RNA–Protein interactions for RNA: ENST00000574003.1

RPAIN-214, Transcript of RPA interacting protein, humanhuman

TSL 4 BASIC

Gene RPAIN, Length 561 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAIN-214ENST00000574003 TMEM175Q9BSA9 504 aa12.51□□□□□ -0.41
RPAIN-214ENST00000574003 PRMT7Q9NVM4 692 aaPredicted RBP12.51□□□□□ -0.41
RPAIN-214ENST00000574003 SNTG2Q9NY99 539 aa12.51□□□□□ -0.41
RPAIN-214ENST00000574003 KANSL3Q9P2N6 904 aa12.51□□□□□ -0.41
RPAIN-214ENST00000574003 KIF3AQ9Y496 699 aa12.51□□□□□ -0.41
RPAIN-214ENST00000574003 NPHP3-ACAD11A0A0J9YXS1 232 aa12.5□□□□□ -0.41
RPAIN-214ENST00000574003 LOC730098B7Z3J9 87 aa12.5□□□□□ -0.41
RPAIN-214ENST00000574003 INPPL1O15357 1258 aa12.5□□□□□ -0.41
RPAIN-214ENST00000574003 GPR37L1O60883 481 aa12.5□□□□□ -0.41
RPAIN-214ENST00000574003 HIP1RO75146 1068 aa12.5□□□□□ -0.41
RPAIN-214ENST00000574003 CNPP09543 421 aaKnown RBP12.5□□□□□ -0.41
RPAIN-214ENST00000574003 NAMPTP43490 491 aa12.5□□□□□ -0.41
RPAIN-214ENST00000574003 PEX3P56589 373 aa12.5□□□□□ -0.41
RPAIN-214ENST00000574003 CACNB1Q02641 598 aaPredicted RBP12.5□□□□□ -0.41
RPAIN-214ENST00000574003 GRIN1Q05586 938 aa12.5□□□□□ -0.41
RPAIN-214ENST00000574003 MAPK7Q13164 816 aa12.5□□□□□ -0.41
RPAIN-214ENST00000574003 PCBP1Q15365 356 aaKnown RBP eCLIP12.5□□□□□ -0.41
RPAIN-214ENST00000574003 MAPK6Q16659 721 aa12.5□□□□□ -0.41
RPAIN-214ENST00000574003 FAM187BQ17R55 369 aa12.5□□□□□ -0.41
RPAIN-214ENST00000574003 RILPL1Q5EBL4 403 aa12.5□□□□□ -0.41
RPAIN-214ENST00000574003 KRT79Q5XKE5 535 aa12.5□□□□□ -0.41
RPAIN-214ENST00000574003 TMEM87AQ8NBN3 555 aa12.5□□□□□ -0.41
RPAIN-214ENST00000574003 LRRC15Q8TF66 581 aa12.5□□□□□ -0.41
RPAIN-214ENST00000574003 HASPINQ8TF76 798 aa12.5□□□□□ -0.41
RPAIN-214ENST00000574003 CASP10Q92851 521 aa12.5□□□□□ -0.41
RPAIN-214ENST00000574003 PHF7Q9BWX1 381 aaPredicted RBP12.5□□□□□ -0.41
RPAIN-214ENST00000574003 FOXD4L1Q9NU39 408 aa12.5□□□□□ -0.41
RPAIN-214ENST00000574003 DNM3Q9UQ16 869 aa12.5□□□□□ -0.41
RPAIN-214ENST00000574003 GDAQ9Y2T3 454 aa12.5□□□□□ -0.41
RPAIN-214ENST00000574003 GIT1Q9Y2X7 761 aa12.5□□□□□ -0.41
RPAIN-214ENST00000574003 CASTOR2A6NHX0 329 aa12.49□□□□□ -0.41
RPAIN-214ENST00000574003 CCDC169A6NNP5 214 aa12.49□□□□□ -0.41
RPAIN-214ENST00000574003 ACKR2O00590 384 aa12.49□□□□□ -0.41
RPAIN-214ENST00000574003 PTGESO14684 152 aa12.49□□□□□ -0.41
RPAIN-214ENST00000574003 N4BP3O15049 544 aa12.49□□□□□ -0.41
RPAIN-214ENST00000574003 LILRB3O75022 631 aa12.49□□□□□ -0.41
RPAIN-214ENST00000574003 RECQL4O94761 1208 aa12.49□□□□□ -0.41
RPAIN-214ENST00000574003 MUTP22033 750 aa12.49□□□□□ -0.41
RPAIN-214ENST00000574003 PRPHP41219 470 aa12.49□□□□□ -0.41
RPAIN-214ENST00000574003 MCM2P49736 904 aa12.49□□□□□ -0.41
RPAIN-214ENST00000574003 CBX2Q14781 532 aaPredicted RBP12.49□□□□□ -0.41
RPAIN-214ENST00000574003 GLRA4Q5JXX5 417 aa12.49□□□□□ -0.41
RPAIN-214ENST00000574003 RINT1Q6NUQ1 792 aa12.49□□□□□ -0.41
RPAIN-214ENST00000574003 C1orf186Q6ZWK4 172 aa12.49□□□□□ -0.41
RPAIN-214ENST00000574003 TAS1R3Q7RTX0 852 aa12.49□□□□□ -0.41
RPAIN-214ENST00000574003 GLYCTKQ8IVS8 523 aa12.49□□□□□ -0.41
RPAIN-214ENST00000574003 IFT74Q96LB3 600 aa12.49□□□□□ -0.41
RPAIN-214ENST00000574003 PRIMPOLQ96LW4 560 aa12.49□□□□□ -0.41
RPAIN-214ENST00000574003 POP1Q99575 1024 aaKnown RBP12.49□□□□□ -0.41
RPAIN-214ENST00000574003 HERC2P3Q9BVR0 1158 aa12.49□□□□□ -0.41
RPAIN-214ENST00000574003 RAB34Q9BZG1 259 aa12.49□□□□□ -0.41
RPAIN-214ENST00000574003 GPR62Q9BZJ7 368 aa12.49□□□□□ -0.41
RPAIN-214ENST00000574003 C2orf40Q9H1Z8 148 aa12.49□□□□□ -0.41
RPAIN-214ENST00000574003 POMKQ9H5K3 350 aa12.49□□□□□ -0.41
RPAIN-214ENST00000574003 UBN1Q9NPG3 1134 aa12.49□□□□□ -0.41
RPAIN-214ENST00000574003 TSHZ2Q9NRE2 1034 aa12.49□□□□□ -0.41
RPAIN-214ENST00000574003 TRIOO75962 3097 aa12.49□□□□□ -0.41
RPAIN-214ENST00000574003 PLXNA3P51805 1871 aa12.48□□□□□ -0.41
RPAIN-214ENST00000574003 VPS37CA5D8V6 355 aaPredicted RBP12.48□□□□□ -0.41
RPAIN-214ENST00000574003 LAD1O00515 517 aa12.48□□□□□ -0.41
RPAIN-214ENST00000574003 SLC16A4O15374 487 aa12.48□□□□□ -0.41
RPAIN-214ENST00000574003 EFEMP2O95967 443 aa12.48□□□□□ -0.41
RPAIN-214ENST00000574003 SOD2P04179 222 aa12.48□□□□□ -0.41
RPAIN-214ENST00000574003 SPATA31D3P0C874 917 aa12.48□□□□□ -0.41
RPAIN-214ENST00000574003 SRGAP2BP0DMP2 458 aa12.48□□□□□ -0.41
RPAIN-214ENST00000574003 ALADP13716 330 aa12.48□□□□□ -0.41
RPAIN-214ENST00000574003 RPL17P18621 184 aaKnown RBP12.48□□□□□ -0.41
RPAIN-214ENST00000574003 KLRC2P26717 231 aa12.48□□□□□ -0.41
RPAIN-214ENST00000574003 NPTX2P47972 431 aa12.48□□□□□ -0.41
RPAIN-214ENST00000574003 BMS1Q14692 1282 aaKnown RBP12.48□□□□□ -0.41
RPAIN-214ENST00000574003 PPP2R5AQ15172 486 aa12.48□□□□□ -0.41
RPAIN-214ENST00000574003 FAM173BQ6P4H8 233 aa12.48□□□□□ -0.41
RPAIN-214ENST00000574003 TMC5Q6UXY8 1006 aa12.48□□□□□ -0.41
RPAIN-214ENST00000574003 SPATA31D4Q6ZUB0 917 aa12.48□□□□□ -0.41
RPAIN-214ENST00000574003 HACE1Q8IYU2 909 aa12.48□□□□□ -0.41
RPAIN-214ENST00000574003 RNF168Q8IYW5 571 aaPredicted RBP12.48□□□□□ -0.41
RPAIN-214ENST00000574003 CEP120Q8N960 986 aa12.48□□□□□ -0.41
RPAIN-214ENST00000574003 RSPH1Q8WYR4 309 aa12.48□□□□□ -0.41
RPAIN-214ENST00000574003 KIFAP3Q92845 792 aa12.48□□□□□ -0.41
RPAIN-214ENST00000574003 RPS6KC1Q96S38 1066 aa12.48□□□□□ -0.41
RPAIN-214ENST00000574003 ZSCAN21Q9Y5A6 473 aaPredicted RBP12.48□□□□□ -0.41
RPAIN-214ENST00000574003 IRAK3Q9Y616 596 aa12.48□□□□□ -0.41
RPAIN-214ENST00000574003 DOCK6Q96HP0 2047 aa12.47□□□□□ -0.41
RPAIN-214ENST00000574003 MYH11P35749 1972 aa12.47□□□□□ -0.41
RPAIN-214ENST00000574003 TEX28O15482 410 aa12.47□□□□□ -0.41
RPAIN-214ENST00000574003 URODP06132 367 aa12.47□□□□□ -0.41
RPAIN-214ENST00000574003 HOXB8P17481 243 aaPredicted RBP12.47□□□□□ -0.41
RPAIN-214ENST00000574003 CLCN4P51793 760 aa12.47□□□□□ -0.41
RPAIN-214ENST00000574003 OSTNP61366 133 aa12.47□□□□□ -0.41
RPAIN-214ENST00000574003 GRIK3Q13003 919 aa12.47□□□□□ -0.41
RPAIN-214ENST00000574003 CUL4AQ13619 759 aa12.47□□□□□ -0.41
RPAIN-214ENST00000574003 DHX8Q14562 1220 aaKnown RBP12.47□□□□□ -0.41
RPAIN-214ENST00000574003 TPRNQ4KMQ1 711 aa12.47□□□□□ -0.41
RPAIN-214ENST00000574003 ATF7IP2Q5U623 682 aa12.47□□□□□ -0.41
RPAIN-214ENST00000574003 KIAA0319Q5VV43 1072 aa12.47□□□□□ -0.41
RPAIN-214ENST00000574003 FUT10Q6P4F1 479 aa12.47□□□□□ -0.41
RPAIN-214ENST00000574003 PRSS55Q6UWB4 352 aaPredicted RBP12.47□□□□□ -0.41
RPAIN-214ENST00000574003 ZBTB33Q86T24 672 aa12.47□□□□□ -0.41
RPAIN-214ENST00000574003 TMEM130Q8N3G9 435 aa12.47□□□□□ -0.41
RPAIN-214ENST00000574003 ZBTB45Q96K62 511 aaPredicted RBP12.47□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms