RNA–Protein interactions for RNA: ENST00000569829.1

RPAP1-212, Transcript of RNA polymerase II associated protein 1, humanhuman

TSL 1 (best)

Gene RPAP1, Length 597 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAP1-212ENST00000569829 EIF2AQ9BY44 585 aaKnown RBP11.32□□□□□ -0.6
RPAP1-212ENST00000569829 GPR62Q9BZJ7 368 aa11.32□□□□□ -0.6
RPAP1-212ENST00000569829 PARD6AQ9NPB6 346 aa11.32□□□□□ -0.6
RPAP1-212ENST00000569829 AGPAT5Q9NUQ2 364 aa11.32□□□□□ -0.6
RPAP1-212ENST00000569829 SPATA6Q9NWH7 488 aaPredicted RBP11.32□□□□□ -0.6
RPAP1-212ENST00000569829 MTCL1Q9Y4B5 1905 aaKnown RBP11.32□□□□□ -0.6
RPAP1-212ENST00000569829 PATJQ8NI35 1801 aa11.31□□□□□ -0.6
RPAP1-212ENST00000569829 DDX11L8A8MPP1 907 aa11.31□□□□□ -0.6
RPAP1-212ENST00000569829 GAS2O43903 313 aaKnown RBP11.31□□□□□ -0.6
RPAP1-212ENST00000569829 GAS7O60861 476 aa11.31□□□□□ -0.6
RPAP1-212ENST00000569829 KINO60870 393 aaKnown RBP11.31□□□□□ -0.6
RPAP1-212ENST00000569829 MAFO75444 373 aaPredicted RBP11.31□□□□□ -0.6
RPAP1-212ENST00000569829 TDP2O95551 362 aa11.31□□□□□ -0.6
RPAP1-212ENST00000569829 ADH1AP07327 375 aa11.31□□□□□ -0.6
RPAP1-212ENST00000569829 SRGAP2CP0DJJ0 459 aa11.31□□□□□ -0.6
RPAP1-212ENST00000569829 TGM1P22735 817 aa11.31□□□□□ -0.6
RPAP1-212ENST00000569829 MLH1P40692 756 aa11.31□□□□□ -0.6
RPAP1-212ENST00000569829 GLUD2P49448 558 aa11.31□□□□□ -0.6
RPAP1-212ENST00000569829 SCNN1GP51170 649 aa11.31□□□□□ -0.6
RPAP1-212ENST00000569829 JAK3P52333 1124 aa11.31□□□□□ -0.6
RPAP1-212ENST00000569829 STARD6P59095 220 aa11.31□□□□□ -0.6
RPAP1-212ENST00000569829 CSTF1Q05048 431 aaKnown RBP11.31□□□□□ -0.6
RPAP1-212ENST00000569829 UBXN2BQ14CS0 331 aa11.31□□□□□ -0.6
RPAP1-212ENST00000569829 NONOQ15233 471 aaKnown RBP eCLIP11.31□□□□□ -0.6
RPAP1-212ENST00000569829 LPAL2Q16609 132 aa11.31□□□□□ -0.6
RPAP1-212ENST00000569829 LRCH2Q5VUJ6 765 aa11.31□□□□□ -0.6
RPAP1-212ENST00000569829 ZC3H14Q6PJT7 736 aaKnown RBP11.31□□□□□ -0.6
RPAP1-212ENST00000569829 PRSS55Q6UWB4 352 aaPredicted RBP11.31□□□□□ -0.6
RPAP1-212ENST00000569829 ANO5Q75V66 913 aa11.31□□□□□ -0.6
RPAP1-212ENST00000569829 MIER3Q7Z3K6 550 aa11.31□□□□□ -0.6
RPAP1-212ENST00000569829 GRASPQ7Z6J2 395 aaPredicted RBP11.31□□□□□ -0.6
RPAP1-212ENST00000569829 ETNPPLQ8TBG4 499 aa11.31□□□□□ -0.6
RPAP1-212ENST00000569829 URGCPQ8TCY9 931 aa11.31□□□□□ -0.6
RPAP1-212ENST00000569829 STAMQ92783 540 aa11.31□□□□□ -0.6
RPAP1-212ENST00000569829 TMEM143Q96AN5 459 aa11.31□□□□□ -0.6
RPAP1-212ENST00000569829 FAM20AQ96MK3 541 aa11.31□□□□□ -0.6
RPAP1-212ENST00000569829 TMEM175Q9BSA9 504 aa11.31□□□□□ -0.6
RPAP1-212ENST00000569829 APOL6Q9BWW8 343 aa11.31□□□□□ -0.6
RPAP1-212ENST00000569829 TEKT3Q9BXF9 490 aa11.31□□□□□ -0.6
RPAP1-212ENST00000569829 NIFKQ9BYG3 293 aaKnown RBP11.31□□□□□ -0.6
RPAP1-212ENST00000569829 RXFP1Q9HBX9 757 aa11.31□□□□□ -0.6
RPAP1-212ENST00000569829 WRAP73Q9P2S5 460 aaPredicted RBP11.31□□□□□ -0.6
RPAP1-212ENST00000569829 NCDNQ9UBB6 729 aa11.31□□□□□ -0.6
RPAP1-212ENST00000569829 KCNJ14Q9UNX9 436 aa11.31□□□□□ -0.6
RPAP1-212ENST00000569829 FRYQ5TBA9 3013 aa11.3□□□□□ -0.6
RPAP1-212ENST00000569829 EML1O00423 815 aa11.3□□□□□ -0.6
RPAP1-212ENST00000569829 GCFC2P16383 781 aaKnown RBP11.3□□□□□ -0.6
RPAP1-212ENST00000569829 NEK4P51957 841 aa11.3□□□□□ -0.6
RPAP1-212ENST00000569829 DSG1Q02413 1049 aa11.3□□□□□ -0.6
RPAP1-212ENST00000569829 INF2Q27J81 1249 aa11.3□□□□□ -0.6
RPAP1-212ENST00000569829 XKR3Q5GH77 459 aa11.3□□□□□ -0.6
RPAP1-212ENST00000569829 LILRA6Q6PI73 481 aa11.3□□□□□ -0.6
RPAP1-212ENST00000569829 ZNF410Q86VK4 478 aa11.3□□□□□ -0.6
RPAP1-212ENST00000569829 CDR2LQ86X02 465 aaPredicted RBP11.3□□□□□ -0.6
RPAP1-212ENST00000569829 ITFG1Q8TB96 612 aa11.3□□□□□ -0.6
RPAP1-212ENST00000569829 WASF1Q92558 559 aa11.3□□□□□ -0.6
RPAP1-212ENST00000569829 PGBD4Q96DM1 585 aa11.3□□□□□ -0.6
RPAP1-212ENST00000569829 CPB2Q96IY4 423 aa11.3□□□□□ -0.6
RPAP1-212ENST00000569829 PAAF1Q9BRP4 392 aa11.3□□□□□ -0.6
RPAP1-212ENST00000569829 PRKD2Q9BZL6 878 aa11.3□□□□□ -0.6
RPAP1-212ENST00000569829 KCNMB3Q9NPA1 279 aa11.3□□□□□ -0.6
RPAP1-212ENST00000569829 SLC2A4RGQ9NR83 387 aa11.3□□□□□ -0.6
RPAP1-212ENST00000569829 ORC3Q9UBD5 711 aaPredicted RBP11.3□□□□□ -0.6
RPAP1-212ENST00000569829 NOTCH4Q99466 2003 aa11.3□□□□□ -0.6
RPAP1-212ENST00000569829 KANSL1LA0AUZ9 987 aa11.29□□□□□ -0.6
RPAP1-212ENST00000569829 ARL5CA6NH57 179 aa11.29□□□□□ -0.6
RPAP1-212ENST00000569829 SHISA7A6NL88 538 aa11.29□□□□□ -0.6
RPAP1-212ENST00000569829 FAM170BA6NMN3 283 aa11.29□□□□□ -0.6
RPAP1-212ENST00000569829 ZBTB39O15060 712 aa11.29□□□□□ -0.6
RPAP1-212ENST00000569829 TBX3O15119 743 aa11.29□□□□□ -0.6
RPAP1-212ENST00000569829 LAMTOR5O43504 91 aa11.29□□□□□ -0.6
RPAP1-212ENST00000569829 SKIP12755 728 aa11.29□□□□□ -0.6
RPAP1-212ENST00000569829 IGFBP6P24592 240 aaPredicted RBP11.29□□□□□ -0.6
RPAP1-212ENST00000569829 TARSP26639 723 aaKnown RBP11.29□□□□□ -0.6
RPAP1-212ENST00000569829 RAB27AP51159 221 aa11.29□□□□□ -0.6
RPAP1-212ENST00000569829 CDC42EP1Q00587 391 aa11.29□□□□□ -0.6
RPAP1-212ENST00000569829 PPP2R5CQ13362 524 aa11.29□□□□□ -0.6
RPAP1-212ENST00000569829 SLC44A4Q53GD3 710 aa11.29□□□□□ -0.6
RPAP1-212ENST00000569829 RTP2Q5QGT7 225 aa11.29□□□□□ -0.6
RPAP1-212ENST00000569829 HASPINQ8TF76 798 aa11.29□□□□□ -0.6
RPAP1-212ENST00000569829 PRPF31Q8WWY3 499 aaKnown RBP11.29□□□□□ -0.6
RPAP1-212ENST00000569829 GTF3C6Q969F1 213 aa11.29□□□□□ -0.6
RPAP1-212ENST00000569829 KXD1Q9BQD3 176 aa11.29□□□□□ -0.6
RPAP1-212ENST00000569829 PLA2G2FQ9BZM2 168 aa11.29□□□□□ -0.6
RPAP1-212ENST00000569829 CXCL16Q9H2A7 254 aa11.29□□□□□ -0.6
RPAP1-212ENST00000569829 CHST7Q9NS84 486 aa11.29□□□□□ -0.6
RPAP1-212ENST00000569829 GJB4Q9NTQ9 266 aa11.29□□□□□ -0.6
RPAP1-212ENST00000569829 DDX25Q9UHL0 483 aaKnown RBP11.29□□□□□ -0.6
RPAP1-212ENST00000569829 USP18Q9UMW8 372 aa11.29□□□□□ -0.6
RPAP1-212ENST00000569829 SMG5Q9UPR3 1016 aaKnown RBP11.29□□□□□ -0.6
RPAP1-212ENST00000569829 IPPQ9Y573 584 aa11.29□□□□□ -0.6
RPAP1-212ENST00000569829 COL4A3BPQ9Y5P4 624 aa11.29□□□□□ -0.6
RPAP1-212ENST00000569829 TDRD15B5MCY1 1934 aaKnown RBP11.29□□□□□ -0.6
RPAP1-212ENST00000569829 WDFY3Q8IZQ1 3526 aa11.28□□□□□ -0.6
RPAP1-212ENST00000569829 CCDC194A0A1B0GVG4 234 aa11.28□□□□□ -0.6
RPAP1-212ENST00000569829 NRG2O14511 850 aaPredicted RBP11.28□□□□□ -0.6
RPAP1-212ENST00000569829 CCL16O15467 120 aa11.28□□□□□ -0.6
RPAP1-212ENST00000569829 ADAM12O43184 909 aa11.28□□□□□ -0.6
RPAP1-212ENST00000569829 SLC37A4O43826 429 aa11.28□□□□□ -0.6
RPAP1-212ENST00000569829 DTNBO60941 627 aa11.28□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms