RNA–Protein interactions for RNA: ENST00000572750.1

CHD3-215, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

TSL 3

Gene CHD3, Length 750 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-215ENST00000572750 MRPL4Q9BYD3 311 aaKnown RBP17.37■□□□□ 0.37
CHD3-215ENST00000572750 TRIM9Q9C026 710 aa17.37■□□□□ 0.37
CHD3-215ENST00000572750 TMEM117Q9H0C3 514 aa17.37■□□□□ 0.37
CHD3-215ENST00000572750 MAGEF1Q9HAY2 307 aa17.37■□□□□ 0.37
CHD3-215ENST00000572750 SERTAD1Q9UHV2 236 aa17.37■□□□□ 0.37
CHD3-215ENST00000572750 INPP5FQ9Y2H2 1132 aa17.37■□□□□ 0.37
CHD3-215ENST00000572750 PLXNA4Q9HCM2 1894 aa17.36■□□□□ 0.37
CHD3-215ENST00000572750 RFXAPO00287 272 aa17.36■□□□□ 0.37
CHD3-215ENST00000572750 SYKP43405 635 aa17.36■□□□□ 0.37
CHD3-215ENST00000572750 AFMP43652 599 aa17.36■□□□□ 0.37
CHD3-215ENST00000572750 ASIC1P78348 528 aa17.36■□□□□ 0.37
CHD3-215ENST00000572750 EPC2Q52LR7 807 aa17.36■□□□□ 0.37
CHD3-215ENST00000572750 AGMOQ6ZNB7 445 aa17.36■□□□□ 0.37
CHD3-215ENST00000572750 MRPL10Q7Z7H8 261 aaKnown RBP17.36■□□□□ 0.37
CHD3-215ENST00000572750 CEP57L1Q8IYX8 460 aa17.36■□□□□ 0.37
CHD3-215ENST00000572750 LRRC43Q8N309 656 aa17.36■□□□□ 0.37
CHD3-215ENST00000572750 PGBD4Q96DM1 585 aa17.36■□□□□ 0.37
CHD3-215ENST00000572750 PYM1Q9BRP8 204 aaKnown RBP17.36■□□□□ 0.37
CHD3-215ENST00000572750 TARS2Q9BW92 718 aaKnown RBP17.36■□□□□ 0.37
CHD3-215ENST00000572750 BLZF1Q9H2G9 400 aa17.36■□□□□ 0.37
CHD3-215ENST00000572750 RNF39Q9H2S5 420 aa17.36■□□□□ 0.37
CHD3-215ENST00000572750 TBC1D7Q9P0N9 293 aa17.36■□□□□ 0.37
CHD3-215ENST00000572750 ANKFY1Q9P2R3 1169 aa17.36■□□□□ 0.37
CHD3-215ENST00000572750 TDRD15B5MCY1 1934 aaKnown RBP17.36■□□□□ 0.37
CHD3-215ENST00000572750 FAM237AA0A1B0GTK4 181 aa17.35■□□□□ 0.37
CHD3-215ENST00000572750 FRMD3A2A2Y4 597 aa17.35■□□□□ 0.37
CHD3-215ENST00000572750 H0YCG3 227 aa17.35■□□□□ 0.37
CHD3-215ENST00000572750 ITGA4P13612 1032 aa17.35■□□□□ 0.37
CHD3-215ENST00000572750 GAP43P17677 238 aa17.35■□□□□ 0.37
CHD3-215ENST00000572750 MLH1P40692 756 aa17.35■□□□□ 0.37
CHD3-215ENST00000572750 COASYQ13057 564 aa17.35■□□□□ 0.37
CHD3-215ENST00000572750 ZNF568Q3ZCX4 644 aa17.35■□□□□ 0.37
CHD3-215ENST00000572750 ZC2HC1CQ53FD0 456 aaPredicted RBP17.35■□□□□ 0.37
CHD3-215ENST00000572750 GLB1LQ6UWU2 654 aa17.35■□□□□ 0.37
CHD3-215ENST00000572750 LRRC55Q6ZSA7 311 aa17.35■□□□□ 0.37
CHD3-215ENST00000572750 TMEM192Q8IY95 271 aa17.35■□□□□ 0.37
CHD3-215ENST00000572750 FBXO22Q8NEZ5 403 aa17.35■□□□□ 0.37
CHD3-215ENST00000572750 CLP1Q92989 425 aaKnown RBP17.35■□□□□ 0.37
CHD3-215ENST00000572750 ACO2Q99798 780 aaKnown RBP17.35■□□□□ 0.37
CHD3-215ENST00000572750 ADPGKQ9BRR6 497 aa17.35■□□□□ 0.37
CHD3-215ENST00000572750 FGFBP2Q9BYJ0 223 aa17.35■□□□□ 0.37
CHD3-215ENST00000572750 RSAD1Q9HA92 442 aa17.35■□□□□ 0.37
CHD3-215ENST00000572750 PANK4Q9NVE7 773 aa17.35■□□□□ 0.37
CHD3-215ENST00000572750 KCNG1Q9UIX4 513 aa17.35■□□□□ 0.37
CHD3-215ENST00000572750 SLFN14P0C7P3 912 aa17.34■□□□□ 0.37
CHD3-215ENST00000572750 HARSP12081 509 aaKnown RBP17.34■□□□□ 0.37
CHD3-215ENST00000572750 AKAP5P24588 427 aa17.34■□□□□ 0.37
CHD3-215ENST00000572750 AFF1P51825 1210 aaKnown RBP17.34■□□□□ 0.37
CHD3-215ENST00000572750 AMPD3Q01432 767 aa17.34■□□□□ 0.37
CHD3-215ENST00000572750 CUL4BQ13620 913 aa17.34■□□□□ 0.37
CHD3-215ENST00000572750 DCAF4L1Q3SXM0 396 aa17.34■□□□□ 0.37
CHD3-215ENST00000572750 SPOUT1Q5T280 376 aaKnown RBP17.34■□□□□ 0.37
CHD3-215ENST00000572750 CNNM3Q8NE01 707 aa17.34■□□□□ 0.37
CHD3-215ENST00000572750 HPS3Q969F9 1004 aa17.34■□□□□ 0.37
CHD3-215ENST00000572750 BICD1Q96G01 975 aa17.34■□□□□ 0.37
CHD3-215ENST00000572750 ZFP42Q96MM3 310 aa17.34■□□□□ 0.37
CHD3-215ENST00000572750 IPO9Q96P70 1041 aaKnown RBP17.34■□□□□ 0.37
CHD3-215ENST00000572750 LRRC27Q9C0I9 530 aa17.34■□□□□ 0.37
CHD3-215ENST00000572750 CDT1Q9H211 546 aa17.34■□□□□ 0.37
CHD3-215ENST00000572750 MRPL44Q9H9J2 332 aaKnown RBP17.34■□□□□ 0.37
CHD3-215ENST00000572750 TYW1Q9NV66 732 aaKnown RBP17.34■□□□□ 0.37
CHD3-215ENST00000572750 SEL1LQ9UBV2 794 aa17.34■□□□□ 0.37
CHD3-215ENST00000572750 TBX20Q9UMR3 447 aa17.34■□□□□ 0.37
CHD3-215ENST00000572750 TNFSF13BQ9Y275 285 aa17.34■□□□□ 0.37
CHD3-215ENST00000572750 GOLGA6L4A6NEF3 574 aa17.33■□□□□ 0.36
CHD3-215ENST00000572750 PI4K2BG5E9Z4 385 aa17.33■□□□□ 0.36
CHD3-215ENST00000572750 ABLIM1O14639 778 aa17.33■□□□□ 0.36
CHD3-215ENST00000572750 HNRNPDLO14979 420 aaKnown RBP17.33■□□□□ 0.36
CHD3-215ENST00000572750 OFD1O75665 1012 aa17.33■□□□□ 0.36
CHD3-215ENST00000572750 GCNT3O95395 438 aa17.33■□□□□ 0.36
CHD3-215ENST00000572750 PROZP22891 400 aa17.33■□□□□ 0.36
CHD3-215ENST00000572750 PBX3P40426 434 aa17.33■□□□□ 0.36
CHD3-215ENST00000572750 CASP5P51878 434 aa17.33■□□□□ 0.36
CHD3-215ENST00000572750 AAK1Q2M2I8 961 aa17.33■□□□□ 0.36
CHD3-215ENST00000572750 HERC4Q5GLZ8 1057 aaPredicted RBP17.33■□□□□ 0.36
CHD3-215ENST00000572750 NOMO2Q5JPE7 1267 aa17.33■□□□□ 0.36
CHD3-215ENST00000572750 ZBTB33Q86T24 672 aa17.33■□□□□ 0.36
CHD3-215ENST00000572750 CCDC65Q8IXS2 484 aa17.33■□□□□ 0.36
CHD3-215ENST00000572750 HACE1Q8IYU2 909 aa17.33■□□□□ 0.36
CHD3-215ENST00000572750 CEP120Q8N960 986 aa17.33■□□□□ 0.36
CHD3-215ENST00000572750 URGCPQ8TCY9 931 aa17.33■□□□□ 0.36
CHD3-215ENST00000572750 PAGE5Q96GU1 130 aa17.33■□□□□ 0.36
CHD3-215ENST00000572750 SAMD11Q96NU1 681 aa17.33■□□□□ 0.36
CHD3-215ENST00000572750 GAD1Q99259 594 aa17.33■□□□□ 0.36
CHD3-215ENST00000572750 C7orf25Q9BPX7 421 aa17.33■□□□□ 0.36
CHD3-215ENST00000572750 MRPL9Q9BYD2 267 aaKnown RBP17.33■□□□□ 0.36
CHD3-215ENST00000572750 CWH43Q9H720 699 aa17.33■□□□□ 0.36
CHD3-215ENST00000572750 PTPRHQ9HD43 1115 aa17.33■□□□□ 0.36
CHD3-215ENST00000572750 OLFML3Q9NRN5 406 aa17.33■□□□□ 0.36
CHD3-215ENST00000572750 TBC1D13Q9NVG8 400 aa17.33■□□□□ 0.36
CHD3-215ENST00000572750 RWDD3Q9Y3V2 267 aa17.33■□□□□ 0.36
CHD3-215ENST00000572750 ARL5CA6NH57 179 aa17.32■□□□□ 0.36
CHD3-215ENST00000572750 B4GALT3O60512 393 aa17.32■□□□□ 0.36
CHD3-215ENST00000572750 LPXNO60711 386 aa17.32■□□□□ 0.36
CHD3-215ENST00000572750 PPP1R37O75864 691 aa17.32■□□□□ 0.36
CHD3-215ENST00000572750 RECQL4O94761 1208 aa17.32■□□□□ 0.36
CHD3-215ENST00000572750 POMCP01189 267 aa17.32■□□□□ 0.36
CHD3-215ENST00000572750 MYBP10242 640 aa17.32■□□□□ 0.36
CHD3-215ENST00000572750 BMPR1AP36894 532 aa17.32■□□□□ 0.36
CHD3-215ENST00000572750 SCNN1GP51170 649 aa17.32■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms