RNA–Protein interactions for RNA: ENST00000572525.5

CHMP6-203, Transcript of charged multivesicular body protein 6, humanhuman

TSL 3

Gene CHMP6, Length 611 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP6-203ENST00000572525 PROS1P07225 676 aa11.37□□□□□ -0.59
CHMP6-203ENST00000572525 FUT2Q10981 343 aa11.37□□□□□ -0.59
CHMP6-203ENST00000572525 DRP2Q13474 957 aa11.37□□□□□ -0.59
CHMP6-203ENST00000572525 COL9A2Q14055 689 aaPredicted RBP11.37□□□□□ -0.59
CHMP6-203ENST00000572525 TAS1R1Q7RTX1 841 aa11.37□□□□□ -0.59
CHMP6-203ENST00000572525 SRGAP1Q7Z6B7 1085 aa11.37□□□□□ -0.59
CHMP6-203ENST00000572525 FGF13Q92913 245 aa11.37□□□□□ -0.59
CHMP6-203ENST00000572525 LENG9Q96B70 501 aa11.37□□□□□ -0.59
CHMP6-203ENST00000572525 CCDC51Q96ER9 411 aa11.37□□□□□ -0.59
CHMP6-203ENST00000572525 IFT122Q9HBG6 1241 aa11.37□□□□□ -0.59
CHMP6-203ENST00000572525 FAM217BQ9NTX9 383 aaPredicted RBP11.37□□□□□ -0.59
CHMP6-203ENST00000572525 PPME1Q9Y570 386 aa11.37□□□□□ -0.59
CHMP6-203ENST00000572525 DYNC1LI1Q9Y6G9 523 aaKnown RBP11.37□□□□□ -0.59
CHMP6-203ENST00000572525 LOC105378220A0A1B0GUY1 285 aaPredicted RBP11.36□□□□□ -0.59
CHMP6-203ENST00000572525 MAN2B1O00754 1011 aa11.36□□□□□ -0.59
CHMP6-203ENST00000572525 XYLBO75191 536 aa11.36□□□□□ -0.59
CHMP6-203ENST00000572525 ECI2O75521 394 aa11.36□□□□□ -0.59
CHMP6-203ENST00000572525 PAPSS2O95340 614 aaPredicted RBP11.36□□□□□ -0.59
CHMP6-203ENST00000572525 RXRAP19793 462 aa11.36□□□□□ -0.59
CHMP6-203ENST00000572525 CCR3P51677 355 aa11.36□□□□□ -0.59
CHMP6-203ENST00000572525 AFF1P51825 1210 aaKnown RBP11.36□□□□□ -0.59
CHMP6-203ENST00000572525 RCAN1P53805 252 aa11.36□□□□□ -0.59
CHMP6-203ENST00000572525 MTAPQ13126 283 aa11.36□□□□□ -0.59
CHMP6-203ENST00000572525 TPRG1Q6ZUI0 275 aa11.36□□□□□ -0.59
CHMP6-203ENST00000572525 TRMT1LQ7Z2T5 733 aaKnown RBP11.36□□□□□ -0.59
CHMP6-203ENST00000572525 EXOC8Q8IYI6 725 aa11.36□□□□□ -0.59
CHMP6-203ENST00000572525 ZNF687Q8N1G0 1237 aa11.36□□□□□ -0.59
CHMP6-203ENST00000572525 CCDC82Q8N4S0 544 aa11.36□□□□□ -0.59
CHMP6-203ENST00000572525 COLEC11Q9BWP8 271 aa11.36□□□□□ -0.59
CHMP6-203ENST00000572525 ZMYND12Q9H0C1 365 aa11.36□□□□□ -0.59
CHMP6-203ENST00000572525 RWDD1Q9H446 243 aaPredicted RBP11.36□□□□□ -0.59
CHMP6-203ENST00000572525 AVENQ9NQS1 362 aaPredicted RBP11.36□□□□□ -0.59
CHMP6-203ENST00000572525 SH2B1Q9NRF2 756 aaPredicted RBP11.36□□□□□ -0.59
CHMP6-203ENST00000572525 PRG3Q9Y2Y8 225 aaPredicted RBP11.36□□□□□ -0.59
CHMP6-203ENST00000572525 NUP205Q92621 2012 aa11.36□□□□□ -0.59
CHMP6-203ENST00000572525 SHISA7A6NL88 538 aa11.35□□□□□ -0.59
CHMP6-203ENST00000572525 TM4SF5O14894 197 aa11.35□□□□□ -0.59
CHMP6-203ENST00000572525 SGSM2O43147 1006 aa11.35□□□□□ -0.59
CHMP6-203ENST00000572525 POMCP01189 267 aa11.35□□□□□ -0.59
CHMP6-203ENST00000572525 AXLP30530 894 aa11.35□□□□□ -0.59
CHMP6-203ENST00000572525 HOXA11P31270 313 aaPredicted RBP11.35□□□□□ -0.59
CHMP6-203ENST00000572525 OR1G1P47890 313 aa11.35□□□□□ -0.59
CHMP6-203ENST00000572525 UGCGQ16739 394 aa11.35□□□□□ -0.59
CHMP6-203ENST00000572525 UVSSAQ2YD98 709 aa11.35□□□□□ -0.59
CHMP6-203ENST00000572525 LONRF3Q496Y0 759 aa11.35□□□□□ -0.59
CHMP6-203ENST00000572525 UBXN11Q5T124 520 aa11.35□□□□□ -0.59
CHMP6-203ENST00000572525 LIN9Q5TKA1 542 aa11.35□□□□□ -0.59
CHMP6-203ENST00000572525 FUT10Q6P4F1 479 aa11.35□□□□□ -0.59
CHMP6-203ENST00000572525 PDXDC1Q6P996 788 aa11.35□□□□□ -0.59
CHMP6-203ENST00000572525 APOA5Q6Q788 366 aa11.35□□□□□ -0.59
CHMP6-203ENST00000572525 GRASPQ7Z6J2 395 aaPredicted RBP11.35□□□□□ -0.59
CHMP6-203ENST00000572525 MICU3Q86XE3 530 aa11.35□□□□□ -0.59
CHMP6-203ENST00000572525 PALB2Q86YC2 1186 aa11.35□□□□□ -0.59
CHMP6-203ENST00000572525 RHPN2Q8IUC4 686 aa11.35□□□□□ -0.59
CHMP6-203ENST00000572525 REXO1Q8N1G1 1221 aaKnown RBP11.35□□□□□ -0.59
CHMP6-203ENST00000572525 EXOC6Q8TAG9 804 aa11.35□□□□□ -0.59
CHMP6-203ENST00000572525 CCDC12Q8WUD4 166 aaPredicted RBP11.35□□□□□ -0.59
CHMP6-203ENST00000572525 IPO9Q96P70 1041 aaKnown RBP11.35□□□□□ -0.59
CHMP6-203ENST00000572525 TRPV5Q9NQA5 729 aa11.35□□□□□ -0.59
CHMP6-203ENST00000572525 GDE1Q9NZC3 331 aa11.35□□□□□ -0.59
CHMP6-203ENST00000572525 SUCLA2Q9P2R7 463 aaPredicted RBP11.35□□□□□ -0.59
CHMP6-203ENST00000572525 ADAM28Q9UKQ2 775 aa11.35□□□□□ -0.59
CHMP6-203ENST00000572525 FLNBO75369 2602 aaKnown RBP11.35□□□□□ -0.59
CHMP6-203ENST00000572525 WDFY3Q8IZQ1 3526 aa11.34□□□□□ -0.59
CHMP6-203ENST00000572525 ARL5CA6NH57 179 aa11.34□□□□□ -0.59
CHMP6-203ENST00000572525 STBD1O95210 358 aa11.34□□□□□ -0.59
CHMP6-203ENST00000572525 SPATA31D3P0C874 917 aa11.34□□□□□ -0.59
CHMP6-203ENST00000572525 ITGA4P13612 1032 aa11.34□□□□□ -0.59
CHMP6-203ENST00000572525 CHMLP26374 656 aa11.34□□□□□ -0.59
CHMP6-203ENST00000572525 MLLT6P55198 1093 aaPredicted RBP11.34□□□□□ -0.59
CHMP6-203ENST00000572525 COL9A3Q14050 684 aaPredicted RBP11.34□□□□□ -0.59
CHMP6-203ENST00000572525 MTERF2Q49AM1 385 aa11.34□□□□□ -0.59
CHMP6-203ENST00000572525 PRR16Q569H4 304 aa11.34□□□□□ -0.59
CHMP6-203ENST00000572525 JAKMIP3Q5VZ66 844 aa11.34□□□□□ -0.59
CHMP6-203ENST00000572525 TSSK4Q6SA08 328 aa11.34□□□□□ -0.59
CHMP6-203ENST00000572525 B3GNT9Q6UX72 402 aa11.34□□□□□ -0.59
CHMP6-203ENST00000572525 SYNE3Q6ZMZ3 975 aa11.34□□□□□ -0.59
CHMP6-203ENST00000572525 SPATA31D4Q6ZUB0 917 aa11.34□□□□□ -0.59
CHMP6-203ENST00000572525 NPAS3Q8IXF0 933 aa11.34□□□□□ -0.59
CHMP6-203ENST00000572525 SMG8Q8ND04 991 aaKnown RBP11.34□□□□□ -0.59
CHMP6-203ENST00000572525 PIK3R5Q8WYR1 880 aa11.34□□□□□ -0.59
CHMP6-203ENST00000572525 SLC5A5Q92911 643 aa11.34□□□□□ -0.59
CHMP6-203ENST00000572525 TEKT3Q9BXF9 490 aa11.34□□□□□ -0.59
CHMP6-203ENST00000572525 GPR62Q9BZJ7 368 aa11.34□□□□□ -0.59
CHMP6-203ENST00000572525 SEPT9Q9UHD8 586 aaPredicted RBP11.34□□□□□ -0.59
CHMP6-203ENST00000572525 GIT1Q9Y2X7 761 aa11.34□□□□□ -0.59
CHMP6-203ENST00000572525 COL4A3BPQ9Y5P4 624 aa11.34□□□□□ -0.59
CHMP6-203ENST00000572525 RBM8AQ9Y5S9 174 aaKnown RBP11.34□□□□□ -0.59
CHMP6-203ENST00000572525 NUP210Q8TEM1 1887 aaPredicted RBP11.34□□□□□ -0.59
CHMP6-203ENST00000572525 SF3B1O75533 1304 aaKnown RBP eCLIP11.34□□□□□ -0.59
CHMP6-203ENST00000572525 HELZ2Q9BYK8 2649 aaKnown RBP11.33□□□□□ -0.6
CHMP6-203ENST00000572525 ASH1LQ9NR48 2969 aaKnown RBP11.33□□□□□ -0.6
CHMP6-203ENST00000572525 TMEM8BA6NDV4 472 aa11.33□□□□□ -0.6
CHMP6-203ENST00000572525 GAS7O60861 476 aa11.33□□□□□ -0.6
CHMP6-203ENST00000572525 C8AP07357 584 aa11.33□□□□□ -0.6
CHMP6-203ENST00000572525 CD72P21854 359 aa11.33□□□□□ -0.6
CHMP6-203ENST00000572525 GNA11P29992 359 aa11.33□□□□□ -0.6
CHMP6-203ENST00000572525 HOXA6P31267 233 aa11.33□□□□□ -0.6
CHMP6-203ENST00000572525 PFKFB3Q16875 520 aaPredicted RBP11.33□□□□□ -0.6
CHMP6-203ENST00000572525 PPM1LQ5SGD2 360 aa11.33□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms