RNA–Protein interactions for RNA: ENST00000572760.5

NPLOC4-209, Transcript of NPL4 homolog, ubiquitin recognition factor, humanhuman

TSL 1 (best) BASIC

Gene NPLOC4, Length 946 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPLOC4-209ENST00000572760 FAM189BP81408 668 aa15.87■□□□□ 0.13
NPLOC4-209ENST00000572760 KNOP1Q1ED39 458 aaKnown RBP15.87■□□□□ 0.13
NPLOC4-209ENST00000572760 SKOR2Q2VWA4 1001 aaPredicted RBP15.87■□□□□ 0.13
NPLOC4-209ENST00000572760 TMCO2Q7Z6W1 182 aaPredicted RBP15.87■□□□□ 0.13
NPLOC4-209ENST00000572760 HERC6Q8IVU3 1022 aa15.87■□□□□ 0.13
NPLOC4-209ENST00000572760 THNSL1Q8IYQ7 743 aa15.87■□□□□ 0.13
NPLOC4-209ENST00000572760 TRIML1Q8N9V2 468 aa15.87■□□□□ 0.13
NPLOC4-209ENST00000572760 MSTO1Q9BUK6 570 aa15.87■□□□□ 0.13
NPLOC4-209ENST00000572760 CCDC94Q9BW85 323 aaPredicted RBP15.87■□□□□ 0.13
NPLOC4-209ENST00000572760 CDT1Q9H211 546 aa15.87■□□□□ 0.13
NPLOC4-209ENST00000572760 PARP2Q9UGN5 583 aa15.87■□□□□ 0.13
NPLOC4-209ENST00000572760 TRIOBPQ9H2D6 2365 aa15.86■□□□□ 0.13
NPLOC4-209ENST00000572760 A0A1W2PPC1 479 aa15.86■□□□□ 0.13
NPLOC4-209ENST00000572760 PROZP22891 400 aa15.86■□□□□ 0.13
NPLOC4-209ENST00000572760 OSTNP61366 133 aa15.86■□□□□ 0.13
NPLOC4-209ENST00000572760 NFKBIBQ15653 356 aa15.86■□□□□ 0.13
NPLOC4-209ENST00000572760 BMT2Q1RMZ1 405 aa15.86■□□□□ 0.13
NPLOC4-209ENST00000572760 CAVIN1Q6NZI2 390 aaKnown RBP15.86■□□□□ 0.13
NPLOC4-209ENST00000572760 ARMCX5Q6P1M9 558 aa15.86■□□□□ 0.13
NPLOC4-209ENST00000572760 MRPL10Q7Z7H8 261 aaKnown RBP15.86■□□□□ 0.13
NPLOC4-209ENST00000572760 SMYD4Q8IYR2 804 aaPredicted RBP15.86■□□□□ 0.13
NPLOC4-209ENST00000572760 GUF1Q8N442 669 aaKnown RBP15.86■□□□□ 0.13
NPLOC4-209ENST00000572760 NOC3LQ8WTT2 800 aaKnown RBP15.86■□□□□ 0.13
NPLOC4-209ENST00000572760 LPPQ93052 612 aa15.86■□□□□ 0.13
NPLOC4-209ENST00000572760 YME1L1Q96TA2 773 aa15.86■□□□□ 0.13
NPLOC4-209ENST00000572760 PRO3102Q9H379 93 aa15.86■□□□□ 0.13
NPLOC4-209ENST00000572760 NXF3Q9H4D5 531 aaKnown RBP15.86■□□□□ 0.13
NPLOC4-209ENST00000572760 PTPRHQ9HD43 1115 aa15.86■□□□□ 0.13
NPLOC4-209ENST00000572760 UBN1Q9NPG3 1134 aa15.86■□□□□ 0.13
NPLOC4-209ENST00000572760 SNTG2Q9NY99 539 aa15.86■□□□□ 0.13
NPLOC4-209ENST00000572760 HES2Q9Y543 173 aa15.86■□□□□ 0.13
NPLOC4-209ENST00000572760 TISP43B9A030 160 aa15.85■□□□□ 0.13
NPLOC4-209ENST00000572760 TULP1O00294 542 aaPredicted RBP15.85■□□□□ 0.13
NPLOC4-209ENST00000572760 TLL1O43897 1013 aa15.85■□□□□ 0.13
NPLOC4-209ENST00000572760 GJB5O95377 273 aa15.85■□□□□ 0.13
NPLOC4-209ENST00000572760 PPP1R2P41236 205 aa15.85■□□□□ 0.13
NPLOC4-209ENST00000572760 YARSP54577 528 aaKnown RBP15.85■□□□□ 0.13
NPLOC4-209ENST00000572760 SNRPFP62306 86 aaKnown RBP15.85■□□□□ 0.13
NPLOC4-209ENST00000572760 MCL1Q07820 350 aa15.85■□□□□ 0.13
NPLOC4-209ENST00000572760 MORC3Q14149 939 aa15.85■□□□□ 0.13
NPLOC4-209ENST00000572760 KYAT1Q16773 422 aa15.85■□□□□ 0.13
NPLOC4-209ENST00000572760 KLHL40Q2TBA0 621 aa15.85■□□□□ 0.13
NPLOC4-209ENST00000572760 SLC39A4Q6P5W5 647 aa15.85■□□□□ 0.13
NPLOC4-209ENST00000572760 GLB1LQ6UWU2 654 aa15.85■□□□□ 0.13
NPLOC4-209ENST00000572760 ZNF598Q86UK7 904 aaKnown RBP15.85■□□□□ 0.13
NPLOC4-209ENST00000572760 SMG8Q8ND04 991 aaKnown RBP15.85■□□□□ 0.13
NPLOC4-209ENST00000572760 GOLGA5Q8TBA6 731 aa15.85■□□□□ 0.13
NPLOC4-209ENST00000572760 IKZF4Q9H2S9 585 aa15.85■□□□□ 0.13
NPLOC4-209ENST00000572760 RSAD1Q9HA92 442 aa15.85■□□□□ 0.13
NPLOC4-209ENST00000572760 CGNQ9P2M7 1197 aaKnown RBP15.85■□□□□ 0.13
NPLOC4-209ENST00000572760 AGO2Q9UKV8 859 aaKnown RBP15.85■□□□□ 0.13
NPLOC4-209ENST00000572760 ANK1P16157 1881 aa15.84■□□□□ 0.13
NPLOC4-209ENST00000572760 PDCD11Q14690 1871 aaKnown RBP15.84■□□□□ 0.13
NPLOC4-209ENST00000572760 NLRC5Q86WI3 1866 aa15.84■□□□□ 0.13
NPLOC4-209ENST00000572760 TBKBP1A7MCY6 615 aa15.84■□□□□ 0.13
NPLOC4-209ENST00000572760 GRXCR1A8MXD5 290 aa15.84■□□□□ 0.13
NPLOC4-209ENST00000572760 CLIC2O15247 247 aa15.84■□□□□ 0.13
NPLOC4-209ENST00000572760 OGTO15294 1046 aa15.84■□□□□ 0.13
NPLOC4-209ENST00000572760 CALUO43852 315 aaPredicted RBP15.84■□□□□ 0.13
NPLOC4-209ENST00000572760 FGFR1P11362 822 aa15.84■□□□□ 0.13
NPLOC4-209ENST00000572760 ATF7P17544 494 aaPredicted RBP15.84■□□□□ 0.13
NPLOC4-209ENST00000572760 GARTP22102 1010 aa15.84■□□□□ 0.13
NPLOC4-209ENST00000572760 AKAP5P24588 427 aa15.84■□□□□ 0.13
NPLOC4-209ENST00000572760 HOXD13P35453 343 aa15.84■□□□□ 0.13
NPLOC4-209ENST00000572760 GRM5P41594 1212 aa15.84■□□□□ 0.13
NPLOC4-209ENST00000572760 PRCPP42785 496 aa15.84■□□□□ 0.13
NPLOC4-209ENST00000572760 PAN2Q504Q3 1202 aaKnown RBP15.84■□□□□ 0.13
NPLOC4-209ENST00000572760 SASS6Q6UVJ0 657 aa15.84■□□□□ 0.13
NPLOC4-209ENST00000572760 CEP120Q8N960 986 aa15.84■□□□□ 0.13
NPLOC4-209ENST00000572760 HELQQ8TDG4 1101 aa15.84■□□□□ 0.13
NPLOC4-209ENST00000572760 ACAP3Q96P50 834 aa15.84■□□□□ 0.13
NPLOC4-209ENST00000572760 RPS6KC1Q96S38 1066 aa15.84■□□□□ 0.13
NPLOC4-209ENST00000572760 TSG101Q99816 390 aa15.84■□□□□ 0.13
NPLOC4-209ENST00000572760 PCIF1Q9H4Z3 704 aa15.84■□□□□ 0.13
NPLOC4-209ENST00000572760 TYW1Q9NV66 732 aaKnown RBP15.84■□□□□ 0.13
NPLOC4-209ENST00000572760 TMEM63CQ9P1W3 806 aa15.84■□□□□ 0.13
NPLOC4-209ENST00000572760 MSRAQ9UJ68 235 aa15.84■□□□□ 0.13
NPLOC4-209ENST00000572760 INPP5FQ9Y2H2 1132 aa15.84■□□□□ 0.13
NPLOC4-209ENST00000572760 INSL6Q9Y581 213 aa15.84■□□□□ 0.13
NPLOC4-209ENST00000572760 RALGAPA2Q2PPJ7 1873 aa15.83■□□□□ 0.12
NPLOC4-209ENST00000572760 A0A0B4J269 797 aa15.83■□□□□ 0.12
NPLOC4-209ENST00000572760 PDXKO00764 312 aa15.83■□□□□ 0.12
NPLOC4-209ENST00000572760 ABLIM1O14639 778 aa15.83■□□□□ 0.12
NPLOC4-209ENST00000572760 PSMA7O14818 248 aa15.83■□□□□ 0.12
NPLOC4-209ENST00000572760 DGKIO75912 1065 aa15.83■□□□□ 0.12
NPLOC4-209ENST00000572760 LDHAP00338 332 aaKnown RBP15.83■□□□□ 0.12
NPLOC4-209ENST00000572760 RABGGTBP53611 331 aa15.83■□□□□ 0.12
NPLOC4-209ENST00000572760 BTG3Q14201 252 aaPredicted RBP15.83■□□□□ 0.12
NPLOC4-209ENST00000572760 RAB30Q15771 203 aa15.83■□□□□ 0.12
NPLOC4-209ENST00000572760 SEZ6Q53EL9 994 aa15.83■□□□□ 0.12
NPLOC4-209ENST00000572760 KLHL10Q6JEL2 608 aa15.83■□□□□ 0.12
NPLOC4-209ENST00000572760 AGMOQ6ZNB7 445 aa15.83■□□□□ 0.12
NPLOC4-209ENST00000572760 URGCPQ8TCY9 931 aa15.83■□□□□ 0.12
NPLOC4-209ENST00000572760 RAD9AQ99638 391 aa15.83■□□□□ 0.12
NPLOC4-209ENST00000572760 CBWD1Q9BRT8 395 aa15.83■□□□□ 0.12
NPLOC4-209ENST00000572760 TMEM117Q9H0C3 514 aa15.83■□□□□ 0.12
NPLOC4-209ENST00000572760 RNF39Q9H2S5 420 aa15.83■□□□□ 0.12
NPLOC4-209ENST00000572760 RPF1Q9H9Y2 349 aaKnown RBP15.83■□□□□ 0.12
NPLOC4-209ENST00000572760 AGPAT3Q9NRZ7 376 aa15.83■□□□□ 0.12
NPLOC4-209ENST00000572760 TOPORSQ9NS56 1045 aaPredicted RBP15.83■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 41.8 ms