RNA–Protein interactions for RNA: ENST00000571249.1

CHD3-213, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

TSL 3

Gene CHD3, Length 330 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-213ENST00000571249 PPP4R2Q9NY27 417 aa7.93□□□□□ -1.14
CHD3-213ENST00000571249 ANKMY1Q9P2S6 941 aa7.93□□□□□ -1.14
CHD3-213ENST00000571249 PIAS3Q9Y6X2 628 aa7.93□□□□□ -1.14
CHD3-213ENST00000571249 LRBAP50851 2863 aa7.92□□□□□ -1.14
CHD3-213ENST00000571249 SMIM35A0A1B0GVV1 85 aa7.92□□□□□ -1.14
CHD3-213ENST00000571249 B4E1Z4 1266 aa7.92□□□□□ -1.14
CHD3-213ENST00000571249 RNF113AO15541 343 aaKnown RBP7.92□□□□□ -1.14
CHD3-213ENST00000571249 FIBPO43427 364 aa7.92□□□□□ -1.14
CHD3-213ENST00000571249 SLC28A2O43868 658 aa7.92□□□□□ -1.14
CHD3-213ENST00000571249 ADH1AP07327 375 aa7.92□□□□□ -1.14
CHD3-213ENST00000571249 CT47B1P0C2W7 299 aaPredicted RBP7.92□□□□□ -1.14
CHD3-213ENST00000571249 GP1BBP13224 206 aa7.92□□□□□ -1.14
CHD3-213ENST00000571249 POU3F2P20265 443 aaPredicted RBP7.92□□□□□ -1.14
CHD3-213ENST00000571249 TIE1P35590 1138 aa7.92□□□□□ -1.14
CHD3-213ENST00000571249 MRPS9P82933 396 aaKnown RBP7.92□□□□□ -1.14
CHD3-213ENST00000571249 GHRHRQ02643 423 aa7.92□□□□□ -1.14
CHD3-213ENST00000571249 SEMA3BQ13214 749 aa7.92□□□□□ -1.14
CHD3-213ENST00000571249 ZNF423Q2M1K9 1284 aa7.92□□□□□ -1.14
CHD3-213ENST00000571249 KIZQ2M2Z5 673 aa7.92□□□□□ -1.14
CHD3-213ENST00000571249 TUSC1Q2TAM9 212 aa7.92□□□□□ -1.14
CHD3-213ENST00000571249 C4orf17Q53FE4 359 aa7.92□□□□□ -1.14
CHD3-213ENST00000571249 HSP90AB4PQ58FF6 505 aa7.92□□□□□ -1.14
CHD3-213ENST00000571249 GPATCH4Q5T3I0 446 aaKnown RBP7.92□□□□□ -1.14
CHD3-213ENST00000571249 ELMSAN1Q6PJG2 1045 aa7.92□□□□□ -1.14
CHD3-213ENST00000571249 METTL3Q86U44 580 aaKnown RBP7.92□□□□□ -1.14
CHD3-213ENST00000571249 ZNF598Q86UK7 904 aaKnown RBP7.92□□□□□ -1.14
CHD3-213ENST00000571249 FCHSD1Q86WN1 690 aa7.92□□□□□ -1.14
CHD3-213ENST00000571249 ZNF280BQ86YH2 543 aa7.92□□□□□ -1.14
CHD3-213ENST00000571249 NPAS3Q8IXF0 933 aa7.92□□□□□ -1.14
CHD3-213ENST00000571249 ADAMTS14Q8WXS8 1223 aa7.92□□□□□ -1.14
CHD3-213ENST00000571249 SEPT1Q8WYJ6 367 aa7.92□□□□□ -1.14
CHD3-213ENST00000571249 DNASE1L2Q92874 299 aa7.92□□□□□ -1.14
CHD3-213ENST00000571249 MCRS1Q96EZ8 462 aa7.92□□□□□ -1.14
CHD3-213ENST00000571249 CAMK1GQ96NX5 476 aa7.92□□□□□ -1.14
CHD3-213ENST00000571249 FCRL3Q96P31 734 aaPredicted RBP7.92□□□□□ -1.14
CHD3-213ENST00000571249 INPP4AQ96PE3 977 aaPredicted RBP7.92□□□□□ -1.14
CHD3-213ENST00000571249 RPS6KC1Q96S38 1066 aa7.92□□□□□ -1.14
CHD3-213ENST00000571249 OSMRQ99650 979 aa7.92□□□□□ -1.14
CHD3-213ENST00000571249 EPAS1Q99814 870 aa7.92□□□□□ -1.14
CHD3-213ENST00000571249 SMARCAD1Q9H4L7 1026 aa7.92□□□□□ -1.14
CHD3-213ENST00000571249 BRD9Q9H8M2 597 aa7.92□□□□□ -1.14
CHD3-213ENST00000571249 VRTNQ9H8Y1 702 aa7.92□□□□□ -1.14
CHD3-213ENST00000571249 HCFC1R1Q9NWW0 138 aa7.92□□□□□ -1.14
CHD3-213ENST00000571249 NXF1Q9UBU9 619 aaKnown RBP7.92□□□□□ -1.14
CHD3-213ENST00000571249 MBD1Q9UIS9 605 aaPredicted RBP7.92□□□□□ -1.14
CHD3-213ENST00000571249 DNHD1Q96M86 4753 aa7.92□□□□□ -1.14
CHD3-213ENST00000571249 COL5A1P20908 1838 aaPredicted RBP7.92□□□□□ -1.14
CHD3-213ENST00000571249 NOTCH4Q99466 2003 aa7.91□□□□□ -1.14
CHD3-213ENST00000571249 CCDC194A0A1B0GVG4 234 aa7.91□□□□□ -1.14
CHD3-213ENST00000571249 TRABD2BA6NFA1 517 aa7.91□□□□□ -1.14
CHD3-213ENST00000571249 MEIS3P2A8K0S8 358 aa7.91□□□□□ -1.14
CHD3-213ENST00000571249 MAP3K7O43318 606 aa7.91□□□□□ -1.14
CHD3-213ENST00000571249 DHX16O60231 1041 aaKnown RBP7.91□□□□□ -1.14
CHD3-213ENST00000571249 ECI2O75521 394 aa7.91□□□□□ -1.14
CHD3-213ENST00000571249 EIF2S3P41091 472 aaKnown RBP7.91□□□□□ -1.14
CHD3-213ENST00000571249 SOX9P48436 509 aa7.91□□□□□ -1.14
CHD3-213ENST00000571249 RRP12Q5JTH9 1297 aaKnown RBP7.91□□□□□ -1.14
CHD3-213ENST00000571249 CEP85Q6P2H3 762 aa7.91□□□□□ -1.14
CHD3-213ENST00000571249 LILRA6Q6PI73 481 aa7.91□□□□□ -1.14
CHD3-213ENST00000571249 MTHFD1LQ6UB35 978 aa7.91□□□□□ -1.14
CHD3-213ENST00000571249 FMNL3Q8IVF7 1028 aa7.91□□□□□ -1.14
CHD3-213ENST00000571249 KIAA0319LQ8IZA0 1049 aa7.91□□□□□ -1.14
CHD3-213ENST00000571249 LPPQ93052 612 aa7.91□□□□□ -1.14
CHD3-213ENST00000571249 KIF1BPQ96EK5 621 aa7.91□□□□□ -1.14
CHD3-213ENST00000571249 B3GALT6Q96L58 329 aa7.91□□□□□ -1.14
CHD3-213ENST00000571249 PCYT2Q99447 389 aa7.91□□□□□ -1.14
CHD3-213ENST00000571249 SENP7Q9BQF6 1050 aa7.91□□□□□ -1.14
CHD3-213ENST00000571249 MRPL9Q9BYD2 267 aaKnown RBP7.91□□□□□ -1.14
CHD3-213ENST00000571249 PLEKHA4Q9H4M7 779 aa7.91□□□□□ -1.14
CHD3-213ENST00000571249 ZNF334Q9HCZ1 680 aaPredicted RBP7.91□□□□□ -1.14
CHD3-213ENST00000571249 FSCN3Q9NQT6 498 aa7.91□□□□□ -1.14
CHD3-213ENST00000571249 TOMM22Q9NS69 142 aa7.91□□□□□ -1.14
CHD3-213ENST00000571249 TBC1D13Q9NVG8 400 aa7.91□□□□□ -1.14
CHD3-213ENST00000571249 ZDHHC7Q9NXF8 308 aa7.91□□□□□ -1.14
CHD3-213ENST00000571249 MAP3K20Q9NYL2 800 aaKnown RBP7.91□□□□□ -1.14
CHD3-213ENST00000571249 DKK4Q9UBT3 224 aa7.91□□□□□ -1.14
CHD3-213ENST00000571249 IL17BQ9UHF5 180 aa7.91□□□□□ -1.14
CHD3-213ENST00000571249 DPP7Q9UHL4 492 aa7.91□□□□□ -1.14
CHD3-213ENST00000571249 RCAN3Q9UKA8 241 aa7.91□□□□□ -1.14
CHD3-213ENST00000571249 INVSQ9Y283 1065 aa7.91□□□□□ -1.14
CHD3-213ENST00000571249 PAXBP1Q9Y5B6 917 aa7.91□□□□□ -1.14
CHD3-213ENST00000571249 SPTBN1Q01082 2364 aaKnown RBP7.9□□□□□ -1.14
CHD3-213ENST00000571249 NUP205Q92621 2012 aa7.9□□□□□ -1.14
CHD3-213ENST00000571249 EML5Q05BV3 1969 aa7.9□□□□□ -1.14
CHD3-213ENST00000571249 CAPN8A6NHC0 703 aa7.9□□□□□ -1.14
CHD3-213ENST00000571249 CCL16O15467 120 aa7.9□□□□□ -1.14
CHD3-213ENST00000571249 ORC4O43929 436 aa7.9□□□□□ -1.14
CHD3-213ENST00000571249 ATP9AO75110 1047 aa7.9□□□□□ -1.14
CHD3-213ENST00000571249 FTH1P19P0C7X4 201 aa7.9□□□□□ -1.14
CHD3-213ENST00000571249 ZSCAN20P17040 1043 aaPredicted RBP7.9□□□□□ -1.14
CHD3-213ENST00000571249 RPL17P18621 184 aaKnown RBP7.9□□□□□ -1.14
CHD3-213ENST00000571249 LY6DQ14210 128 aa7.9□□□□□ -1.14
CHD3-213ENST00000571249 HDAC7Q8WUI4 952 aa7.9□□□□□ -1.14
CHD3-213ENST00000571249 AMNQ9BXJ7 453 aa7.9□□□□□ -1.14
CHD3-213ENST00000571249 FZD8Q9H461 694 aa7.9□□□□□ -1.14
CHD3-213ENST00000571249 JMJD4Q9H9V9 463 aa7.9□□□□□ -1.14
CHD3-213ENST00000571249 CHST12Q9NRB3 414 aa7.9□□□□□ -1.14
CHD3-213ENST00000571249 POLIQ9UNA4 740 aa7.9□□□□□ -1.14
CHD3-213ENST00000571249 INPP5FQ9Y2H2 1132 aa7.9□□□□□ -1.14
CHD3-213ENST00000571249 NF1P21359 2839 aa7.9□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms