CHRNB1-206ENST00000574054 CCDC149Q6ZUS6 474 aa23.34■■□□□ 1.33
CHRNB1-206ENST00000574054 ALYREFQ86V81 257 aaKnown RBP23.34■■□□□ 1.33
CHRNB1-206ENST00000574054 RNF168Q8IYW5 571 aaPredicted RBP23.34■■□□□ 1.33
CHRNB1-206ENST00000574054 C4orf32Q8N8J7 132 aa23.34■■□□□ 1.33
CHRNB1-206ENST00000574054 IFT74Q96LB3 600 aa23.34■■□□□ 1.33
CHRNB1-206ENST00000574054 KIFC3Q9BVG8 833 aa23.34■■□□□ 1.33
CHRNB1-206ENST00000574054 BHMT2Q9H2M3 363 aa23.34■■□□□ 1.33
CHRNB1-206ENST00000574054 POLD4Q9HCU8 107 aa23.34■■□□□ 1.33
CHRNB1-206ENST00000574054 CACNG4Q9UBN1 327 aa23.34■■□□□ 1.33
CHRNB1-206ENST00000574054 USP20Q9Y2K6 914 aa23.34■■□□□ 1.33
CHRNB1-206ENST00000574054 ZMYM2Q9UBW7 1377 aa23.34■■□□□ 1.33
CHRNB1-206ENST00000574054 BRD1O95696 1058 aa23.33■■□□□ 1.33
CHRNB1-206ENST00000574054 GLUD1P00367 558 aa23.33■■□□□ 1.33
CHRNB1-206ENST00000574054 MUTP22033 750 aa23.33■■□□□ 1.33
CHRNB1-206ENST00000574054 DSG1Q02413 1049 aa23.33■■□□□ 1.33
CHRNB1-206ENST00000574054 PTGDRQ13258 359 aa23.33■■□□□ 1.33
CHRNB1-206ENST00000574054 IER5LQ5T953 404 aa23.33■■□□□ 1.33
CHRNB1-206ENST00000574054 FUT10Q6P4F1 479 aa23.33■■□□□ 1.33
CHRNB1-206ENST00000574054 ELMSAN1Q6PJG2 1045 aa23.33■■□□□ 1.33
CHRNB1-206ENST00000574054 UBALD2Q8IYN6 164 aa23.33■■□□□ 1.33
CHRNB1-206ENST00000574054 ZDHHC14Q8IZN3 488 aa23.33■■□□□ 1.33
CHRNB1-206ENST00000574054 PLCD3Q8N3E9 789 aa23.33■■□□□ 1.33
CHRNB1-206ENST00000574054 ACSF2Q96CM8 615 aaPredicted RBP23.33■■□□□ 1.33
CHRNB1-206ENST00000574054 ADPGKQ9BRR6 497 aa23.33■■□□□ 1.33
CHRNB1-206ENST00000574054 GPR62Q9BZJ7 368 aa23.33■■□□□ 1.33
CHRNB1-206ENST00000574054 DDX19AQ9NUU7 478 aaKnown RBP23.33■■□□□ 1.33
CHRNB1-206ENST00000574054 SNTG2Q9NY99 539 aa23.33■■□□□ 1.33
CHRNB1-206ENST00000574054 ADAM28Q9UKQ2 775 aa23.33■■□□□ 1.33
CHRNB1-206ENST00000574054 KIAA1024Q9UPX6 916 aa23.33■■□□□ 1.33
CHRNB1-206ENST00000574054 USTQ9Y2C2 406 aa23.33■■□□□ 1.33
CHRNB1-206ENST00000574054 TADA2AO75478 443 aa23.32■■□□□ 1.32
CHRNB1-206ENST00000574054 EFEMP2O95967 443 aa23.32■■□□□ 1.32
CHRNB1-206ENST00000574054 U2AF2P26368 475 aaKnown RBP eCLIP23.32■■□□□ 1.32
CHRNB1-206ENST00000574054 USP41Q3LFD5 358 aa23.32■■□□□ 1.32
CHRNB1-206ENST00000574054 PRSS33Q8NF86 280 aa23.32■■□□□ 1.32
CHRNB1-206ENST00000574054 SNX29Q8TEQ0 813 aa23.32■■□□□ 1.32
CHRNB1-206ENST00000574054 RAB34Q9BZG1 259 aa23.32■■□□□ 1.32
CHRNB1-206ENST00000574054 CCDC113Q9H0I3 377 aa23.32■■□□□ 1.32
CHRNB1-206ENST00000574054 SMOC2Q9H3U7 446 aa23.32■■□□□ 1.32
CHRNB1-206ENST00000574054 RXFP1Q9HBX9 757 aa23.32■■□□□ 1.32
CHRNB1-206ENST00000574054 DPP7Q9UHL4 492 aa23.32■■□□□ 1.32
CHRNB1-206ENST00000574054 PCDHB6Q9Y5E3 794 aa23.32■■□□□ 1.32
CHRNB1-206ENST00000574054 MYO10Q9HD67 2058 aa23.32■■□□□ 1.32
CHRNB1-206ENST00000574054 CASTOR2A6NHX0 329 aa23.31■■□□□ 1.32
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms