RNA–Protein interactions for RNA: ENST00000572019.1

NUP88-203, Transcript of nucleoporin 88, humanhuman

TSL 2

Gene NUP88, Length 580 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP88-203ENST00000572019 AKAP5P24588 427 aa21.38■■□□□ 1.01
NUP88-203ENST00000572019 PTENP60484 403 aa21.38■■□□□ 1.01
NUP88-203ENST00000572019 XKR9Q5GH70 373 aa21.38■■□□□ 1.01
NUP88-203ENST00000572019 NCAPH2Q6IBW4 605 aa21.38■■□□□ 1.01
NUP88-203ENST00000572019 GET4Q7L5D6 327 aaPredicted RBP21.38■■□□□ 1.01
NUP88-203ENST00000572019 KRT25Q7Z3Z0 450 aa21.38■■□□□ 1.01
NUP88-203ENST00000572019 FAM20AQ96MK3 541 aa21.38■■□□□ 1.01
NUP88-203ENST00000572019 PAAF1Q9BRP4 392 aa21.38■■□□□ 1.01
NUP88-203ENST00000572019 PHF20Q9BVI0 1012 aa21.38■■□□□ 1.01
NUP88-203ENST00000572019 RHOBTB2Q9BYZ6 727 aa21.38■■□□□ 1.01
NUP88-203ENST00000572019 KLK14Q9P0G3 267 aa21.38■■□□□ 1.01
NUP88-203ENST00000572019 CEP250Q9BV73 2442 aa21.38■■□□□ 1.01
NUP88-203ENST00000572019 GPR179Q6PRD1 2367 aa21.38■■□□□ 1.01
NUP88-203ENST00000572019 PATJQ8NI35 1801 aa21.37■■□□□ 1.01
NUP88-203ENST00000572019 A0A087WWV3 80 aa21.37■■□□□ 1.01
NUP88-203ENST00000572019 POTEMA6NI47 508 aa21.37■■□□□ 1.01
NUP88-203ENST00000572019 ERLIN2O94905 339 aa21.37■■□□□ 1.01
NUP88-203ENST00000572019 GLULP15104 373 aa21.37■■□□□ 1.01
NUP88-203ENST00000572019 ARF4P18085 180 aaPredicted RBP21.37■■□□□ 1.01
NUP88-203ENST00000572019 PSMA5P28066 241 aa21.37■■□□□ 1.01
NUP88-203ENST00000572019 MBTD1Q05BQ5 628 aa21.37■■□□□ 1.01
NUP88-203ENST00000572019 HTR4Q13639 388 aa21.37■■□□□ 1.01
NUP88-203ENST00000572019 EPHA7Q15375 998 aa21.37■■□□□ 1.01
NUP88-203ENST00000572019 FUT10Q6P4F1 479 aa21.37■■□□□ 1.01
NUP88-203ENST00000572019 LILRA6Q6PI73 481 aa21.37■■□□□ 1.01
NUP88-203ENST00000572019 NEK8Q86SG6 692 aa21.37■■□□□ 1.01
NUP88-203ENST00000572019 RMDN1Q96DB5 314 aa21.37■■□□□ 1.01
NUP88-203ENST00000572019 MTRQ99707 1265 aa21.37■■□□□ 1.01
NUP88-203ENST00000572019 FOXQ1Q9C009 403 aa21.37■■□□□ 1.01
NUP88-203ENST00000572019 CSRNP2Q9H175 543 aa21.37■■□□□ 1.01
NUP88-203ENST00000572019 CXCL16Q9H2A7 254 aa21.37■■□□□ 1.01
NUP88-203ENST00000572019 STK39Q9UEW8 545 aa21.37■■□□□ 1.01
NUP88-203ENST00000572019 FRYLO94915 3013 aa21.37■■□□□ 1.01
NUP88-203ENST00000572019 TRIP11Q15643 1979 aa21.37■■□□□ 1.01
NUP88-203ENST00000572019 ANHXE9PGG2 379 aa21.36■■□□□ 1.01
NUP88-203ENST00000572019 INO80B-WBP1J3KQ70 363 aa21.36■■□□□ 1.01
NUP88-203ENST00000572019 CPLX1O14810 134 aa21.36■■□□□ 1.01
NUP88-203ENST00000572019 GAS2O43903 313 aaKnown RBP21.36■■□□□ 1.01
NUP88-203ENST00000572019 CCNT1O60563 726 aaKnown RBP21.36■■□□□ 1.01
NUP88-203ENST00000572019 LAMP2P13473 410 aa21.36■■□□□ 1.01
NUP88-203ENST00000572019 NTHL1P78549 312 aa21.36■■□□□ 1.01
NUP88-203ENST00000572019 CAPSQ13938 189 aa21.36■■□□□ 1.01
NUP88-203ENST00000572019 PPP4R3AQ6IN85 833 aa21.36■■□□□ 1.01
NUP88-203ENST00000572019 NOTUMQ6P988 496 aa21.36■■□□□ 1.01
NUP88-203ENST00000572019 PRSS55Q6UWB4 352 aaPredicted RBP21.36■■□□□ 1.01
NUP88-203ENST00000572019 PIK3AP1Q6ZUJ8 805 aa21.36■■□□□ 1.01
NUP88-203ENST00000572019 ERMP1Q7Z2K6 904 aa21.36■■□□□ 1.01
NUP88-203ENST00000572019 NUMBLQ9Y6R0 609 aa21.36■■□□□ 1.01
NUP88-203ENST00000572019 MED19A0JLT2 244 aaPredicted RBP21.35■■□□□ 1.01
NUP88-203ENST00000572019 GALNT17Q6IS24 598 aa21.35■■□□□ 1.01
NUP88-203ENST00000572019 CNNM3Q8NE01 707 aa21.35■■□□□ 1.01
NUP88-203ENST00000572019 KCNG4Q8TDN1 519 aa21.35■■□□□ 1.01
NUP88-203ENST00000572019 TCP11Q8WWU5 503 aa21.35■■□□□ 1.01
NUP88-203ENST00000572019 STAMQ92783 540 aa21.35■■□□□ 1.01
NUP88-203ENST00000572019 ZNF274Q96GC6 653 aaPredicted RBP21.35■■□□□ 1.01
NUP88-203ENST00000572019 PIDD1Q9HB75 910 aa21.35■■□□□ 1.01
NUP88-203ENST00000572019 UBN1Q9NPG3 1134 aa21.35■■□□□ 1.01
NUP88-203ENST00000572019 ARHGEF3Q9NR81 526 aa21.35■■□□□ 1.01
NUP88-203ENST00000572019 SSX2IPQ9Y2D8 614 aa21.35■■□□□ 1.01
NUP88-203ENST00000572019 CCDC194A0A1B0GVG4 234 aa21.34■■□□□ 1.01
NUP88-203ENST00000572019 WNT7AO00755 349 aa21.34■■□□□ 1.01
NUP88-203ENST00000572019 ASAP2O43150 1006 aa21.34■■□□□ 1.01
NUP88-203ENST00000572019 SLITRK3O94933 977 aa21.34■■□□□ 1.01
NUP88-203ENST00000572019 LMNAP02545 664 aaKnown RBP21.34■■□□□ 1.01
NUP88-203ENST00000572019 GLRA2P23416 452 aa21.34■■□□□ 1.01
NUP88-203ENST00000572019 SCRN1Q12765 414 aa21.34■■□□□ 1.01
NUP88-203ENST00000572019 RTP2Q5QGT7 225 aa21.34■■□□□ 1.01
NUP88-203ENST00000572019 CYP26C1Q6V0L0 522 aa21.34■■□□□ 1.01
NUP88-203ENST00000572019 IFNLR1Q8IU57 520 aaPredicted RBP21.34■■□□□ 1.01
NUP88-203ENST00000572019 TPH2Q8IWU9 490 aa21.34■■□□□ 1.01
NUP88-203ENST00000572019 KIAA2013Q8IYS2 634 aa21.34■■□□□ 1.01
NUP88-203ENST00000572019 DCLK2Q8N568 766 aa21.34■■□□□ 1.01
NUP88-203ENST00000572019 HASPINQ8TF76 798 aa21.34■■□□□ 1.01
NUP88-203ENST00000572019 PRKD2Q9BZL6 878 aa21.34■■□□□ 1.01
NUP88-203ENST00000572019 PPME1Q9Y570 386 aa21.34■■□□□ 1.01
NUP88-203ENST00000572019 TTLL13PA6NNM8 815 aa21.33■■□□□ 1.01
NUP88-203ENST00000572019 ADAM12O43184 909 aa21.33■■□□□ 1.01
NUP88-203ENST00000572019 DKC1O60832 514 aaKnown RBP eCLIP21.33■■□□□ 1.01
NUP88-203ENST00000572019 NPTXRO95502 500 aa21.33■■□□□ 1.01
NUP88-203ENST00000572019 SP9P0CG40 484 aa21.33■■□□□ 1.01
NUP88-203ENST00000572019 IGFBP6P24592 240 aaPredicted RBP21.33■■□□□ 1.01
NUP88-203ENST00000572019 ARL2P36404 184 aa21.33■■□□□ 1.01
NUP88-203ENST00000572019 PARM1Q6UWI2 310 aa21.33■■□□□ 1.01
NUP88-203ENST00000572019 MAML2Q8IZL2 1156 aaPredicted RBP21.33■■□□□ 1.01
NUP88-203ENST00000572019 FGF14Q92915 247 aa21.33■■□□□ 1.01
NUP88-203ENST00000572019 COLEC11Q9BWP8 271 aa21.33■■□□□ 1.01
NUP88-203ENST00000572019 ZSWIM4Q9H7M6 989 aa21.33■■□□□ 1.01
NUP88-203ENST00000572019 ADAM28Q9UKQ2 775 aa21.33■■□□□ 1.01
NUP88-203ENST00000572019 GIT1Q9Y2X7 761 aa21.33■■□□□ 1.01
NUP88-203ENST00000572019 ZMYND10O75800 440 aa21.32■■□□□ 1
NUP88-203ENST00000572019 GCFC2P16383 781 aaKnown RBP21.32■■□□□ 1
NUP88-203ENST00000572019 RFX1P22670 979 aa21.32■■□□□ 1
NUP88-203ENST00000572019 AXLP30530 894 aa21.32■■□□□ 1
NUP88-203ENST00000572019 PHLDB3Q6NSJ2 640 aa21.32■■□□□ 1
NUP88-203ENST00000572019 OTUD6AQ7L8S5 288 aa21.32■■□□□ 1
NUP88-203ENST00000572019 GRASPQ7Z6J2 395 aaPredicted RBP21.32■■□□□ 1
NUP88-203ENST00000572019 HDAC7Q8WUI4 952 aa21.32■■□□□ 1
NUP88-203ENST00000572019 CCDC51Q96ER9 411 aa21.32■■□□□ 1
NUP88-203ENST00000572019 PLEKHA4Q9H4M7 779 aa21.32■■□□□ 1
NUP88-203ENST00000572019 ZDHHC7Q9NXF8 308 aa21.32■■□□□ 1
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms