RNA–Protein interactions for RNA: ENST00000571806.1

TSR1-202, Transcript of TSR1, ribosome maturation factor, humanhuman

TSL 2

Gene TSR1, Length 794 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSR1-202ENST00000571806 CAPSQ13938 189 aa17.25■□□□□ 0.35
TSR1-202ENST00000571806 AMHR2Q16671 573 aa17.25■□□□□ 0.35
TSR1-202ENST00000571806 USP41Q3LFD5 358 aa17.25■□□□□ 0.35
TSR1-202ENST00000571806 CPB2Q96IY4 423 aa17.25■□□□□ 0.35
TSR1-202ENST00000571806 RNF39Q9H2S5 420 aa17.25■□□□□ 0.35
TSR1-202ENST00000571806 FNIP2Q9P278 1114 aa17.25■□□□□ 0.35
TSR1-202ENST00000571806 DUSP12Q9UNI6 340 aa17.25■□□□□ 0.35
TSR1-202ENST00000571806 TDRD15B5MCY1 1934 aaKnown RBP17.25■□□□□ 0.35
TSR1-202ENST00000571806 NBL1P41271 181 aa17.24■□□□□ 0.35
TSR1-202ENST00000571806 TXKP42681 527 aa17.24■□□□□ 0.35
TSR1-202ENST00000571806 GRIK3Q13003 919 aa17.24■□□□□ 0.35
TSR1-202ENST00000571806 TAS1R1Q7RTX1 841 aa17.24■□□□□ 0.35
TSR1-202ENST00000571806 MCPH1Q8NEM0 835 aa17.24■□□□□ 0.35
TSR1-202ENST00000571806 GTF3C6Q969F1 213 aa17.24■□□□□ 0.35
TSR1-202ENST00000571806 MTMR9Q96QG7 549 aa17.24■□□□□ 0.35
TSR1-202ENST00000571806 RTP3Q9BQQ7 232 aa17.24■□□□□ 0.35
TSR1-202ENST00000571806 SMOC2Q9H3U7 446 aa17.24■□□□□ 0.35
TSR1-202ENST00000571806 FAM86C1Q9NVL1 165 aa17.24■□□□□ 0.35
TSR1-202ENST00000571806 ZDHHC7Q9NXF8 308 aa17.24■□□□□ 0.35
TSR1-202ENST00000571806 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP17.24■□□□□ 0.35
TSR1-202ENST00000571806 HES2Q9Y543 173 aa17.24■□□□□ 0.35
TSR1-202ENST00000571806 GLRA2P23416 452 aa17.23■□□□□ 0.35
TSR1-202ENST00000571806 PPP4R3CPQ6ZMV5 832 aa17.23■□□□□ 0.35
TSR1-202ENST00000571806 ASAP3Q8TDY4 903 aa17.23■□□□□ 0.35
TSR1-202ENST00000571806 ZFP42Q96MM3 310 aa17.23■□□□□ 0.35
TSR1-202ENST00000571806 NXF3Q9H4D5 531 aaKnown RBP17.23■□□□□ 0.35
TSR1-202ENST00000571806 TUFT1Q9NNX1 390 aa17.23■□□□□ 0.35
TSR1-202ENST00000571806 PRMT7Q9NVM4 692 aaPredicted RBP17.23■□□□□ 0.35
TSR1-202ENST00000571806 MIOSQ9NXC5 875 aa17.23■□□□□ 0.35
TSR1-202ENST00000571806 EPS15L1Q9UBC2 864 aa17.23■□□□□ 0.35
TSR1-202ENST00000571806 WNT16Q9UBV4 365 aa17.23■□□□□ 0.35
TSR1-202ENST00000571806 ADAM28Q9UKQ2 775 aa17.23■□□□□ 0.35
TSR1-202ENST00000571806 FBXL21Q9UKT6 434 aa17.23■□□□□ 0.35
TSR1-202ENST00000571806 CLUHO75153 1309 aa17.22■□□□□ 0.35
TSR1-202ENST00000571806 C2orf16Q68DN1 1984 aa17.22■□□□□ 0.35
TSR1-202ENST00000571806 FAM205CA6NFA0 338 aa17.22■□□□□ 0.35
TSR1-202ENST00000571806 BTBD18B2RXH4 712 aa17.22■□□□□ 0.35
TSR1-202ENST00000571806 AOC1P19801 751 aa17.22■□□□□ 0.35
TSR1-202ENST00000571806 GBP2P32456 591 aaPredicted RBP17.22■□□□□ 0.35
TSR1-202ENST00000571806 ME3Q16798 604 aa17.22■□□□□ 0.35
TSR1-202ENST00000571806 FAM187BQ17R55 369 aa17.22■□□□□ 0.35
TSR1-202ENST00000571806 FUT10Q6P4F1 479 aa17.22■□□□□ 0.35
TSR1-202ENST00000571806 ZBTB8OSQ8IWT0 167 aa17.22■□□□□ 0.35
TSR1-202ENST00000571806 DIS3L2Q8IYB7 885 aaKnown RBP17.22■□□□□ 0.35
TSR1-202ENST00000571806 GSTCDQ8NEC7 633 aa17.22■□□□□ 0.35
TSR1-202ENST00000571806 FLCNQ8NFG4 579 aa17.22■□□□□ 0.35
TSR1-202ENST00000571806 PIGOQ8TEQ8 1089 aa17.22■□□□□ 0.35
TSR1-202ENST00000571806 SMG7Q92540 1137 aaKnown RBP17.22■□□□□ 0.35
TSR1-202ENST00000571806 NACC1Q96RE7 527 aa17.22■□□□□ 0.35
TSR1-202ENST00000571806 APOL6Q9BWW8 343 aa17.22■□□□□ 0.35
TSR1-202ENST00000571806 POLR3FQ9H1D9 316 aaPredicted RBP17.22■□□□□ 0.35
TSR1-202ENST00000571806 C2orf40Q9H1Z8 148 aa17.22■□□□□ 0.35
TSR1-202ENST00000571806 PIDD1Q9HB75 910 aa17.22■□□□□ 0.35
TSR1-202ENST00000571806 TADA2AO75478 443 aa17.21■□□□□ 0.35
TSR1-202ENST00000571806 NPTXRO95502 500 aa17.21■□□□□ 0.35
TSR1-202ENST00000571806 AKAP5P24588 427 aa17.21■□□□□ 0.35
TSR1-202ENST00000571806 ORC2Q13416 577 aaPredicted RBP17.21■□□□□ 0.35
TSR1-202ENST00000571806 SAFBQ15424 915 aaKnown RBP eCLIP17.21■□□□□ 0.35
TSR1-202ENST00000571806 NSUN7Q8NE18 718 aaKnown RBP17.21■□□□□ 0.35
TSR1-202ENST00000571806 NT5C3AQ9H0P0 336 aa17.21■□□□□ 0.35
TSR1-202ENST00000571806 PARP2Q9UGN5 583 aa17.21■□□□□ 0.35
TSR1-202ENST00000571806 ZFP37Q9Y6Q3 630 aaPredicted RBP17.21■□□□□ 0.35
TSR1-202ENST00000571806 SF3B1O75533 1304 aaKnown RBP eCLIP17.21■□□□□ 0.346e-8■■■■■ 80.2
TSR1-202ENST00000571806 LRRIQ4A6NIV6 560 aa17.2■□□□□ 0.34
TSR1-202ENST00000571806 B4GALT5O43286 388 aa17.2■□□□□ 0.34
TSR1-202ENST00000571806 TGM5O43548 720 aa17.2■□□□□ 0.34
TSR1-202ENST00000571806 USO1O60763 962 aaKnown RBP17.2■□□□□ 0.34
TSR1-202ENST00000571806 ATP2B1P20020 1258 aa17.2■□□□□ 0.34
TSR1-202ENST00000571806 MUTP22033 750 aa17.2■□□□□ 0.34
TSR1-202ENST00000571806 HSP90AA2PQ14568 343 aaPredicted RBP17.2■□□□□ 0.34
TSR1-202ENST00000571806 CDCA2Q69YH5 1023 aaPredicted RBP17.2■□□□□ 0.34
TSR1-202ENST00000571806 PDXDC1Q6P996 788 aa17.2■□□□□ 0.34
TSR1-202ENST00000571806 LILRA6Q6PI73 481 aa17.2■□□□□ 0.34
TSR1-202ENST00000571806 PALB2Q86YC2 1186 aa17.2■□□□□ 0.34
TSR1-202ENST00000571806 SIX5Q8N196 739 aa17.2■□□□□ 0.34
TSR1-202ENST00000571806 NECAB1Q8N987 351 aa17.2■□□□□ 0.34
TSR1-202ENST00000571806 ERMNQ8TAM6 284 aa17.2■□□□□ 0.34
TSR1-202ENST00000571806 ADPGKQ9BRR6 497 aa17.2■□□□□ 0.34
TSR1-202ENST00000571806 POLR3CQ9BUI4 534 aaPredicted RBP17.2■□□□□ 0.34
TSR1-202ENST00000571806 GPR62Q9BZJ7 368 aa17.2■□□□□ 0.34
TSR1-202ENST00000571806 PRKD2Q9BZL6 878 aa17.2■□□□□ 0.34
TSR1-202ENST00000571806 FZD8Q9H461 694 aa17.2■□□□□ 0.34
TSR1-202ENST00000571806 PLXNA3P51805 1871 aa17.2■□□□□ 0.34
TSR1-202ENST00000571806 MTCL1Q9Y4B5 1905 aaKnown RBP17.19■□□□□ 0.34
TSR1-202ENST00000571806 N4BP3O15049 544 aa17.19■□□□□ 0.34
TSR1-202ENST00000571806 NEFLP07196 543 aa17.19■□□□□ 0.34
TSR1-202ENST00000571806 SPATA31C1P0DKV0 1188 aa17.19■□□□□ 0.34
TSR1-202ENST00000571806 NPR3P17342 541 aa17.19■□□□□ 0.34
TSR1-202ENST00000571806 ELAVL2Q12926 359 aaKnown RBP17.19■□□□□ 0.34
TSR1-202ENST00000571806 TUSC3Q13454 348 aa17.19■□□□□ 0.34
TSR1-202ENST00000571806 MAPK6Q16659 721 aa17.19■□□□□ 0.34
TSR1-202ENST00000571806 CWF19L1Q69YN2 538 aaKnown RBP17.19■□□□□ 0.34
TSR1-202ENST00000571806 CATSPER3Q86XQ3 398 aa17.19■□□□□ 0.34
TSR1-202ENST00000571806 CCDC105Q8IYK2 499 aa17.19■□□□□ 0.34
TSR1-202ENST00000571806 SLC44A3Q8N4M1 653 aa17.19■□□□□ 0.34
TSR1-202ENST00000571806 RIN2Q8WYP3 895 aaPredicted RBP17.19■□□□□ 0.34
TSR1-202ENST00000571806 NKD2Q969F2 451 aaPredicted RBP17.19■□□□□ 0.34
TSR1-202ENST00000571806 ZNF707Q96C28 371 aaPredicted RBP17.19■□□□□ 0.34
TSR1-202ENST00000571806 POTEMA6NI47 508 aa17.18■□□□□ 0.34
TSR1-202ENST00000571806 N4BP1O75113 896 aaKnown RBP17.18■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 532.6 ms