RNA–Protein interactions for RNA: ENST00000570828.5

CTDNEP1-205, Transcript of CTD nuclear envelope phosphatase 1, humanhuman

TSL 3

Gene CTDNEP1, Length 986 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDNEP1-205ENST00000570828 MCTP1Q6DN14 999 aa13.69□□□□□ -0.22
CTDNEP1-205ENST00000570828 ANKRD54Q6NXT1 300 aa13.69□□□□□ -0.22
CTDNEP1-205ENST00000570828 TMEM184AQ6ZMB5 413 aa13.69□□□□□ -0.22
CTDNEP1-205ENST00000570828 DDX53Q86TM3 631 aaKnown RBP13.69□□□□□ -0.22
CTDNEP1-205ENST00000570828 ZNF280BQ86YH2 543 aa13.69□□□□□ -0.22
CTDNEP1-205ENST00000570828 SMG8Q8ND04 991 aaKnown RBP13.69□□□□□ -0.22
CTDNEP1-205ENST00000570828 CASP10Q92851 521 aa13.69□□□□□ -0.22
CTDNEP1-205ENST00000570828 TMEM175Q9BSA9 504 aa13.69□□□□□ -0.22
CTDNEP1-205ENST00000570828 APOL6Q9BWW8 343 aa13.69□□□□□ -0.22
CTDNEP1-205ENST00000570828 SLC4A5Q9BY07 1137 aa13.69□□□□□ -0.22
CTDNEP1-205ENST00000570828 C2orf40Q9H1Z8 148 aa13.69□□□□□ -0.22
CTDNEP1-205ENST00000570828 LRWD1Q9UFC0 647 aa13.69□□□□□ -0.22
CTDNEP1-205ENST00000570828 HCFC2Q9Y5Z7 792 aa13.69□□□□□ -0.22
CTDNEP1-205ENST00000570828 ARID2Q68CP9 1835 aa13.69□□□□□ -0.22
CTDNEP1-205ENST00000570828 ARL5CA6NH57 179 aa13.68□□□□□ -0.22
CTDNEP1-205ENST00000570828 LAD1O00515 517 aa13.68□□□□□ -0.22
CTDNEP1-205ENST00000570828 B4GALT3O60512 393 aa13.68□□□□□ -0.22
CTDNEP1-205ENST00000570828 GPR37L1O60883 481 aa13.68□□□□□ -0.22
CTDNEP1-205ENST00000570828 DDHD2O94830 711 aa13.68□□□□□ -0.22
CTDNEP1-205ENST00000570828 CTSAP10619 480 aa13.68□□□□□ -0.22
CTDNEP1-205ENST00000570828 HOXB8P17481 243 aaPredicted RBP13.68□□□□□ -0.22
CTDNEP1-205ENST00000570828 MCM2P49736 904 aa13.68□□□□□ -0.22
CTDNEP1-205ENST00000570828 AFF1P51825 1210 aaKnown RBP13.68□□□□□ -0.22
CTDNEP1-205ENST00000570828 PTGDRQ13258 359 aa13.68□□□□□ -0.22
CTDNEP1-205ENST00000570828 KCNC3Q14003 757 aa13.68□□□□□ -0.22
CTDNEP1-205ENST00000570828 CDCA2Q69YH5 1023 aaPredicted RBP13.68□□□□□ -0.22
CTDNEP1-205ENST00000570828 SLC27A1Q6PCB7 646 aa13.68□□□□□ -0.22
CTDNEP1-205ENST00000570828 C4orf32Q8N8J7 132 aa13.68□□□□□ -0.22
CTDNEP1-205ENST00000570828 SNX29Q8TEQ0 813 aa13.68□□□□□ -0.22
CTDNEP1-205ENST00000570828 BCL7CQ8WUZ0 217 aaPredicted RBP13.68□□□□□ -0.22
CTDNEP1-205ENST00000570828 AUTS2Q8WXX7 1259 aa13.68□□□□□ -0.22
CTDNEP1-205ENST00000570828 TMX3Q96JJ7 454 aa13.68□□□□□ -0.22
CTDNEP1-205ENST00000570828 PRIMPOLQ96LW4 560 aa13.68□□□□□ -0.22
CTDNEP1-205ENST00000570828 GAD1Q99259 594 aa13.68□□□□□ -0.22
CTDNEP1-205ENST00000570828 PHF7Q9BWX1 381 aaPredicted RBP13.68□□□□□ -0.22
CTDNEP1-205ENST00000570828 NXF3Q9H4D5 531 aaKnown RBP13.68□□□□□ -0.22
CTDNEP1-205ENST00000570828 C11orf16Q9NQ32 467 aa13.68□□□□□ -0.22
CTDNEP1-205ENST00000570828 PRMT7Q9NVM4 692 aaPredicted RBP13.68□□□□□ -0.22
CTDNEP1-205ENST00000570828 HES2Q9Y543 173 aa13.68□□□□□ -0.22
CTDNEP1-205ENST00000570828 PCDHB6Q9Y5E3 794 aa13.68□□□□□ -0.22
CTDNEP1-205ENST00000570828 H3BQV1 296 aa13.67□□□□□ -0.22
CTDNEP1-205ENST00000570828 CLASP2O75122 1294 aaKnown RBP13.67□□□□□ -0.22
CTDNEP1-205ENST00000570828 NPTXRO95502 500 aa13.67□□□□□ -0.22
CTDNEP1-205ENST00000570828 ALDH2P05091 517 aa13.67□□□□□ -0.22
CTDNEP1-205ENST00000570828 CYP11B2P19099 503 aa13.67□□□□□ -0.22
CTDNEP1-205ENST00000570828 TOB1P50616 345 aaPredicted RBP13.67□□□□□ -0.22
CTDNEP1-205ENST00000570828 SCNN1GP51170 649 aa13.67□□□□□ -0.22
CTDNEP1-205ENST00000570828 CBX2Q14781 532 aaPredicted RBP13.67□□□□□ -0.22
CTDNEP1-205ENST00000570828 PPP2R5AQ15172 486 aa13.67□□□□□ -0.22
CTDNEP1-205ENST00000570828 SYCE2Q6PIF2 218 aa13.67□□□□□ -0.22
CTDNEP1-205ENST00000570828 CDR2LQ86X02 465 aaPredicted RBP13.67□□□□□ -0.22
CTDNEP1-205ENST00000570828 RNF135Q8IUD6 432 aa13.67□□□□□ -0.22
CTDNEP1-205ENST00000570828 DEPTORQ8TB45 409 aa13.67□□□□□ -0.22
CTDNEP1-205ENST00000570828 SUSD6Q92537 303 aa13.67□□□□□ -0.22
CTDNEP1-205ENST00000570828 ZFP42Q96MM3 310 aa13.67□□□□□ -0.22
CTDNEP1-205ENST00000570828 APOL5Q9BWW9 433 aa13.67□□□□□ -0.22
CTDNEP1-205ENST00000570828 BHMT2Q9H2M3 363 aa13.67□□□□□ -0.22
CTDNEP1-205ENST00000570828 RAPGEFL1Q9UHV5 662 aa13.67□□□□□ -0.22
CTDNEP1-205ENST00000570828 MUTYHQ9UIF7 546 aa13.67□□□□□ -0.22
CTDNEP1-205ENST00000570828 FAN1Q9Y2M0 1017 aa13.67□□□□□ -0.22
CTDNEP1-205ENST00000570828 GIT1Q9Y2X7 761 aa13.67□□□□□ -0.22
CTDNEP1-205ENST00000570828 PRG3Q9Y2Y8 225 aaPredicted RBP13.67□□□□□ -0.22
CTDNEP1-205ENST00000570828 HCN4Q9Y3Q4 1203 aa13.67□□□□□ -0.22
CTDNEP1-205ENST00000570828 IRAK3Q9Y616 596 aa13.67□□□□□ -0.22
CTDNEP1-205ENST00000570828 A0A1B0GUA9 196 aa13.66□□□□□ -0.22
CTDNEP1-205ENST00000570828 PRR33A8MZF0 331 aa13.66□□□□□ -0.22
CTDNEP1-205ENST00000570828 NRP1O14786 923 aa13.66□□□□□ -0.22
CTDNEP1-205ENST00000570828 INPPL1O15357 1258 aa13.66□□□□□ -0.22
CTDNEP1-205ENST00000570828 NR1I2O75469 434 aa13.66□□□□□ -0.22
CTDNEP1-205ENST00000570828 SSBP05455 408 aaKnown RBP eCLIP13.66□□□□□ -0.22
CTDNEP1-205ENST00000570828 LIG1P18858 919 aa13.66□□□□□ -0.22
CTDNEP1-205ENST00000570828 NAMPTP43490 491 aa13.66□□□□□ -0.22
CTDNEP1-205ENST00000570828 OR1G1P47890 313 aa13.66□□□□□ -0.22
CTDNEP1-205ENST00000570828 PDIA5Q14554 519 aa13.66□□□□□ -0.22
CTDNEP1-205ENST00000570828 PTPN14Q15678 1187 aa13.66□□□□□ -0.22
CTDNEP1-205ENST00000570828 MAPK6Q16659 721 aa13.66□□□□□ -0.22
CTDNEP1-205ENST00000570828 RILPL1Q5EBL4 403 aa13.66□□□□□ -0.22
CTDNEP1-205ENST00000570828 KRT79Q5XKE5 535 aa13.66□□□□□ -0.22
CTDNEP1-205ENST00000570828 CES5AQ6NT32 575 aa13.66□□□□□ -0.22
CTDNEP1-205ENST00000570828 DTHD1Q6ZMT9 781 aa13.66□□□□□ -0.22
CTDNEP1-205ENST00000570828 IGSF22Q8N9C0 903 aa13.66□□□□□ -0.22
CTDNEP1-205ENST00000570828 BSNDQ8WZ55 320 aa13.66□□□□□ -0.22
CTDNEP1-205ENST00000570828 KIFAP3Q92845 792 aa13.66□□□□□ -0.22
CTDNEP1-205ENST00000570828 RPGRIP1Q96KN7 1286 aa13.66□□□□□ -0.22
CTDNEP1-205ENST00000570828 IFT74Q96LB3 600 aa13.66□□□□□ -0.22
CTDNEP1-205ENST00000570828 RPS6KC1Q96S38 1066 aa13.66□□□□□ -0.22
CTDNEP1-205ENST00000570828 VN1R3Q9BXE9 311 aa13.66□□□□□ -0.22
CTDNEP1-205ENST00000570828 S1PR5Q9H228 398 aa13.66□□□□□ -0.22
CTDNEP1-205ENST00000570828 DDX19AQ9NUU7 478 aaKnown RBP13.66□□□□□ -0.22
CTDNEP1-205ENST00000570828 DZANK1Q9NVP4 752 aa13.66□□□□□ -0.22
CTDNEP1-205ENST00000570828 PARP2Q9UGN5 583 aa13.66□□□□□ -0.22
CTDNEP1-205ENST00000570828 KIAA1024Q9UPX6 916 aa13.66□□□□□ -0.22
CTDNEP1-205ENST00000570828 LOC730098B7Z3J9 87 aa13.65□□□□□ -0.22
CTDNEP1-205ENST00000570828 N4BP3O15049 544 aa13.65□□□□□ -0.22
CTDNEP1-205ENST00000570828 CD2BP2O95400 341 aaKnown RBP13.65□□□□□ -0.22
CTDNEP1-205ENST00000570828 PRKCBP05771 671 aa13.65□□□□□ -0.22
CTDNEP1-205ENST00000570828 URODP06132 367 aa13.65□□□□□ -0.22
CTDNEP1-205ENST00000570828 AKAP5P24588 427 aa13.65□□□□□ -0.22
CTDNEP1-205ENST00000570828 GJB2P29033 226 aa13.65□□□□□ -0.22
CTDNEP1-205ENST00000570828 PRPHP41219 470 aa13.65□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms