RNA–Protein interactions for RNA: ENST00000571558.5

RPAIN-209, Transcript of RPA interacting protein, humanhuman

TSL 2

Gene RPAIN, Length 1,423 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAIN-209ENST00000571558 DDX12PQ92771 950 aa15.17■□□□□ 0.02
RPAIN-209ENST00000571558 LRRC27Q9C0I9 530 aa15.17■□□□□ 0.02
RPAIN-209ENST00000571558 TMX1Q9H3N1 280 aa15.17■□□□□ 0.02
RPAIN-209ENST00000571558 ELAC1Q9H777 363 aaKnown RBP15.17■□□□□ 0.02
RPAIN-209ENST00000571558 CYP26B1Q9NR63 512 aa15.17■□□□□ 0.02
RPAIN-209ENST00000571558 NRBP2Q9NSY0 501 aa15.17■□□□□ 0.02
RPAIN-209ENST00000571558 KCND2Q9NZV8 630 aa15.17■□□□□ 0.02
RPAIN-209ENST00000571558 SEPT9Q9UHD8 586 aaPredicted RBP15.17■□□□□ 0.02
RPAIN-209ENST00000571558 PCDHA5Q9Y5H7 936 aa15.17■□□□□ 0.02
RPAIN-209ENST00000571558 WDR87Q6ZQQ6 2873 aa15.16■□□□□ 0.02
RPAIN-209ENST00000571558 KIAA1671Q9BY89 1806 aa15.16■□□□□ 0.02
RPAIN-209ENST00000571558 NPHP3-ACAD11A0A0J9YXS1 232 aa15.16■□□□□ 0.02
RPAIN-209ENST00000571558 ARHGEF35A5YM69 484 aa15.16■□□□□ 0.02
RPAIN-209ENST00000571558 GPR182O15218 404 aa15.16■□□□□ 0.02
RPAIN-209ENST00000571558 LETM1O95202 739 aaPredicted RBP15.16■□□□□ 0.02
RPAIN-209ENST00000571558 PDGFBP01127 241 aaPredicted RBP15.16■□□□□ 0.02
RPAIN-209ENST00000571558 GUCY2CP25092 1073 aa15.16■□□□□ 0.02
RPAIN-209ENST00000571558 PPM1AP35813 382 aa15.16■□□□□ 0.02
RPAIN-209ENST00000571558 RBM10P98175 930 aaKnown RBP15.16■□□□□ 0.02
RPAIN-209ENST00000571558 NFX1Q12986 1120 aaKnown RBP15.16■□□□□ 0.02
RPAIN-209ENST00000571558 XKR9Q5GH70 373 aa15.16■□□□□ 0.02
RPAIN-209ENST00000571558 ASTLQ6HA08 431 aaPredicted RBP15.16■□□□□ 0.02
RPAIN-209ENST00000571558 PADI6Q6TGC4 694 aa15.16■□□□□ 0.02
RPAIN-209ENST00000571558 COLGALT1Q8NBJ5 622 aa15.16■□□□□ 0.02
RPAIN-209ENST00000571558 CASP10Q92851 521 aa15.16■□□□□ 0.02
RPAIN-209ENST00000571558 SH2D3AQ9BRG2 576 aa15.16■□□□□ 0.02
RPAIN-209ENST00000571558 GZF1Q9H116 711 aaPredicted RBP15.16■□□□□ 0.02
RPAIN-209ENST00000571558 TYW1Q9NV66 732 aaKnown RBP15.16■□□□□ 0.02
RPAIN-209ENST00000571558 PLXNA3P51805 1871 aa15.16■□□□□ 0.02
RPAIN-209ENST00000571558 VPS13AQ96RL7 3174 aa15.15■□□□□ 0.02
RPAIN-209ENST00000571558 SYCE3A1L190 88 aa15.15■□□□□ 0.02
RPAIN-209ENST00000571558 FRMD3A2A2Y4 597 aa15.15■□□□□ 0.02
RPAIN-209ENST00000571558 DENND3A2RUS2 1198 aa15.15■□□□□ 0.02
RPAIN-209ENST00000571558 TBKBP1A7MCY6 615 aa15.15■□□□□ 0.02
RPAIN-209ENST00000571558 HOXA2O43364 376 aa15.15■□□□□ 0.02
RPAIN-209ENST00000571558 HBP1O60381 514 aa15.15■□□□□ 0.02
RPAIN-209ENST00000571558 ID4P47928 161 aa15.15■□□□□ 0.02
RPAIN-209ENST00000571558 GATMP50440 423 aa15.15■□□□□ 0.02
RPAIN-209ENST00000571558 FAM189BP81408 668 aa15.15■□□□□ 0.02
RPAIN-209ENST00000571558 KRT17Q04695 432 aa15.15■□□□□ 0.02
RPAIN-209ENST00000571558 GIT2Q14161 759 aa15.15■□□□□ 0.02
RPAIN-209ENST00000571558 DYMQ7RTS9 669 aa15.15■□□□□ 0.02
RPAIN-209ENST00000571558 TRMT1LQ7Z2T5 733 aaKnown RBP15.15■□□□□ 0.02
RPAIN-209ENST00000571558 DAW1Q8N136 415 aa15.15■□□□□ 0.02
RPAIN-209ENST00000571558 TMEM105Q8N8V8 129 aa15.15■□□□□ 0.02
RPAIN-209ENST00000571558 CEP170P1Q96L14 293 aa15.15■□□□□ 0.02
RPAIN-209ENST00000571558 GSDMAQ96QA5 445 aa15.15■□□□□ 0.02
RPAIN-209ENST00000571558 TCF25Q9BQ70 676 aa15.15■□□□□ 0.02
RPAIN-209ENST00000571558 REEP2Q9BRK0 252 aa15.15■□□□□ 0.02
RPAIN-209ENST00000571558 FUCA2Q9BTY2 467 aa15.15■□□□□ 0.02
RPAIN-209ENST00000571558 ADAM7Q9H2U9 754 aa15.15■□□□□ 0.02
RPAIN-209ENST00000571558 ERVK-5Q9HDB9 667 aa15.15■□□□□ 0.02
RPAIN-209ENST00000571558 TMEM161AQ9NX61 479 aa15.15■□□□□ 0.02
RPAIN-209ENST00000571558 PPME1Q9Y570 386 aa15.15■□□□□ 0.02
RPAIN-209ENST00000571558 LOXHD1Q8IVV2 1947 aa15.15■□□□□ 0.02
RPAIN-209ENST00000571558 MYH9P35579 1960 aaKnown RBP15.15■□□□□ 0.02
RPAIN-209ENST00000571558 PLXNA4Q9HCM2 1894 aa15.14■□□□□ 0.01
RPAIN-209ENST00000571558 GVINP1Q7Z2Y8 2422 aa15.14■□□□□ 0.01
RPAIN-209ENST00000571558 ZNF292O60281 2723 aa15.14■□□□□ 0.01
RPAIN-209ENST00000571558 ARID2Q68CP9 1835 aa15.14■□□□□ 0.01
RPAIN-209ENST00000571558 PVALEFA0A1B0GWK0 134 aa15.14■□□□□ 0.01
RPAIN-209ENST00000571558 C9IYK1 514 aa15.14■□□□□ 0.01
RPAIN-209ENST00000571558 RPS6KA5O75582 802 aa15.14■□□□□ 0.01
RPAIN-209ENST00000571558 SMC2O95347 1197 aa15.14■□□□□ 0.01
RPAIN-209ENST00000571558 RPN1P04843 607 aaKnown RBP15.14■□□□□ 0.01
RPAIN-209ENST00000571558 MTHFRP42898 656 aa15.14■□□□□ 0.01
RPAIN-209ENST00000571558 EHHADHQ08426 723 aa15.14■□□□□ 0.01
RPAIN-209ENST00000571558 TMEM62Q0P6H9 643 aa15.14■□□□□ 0.01
RPAIN-209ENST00000571558 MAPK7Q13164 816 aa15.14■□□□□ 0.01
RPAIN-209ENST00000571558 MTERF2Q49AM1 385 aa15.14■□□□□ 0.01
RPAIN-209ENST00000571558 PLCD3Q8N3E9 789 aa15.14■□□□□ 0.01
RPAIN-209ENST00000571558 SMARCE1Q969G3 411 aa15.14■□□□□ 0.01
RPAIN-209ENST00000571558 ADAM2Q99965 735 aa15.14■□□□□ 0.01
RPAIN-209ENST00000571558 DHX33Q9H6R0 707 aaKnown RBP15.14■□□□□ 0.01
RPAIN-209ENST00000571558 ATP6V0A4Q9HBG4 840 aa15.14■□□□□ 0.01
RPAIN-209ENST00000571558 XPNPEP1Q9NQW7 623 aa15.14■□□□□ 0.01
RPAIN-209ENST00000571558 MAN1B1Q9UKM7 699 aa15.14■□□□□ 0.01
RPAIN-209ENST00000571558 USTQ9Y2C2 406 aa15.14■□□□□ 0.01
RPAIN-209ENST00000571558 USO1O60763 962 aaKnown RBP15.13■□□□□ 0.01
RPAIN-209ENST00000571558 MAFO75444 373 aaPredicted RBP15.13■□□□□ 0.01
RPAIN-209ENST00000571558 DGAT1O75907 488 aa15.13■□□□□ 0.01
RPAIN-209ENST00000571558 BMP6P22004 513 aa15.13■□□□□ 0.01
RPAIN-209ENST00000571558 RFC5P40937 340 aa15.13■□□□□ 0.01
RPAIN-209ENST00000571558 ZNF131P52739 623 aa15.13■□□□□ 0.01
RPAIN-209ENST00000571558 ZNF445P59923 1031 aa15.13■□□□□ 0.01
RPAIN-209ENST00000571558 RAD51AP2Q09MP3 1159 aa15.13■□□□□ 0.01
RPAIN-209ENST00000571558 MORC3Q14149 939 aa15.13■□□□□ 0.01
RPAIN-209ENST00000571558 BMS1Q14692 1282 aaKnown RBP15.13■□□□□ 0.01
RPAIN-209ENST00000571558 KCNB1Q14721 858 aa15.13■□□□□ 0.01
RPAIN-209ENST00000571558 ZNF484Q5JVG2 852 aa15.13■□□□□ 0.01
RPAIN-209ENST00000571558 FAM102BQ5T8I3 360 aa15.13■□□□□ 0.01
RPAIN-209ENST00000571558 MTHFD1LQ6UB35 978 aa15.13■□□□□ 0.01
RPAIN-209ENST00000571558 UNC13DQ70J99 1090 aa15.13■□□□□ 0.01
RPAIN-209ENST00000571558 ZDHHC14Q8IZN3 488 aa15.13■□□□□ 0.01
RPAIN-209ENST00000571558 CCDC43Q96MW1 224 aaKnown RBP15.13■□□□□ 0.01
RPAIN-209ENST00000571558 TIPINQ9BVW5 301 aa15.13■□□□□ 0.01
RPAIN-209ENST00000571558 TMEM117Q9H0C3 514 aa15.13■□□□□ 0.01
RPAIN-209ENST00000571558 CWH43Q9H720 699 aa15.13■□□□□ 0.01
RPAIN-209ENST00000571558 ENTPD7Q9NQZ7 604 aa15.13■□□□□ 0.01
RPAIN-209ENST00000571558 BMP2KQ9NSY1 1161 aaPredicted RBP15.13■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 42 ms