RNA–Protein interactions for RNA: ENST00000569916.1

CNOT1-220, Transcript of CCR4-NOT transcription complex subunit 1, humanhuman

TSL 3

Gene CNOT1, Length 599 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT1-220ENST00000569916 SLC39A14Q15043 492 aa14.35□□□□□ -0.11
CNOT1-220ENST00000569916 DUSP6Q16828 381 aa14.35□□□□□ -0.11
CNOT1-220ENST00000569916 TMEM132AQ24JP5 1023 aa14.35□□□□□ -0.11
CNOT1-220ENST00000569916 ATF7IP2Q5U623 682 aa14.35□□□□□ -0.11
CNOT1-220ENST00000569916 GPBP1Q86WP2 473 aa14.35□□□□□ -0.11
CNOT1-220ENST00000569916 COLGALT2Q8IYK4 626 aa14.35□□□□□ -0.11
CNOT1-220ENST00000569916 RASSF8Q8NHQ8 419 aa14.35□□□□□ -0.11
CNOT1-220ENST00000569916 RAD54LQ92698 747 aa14.35□□□□□ -0.11
CNOT1-220ENST00000569916 CLIC6Q96NY7 704 aa14.35□□□□□ -0.11
CNOT1-220ENST00000569916 NECAB3Q96P71 396 aaPredicted RBP14.35□□□□□ -0.11
CNOT1-220ENST00000569916 UHRF1Q96T88 793 aaPredicted RBP14.35□□□□□ -0.11
CNOT1-220ENST00000569916 ADPGKQ9BRR6 497 aa14.35□□□□□ -0.11
CNOT1-220ENST00000569916 TMEM175Q9BSA9 504 aa14.35□□□□□ -0.11
CNOT1-220ENST00000569916 NTPCRQ9BSD7 190 aaKnown RBP14.35□□□□□ -0.11
CNOT1-220ENST00000569916 TMEM134Q9H6X4 195 aa14.35□□□□□ -0.11
CNOT1-220ENST00000569916 NGRNQ9NPE2 291 aaKnown RBP14.35□□□□□ -0.11
CNOT1-220ENST00000569916 KMT5AQ9NQR1 393 aa14.35□□□□□ -0.11
CNOT1-220ENST00000569916 PARP2Q9UGN5 583 aa14.35□□□□□ -0.11
CNOT1-220ENST00000569916 CUL9Q8IWT3 2517 aa14.34□□□□□ -0.11
CNOT1-220ENST00000569916 HIDE1A8MVS5 230 aa14.34□□□□□ -0.11
CNOT1-220ENST00000569916 PER2O15055 1255 aa14.34□□□□□ -0.11
CNOT1-220ENST00000569916 SLC16A4O15374 487 aa14.34□□□□□ -0.11
CNOT1-220ENST00000569916 MCM6Q14566 821 aa14.34□□□□□ -0.11
CNOT1-220ENST00000569916 DCAF4L1Q3SXM0 396 aa14.34□□□□□ -0.11
CNOT1-220ENST00000569916 TMC7Q7Z402 723 aa14.34□□□□□ -0.11
CNOT1-220ENST00000569916 DDX53Q86TM3 631 aaKnown RBP14.34□□□□□ -0.11
CNOT1-220ENST00000569916 SPIRE2Q8WWL2 714 aa14.34□□□□□ -0.11
CNOT1-220ENST00000569916 LARP4BQ92615 738 aaKnown RBP14.34□□□□□ -0.11
CNOT1-220ENST00000569916 FAM193BQ96PV7 902 aaPredicted RBP14.34□□□□□ -0.11
CNOT1-220ENST00000569916 CDCA3Q99618 268 aaPredicted RBP14.34□□□□□ -0.11
CNOT1-220ENST00000569916 REEP2Q9BRK0 252 aa14.34□□□□□ -0.11
CNOT1-220ENST00000569916 VN1R3Q9BXE9 311 aa14.34□□□□□ -0.11
CNOT1-220ENST00000569916 ZBP1Q9H171 429 aa14.34□□□□□ -0.11
CNOT1-220ENST00000569916 TLE6Q9H808 572 aa14.34□□□□□ -0.11
CNOT1-220ENST00000569916 MARCH5Q9NX47 278 aa14.34□□□□□ -0.11
CNOT1-220ENST00000569916 SNTG2Q9NY99 539 aa14.34□□□□□ -0.11
CNOT1-220ENST00000569916 KLK14Q9P0G3 267 aa14.34□□□□□ -0.11
CNOT1-220ENST00000569916 ODF2LQ9ULJ1 636 aa14.34□□□□□ -0.11
CNOT1-220ENST00000569916 TNFSF13BQ9Y275 285 aa14.34□□□□□ -0.11
CNOT1-220ENST00000569916 RBM19Q9Y4C8 960 aaKnown RBP14.34□□□□□ -0.11
CNOT1-220ENST00000569916 CITO14578 2027 aa14.34□□□□□ -0.11
CNOT1-220ENST00000569916 C2orf71A6NGG8 1288 aa14.33□□□□□ -0.12
CNOT1-220ENST00000569916 NRP1O14786 923 aa14.33□□□□□ -0.12
CNOT1-220ENST00000569916 RECQL4O94761 1208 aa14.33□□□□□ -0.12
CNOT1-220ENST00000569916 ZSCAN22P10073 491 aaPredicted RBP14.33□□□□□ -0.12
CNOT1-220ENST00000569916 PDIA4P13667 645 aaKnown RBP14.33□□□□□ -0.12
CNOT1-220ENST00000569916 IL9P15248 144 aa14.33□□□□□ -0.12
CNOT1-220ENST00000569916 NDUFV1P49821 464 aa14.33□□□□□ -0.12
CNOT1-220ENST00000569916 RBM10P98175 930 aaKnown RBP14.33□□□□□ -0.12
CNOT1-220ENST00000569916 GRIK3Q13003 919 aa14.33□□□□□ -0.12
CNOT1-220ENST00000569916 PKP1Q13835 747 aa14.33□□□□□ -0.12
CNOT1-220ENST00000569916 DHX8Q14562 1220 aaKnown RBP14.33□□□□□ -0.12
CNOT1-220ENST00000569916 SMC1AQ14683 1233 aaKnown RBP14.33□□□□□ -0.12
CNOT1-220ENST00000569916 FOXD4L5Q5VV16 416 aaPredicted RBP14.33□□□□□ -0.12
CNOT1-220ENST00000569916 PTCRAQ6ISU1 281 aaPredicted RBP14.33□□□□□ -0.12
CNOT1-220ENST00000569916 VPS52Q8N1B4 723 aa14.33□□□□□ -0.12
CNOT1-220ENST00000569916 KRI1Q8N9T8 703 aaKnown RBP14.33□□□□□ -0.12
CNOT1-220ENST00000569916 SPRYD3Q8NCJ5 442 aa14.33□□□□□ -0.12
CNOT1-220ENST00000569916 LINC00301Q8NCQ3 95 aa14.33□□□□□ -0.12
CNOT1-220ENST00000569916 TMEM161BQ8NDZ6 487 aa14.33□□□□□ -0.12
CNOT1-220ENST00000569916 VN1R2Q8NFZ6 395 aa14.33□□□□□ -0.12
CNOT1-220ENST00000569916 FOXD4L4Q8WXT5 416 aaPredicted RBP14.33□□□□□ -0.12
CNOT1-220ENST00000569916 MSLNLQ96KJ4 702 aa14.33□□□□□ -0.12
CNOT1-220ENST00000569916 RPS6KC1Q96S38 1066 aa14.33□□□□□ -0.12
CNOT1-220ENST00000569916 ACO2Q99798 780 aaKnown RBP14.33□□□□□ -0.12
CNOT1-220ENST00000569916 TARS2Q9BW92 718 aaKnown RBP14.33□□□□□ -0.12
CNOT1-220ENST00000569916 MRPL4Q9BYD3 311 aaKnown RBP14.33□□□□□ -0.12
CNOT1-220ENST00000569916 CLEC1BQ9P126 229 aa14.33□□□□□ -0.12
CNOT1-220ENST00000569916 PRG3Q9Y2Y8 225 aaPredicted RBP14.33□□□□□ -0.12
CNOT1-220ENST00000569916 PLXNA3P51805 1871 aa14.32□□□□□ -0.12
CNOT1-220ENST00000569916 FSD2A1L4K1 749 aa14.32□□□□□ -0.12
CNOT1-220ENST00000569916 GRXCR2A6NFK2 248 aa14.32□□□□□ -0.12
CNOT1-220ENST00000569916 ABLIM1O14639 778 aa14.32□□□□□ -0.12
CNOT1-220ENST00000569916 PTGESO14684 152 aa14.32□□□□□ -0.12
CNOT1-220ENST00000569916 F13A1P00488 732 aa14.32□□□□□ -0.12
CNOT1-220ENST00000569916 ALDH2P05091 517 aa14.32□□□□□ -0.12
CNOT1-220ENST00000569916 CTSAP10619 480 aa14.32□□□□□ -0.12
CNOT1-220ENST00000569916 MAPTP10636 758 aaKnown RBP14.32□□□□□ -0.12
CNOT1-220ENST00000569916 OR1G1P47890 313 aa14.32□□□□□ -0.12
CNOT1-220ENST00000569916 ZNF131P52739 623 aa14.32□□□□□ -0.12
CNOT1-220ENST00000569916 NCKAP1LP55160 1127 aa14.32□□□□□ -0.12
CNOT1-220ENST00000569916 KCNC3Q14003 757 aa14.32□□□□□ -0.12
CNOT1-220ENST00000569916 GIT2Q14161 759 aa14.32□□□□□ -0.12
CNOT1-220ENST00000569916 STK38Q15208 465 aa14.32□□□□□ -0.12
CNOT1-220ENST00000569916 CLUL1Q15846 466 aa14.32□□□□□ -0.12
CNOT1-220ENST00000569916 PUS10Q3MIT2 529 aaKnown RBP14.32□□□□□ -0.12
CNOT1-220ENST00000569916 MRPL43Q8N983 215 aaKnown RBP14.32□□□□□ -0.12
CNOT1-220ENST00000569916 ZNF396Q96N95 335 aaPredicted RBP14.32□□□□□ -0.12
CNOT1-220ENST00000569916 CDT1Q9H211 546 aa14.32□□□□□ -0.12
CNOT1-220ENST00000569916 CXCL16Q9H2A7 254 aa14.32□□□□□ -0.12
CNOT1-220ENST00000569916 PTPRHQ9HD43 1115 aa14.32□□□□□ -0.12
CNOT1-220ENST00000569916 LARSQ9P2J5 1176 aaKnown RBP14.32□□□□□ -0.12
CNOT1-220ENST00000569916 STK17AQ9UEE5 414 aa14.32□□□□□ -0.12
CNOT1-220ENST00000569916 DAXXQ9UER7 740 aaPredicted RBP14.32□□□□□ -0.12
CNOT1-220ENST00000569916 CCDC39Q9UFE4 941 aa14.32□□□□□ -0.12
CNOT1-220ENST00000569916 BARX2Q9UMQ3 279 aaPredicted RBP14.32□□□□□ -0.12
CNOT1-220ENST00000569916 FAN1Q9Y2M0 1017 aa14.32□□□□□ -0.12
CNOT1-220ENST00000569916 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP14.31□□□□□ -0.12
CNOT1-220ENST00000569916 F8W810 466 aa14.31□□□□□ -0.12
CNOT1-220ENST00000569916 TNFRSF10AO00220 468 aa14.31□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms