RNA–Protein interactions for RNA: ENST00000569687.1

SF3B3-213, Transcript of splicing factor 3b subunit 3, humanhuman

TSL 4

Gene SF3B3, Length 333 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3-213ENST00000569687 TMEM150BA6NC51 233 aa5.83□□□□□ -1.48
SF3B3-213ENST00000569687 SOWAHBA6NEL2 793 aa5.83□□□□□ -1.48
SF3B3-213ENST00000569687 CCDC169A6NNP5 214 aa5.83□□□□□ -1.48
SF3B3-213ENST00000569687 ANKRD63C9JTQ0 380 aa5.83□□□□□ -1.48
SF3B3-213ENST00000569687 FOXN3O00409 490 aaPredicted RBP5.83□□□□□ -1.48
SF3B3-213ENST00000569687 ZNF185O15231 689 aa5.83□□□□□ -1.48
SF3B3-213ENST00000569687 ZC3H11AO75152 810 aaKnown RBP eCLIP5.83□□□□□ -1.48
SF3B3-213ENST00000569687 PALMO75781 387 aa5.83□□□□□ -1.48
SF3B3-213ENST00000569687 CNMDO75829 334 aa5.83□□□□□ -1.48
SF3B3-213ENST00000569687 CLSTN1O94985 981 aa5.83□□□□□ -1.48
SF3B3-213ENST00000569687 PIGRP01833 764 aa5.83□□□□□ -1.48
SF3B3-213ENST00000569687 TFRCP02786 760 aaKnown RBP5.83□□□□□ -1.48
SF3B3-213ENST00000569687 TMEM253P0C7T8 217 aa5.83□□□□□ -1.48
SF3B3-213ENST00000569687 ZBTB48P10074 688 aaPredicted RBP5.83□□□□□ -1.48
SF3B3-213ENST00000569687 GZMAP12544 262 aa5.83□□□□□ -1.48
SF3B3-213ENST00000569687 ATP4AP20648 1035 aa5.83□□□□□ -1.48
SF3B3-213ENST00000569687 PAFAH1B1P43034 410 aa5.83□□□□□ -1.48
SF3B3-213ENST00000569687 ALDH5A1P51649 535 aaPredicted RBP5.83□□□□□ -1.48
SF3B3-213ENST00000569687 VSNL1P62760 191 aa5.83□□□□□ -1.48
SF3B3-213ENST00000569687 MYL7Q01449 175 aa5.83□□□□□ -1.48
SF3B3-213ENST00000569687 ARID5AQ03989 594 aa5.83□□□□□ -1.48
SF3B3-213ENST00000569687 DMP1Q13316 513 aaPredicted RBP5.83□□□□□ -1.48
SF3B3-213ENST00000569687 PPIL2Q13356 520 aa5.83□□□□□ -1.48
SF3B3-213ENST00000569687 PRPF4BQ13523 1007 aaKnown RBP5.83□□□□□ -1.48
SF3B3-213ENST00000569687 MOGSQ13724 837 aa5.83□□□□□ -1.48
SF3B3-213ENST00000569687 RPS6KA1Q15418 735 aa5.83□□□□□ -1.48
SF3B3-213ENST00000569687 TARBP2Q15633 366 aaKnown RBP5.83□□□□□ -1.48
SF3B3-213ENST00000569687 PROX2Q3B8N5 592 aa5.83□□□□□ -1.48
SF3B3-213ENST00000569687 CFAP221Q4G0U5 840 aa5.83□□□□□ -1.48
SF3B3-213ENST00000569687 EAPPQ56P03 285 aaPredicted RBP5.83□□□□□ -1.48
SF3B3-213ENST00000569687 TREML2Q5T2D2 321 aa5.83□□□□□ -1.48
SF3B3-213ENST00000569687 LDLRAD1Q5T700 205 aa5.83□□□□□ -1.48
SF3B3-213ENST00000569687 TMEM164Q5U3C3 297 aa5.83□□□□□ -1.48
SF3B3-213ENST00000569687 PLA2G4FQ68DD2 849 aa5.83□□□□□ -1.48
SF3B3-213ENST00000569687 SLFN12LQ6IEE8 588 aa5.83□□□□□ -1.48
SF3B3-213ENST00000569687 CCDC70Q6NSX1 233 aa5.83□□□□□ -1.48
SF3B3-213ENST00000569687 MAEAQ7L5Y9 396 aa5.83□□□□□ -1.48
SF3B3-213ENST00000569687 FASTKD5Q7L8L6 764 aaKnown RBP5.83□□□□□ -1.48
SF3B3-213ENST00000569687 USP37Q86T82 979 aa5.83□□□□□ -1.48
SF3B3-213ENST00000569687 PNMA8AQ86V59 439 aaPredicted RBP5.83□□□□□ -1.48
SF3B3-213ENST00000569687 EXOC8Q8IYI6 725 aa5.83□□□□□ -1.48
SF3B3-213ENST00000569687 FAM71AQ8IYT1 594 aa5.83□□□□□ -1.48
SF3B3-213ENST00000569687 ANKRD13AQ8IZ07 590 aa5.83□□□□□ -1.48
SF3B3-213ENST00000569687 SYCE1Q8N0S2 351 aa5.83□□□□□ -1.48
SF3B3-213ENST00000569687 ANKRD35Q8N283 1001 aa5.83□□□□□ -1.48
SF3B3-213ENST00000569687 ANKRD13CQ8N6S4 541 aa5.83□□□□□ -1.48
SF3B3-213ENST00000569687 TPCN2Q8NHX9 752 aa5.83□□□□□ -1.48
SF3B3-213ENST00000569687 PLEKHO2Q8TD55 490 aa5.83□□□□□ -1.48
SF3B3-213ENST00000569687 MORC4Q8TE76 937 aa5.83□□□□□ -1.48
SF3B3-213ENST00000569687 AFAP1L1Q8TED9 768 aa5.83□□□□□ -1.48
SF3B3-213ENST00000569687 COG1Q8WTW3 980 aa5.83□□□□□ -1.48
SF3B3-213ENST00000569687 BSNDQ8WZ55 320 aa5.83□□□□□ -1.48
SF3B3-213ENST00000569687 IFT74Q96LB3 600 aa5.83□□□□□ -1.48
SF3B3-213ENST00000569687 CCDC43Q96MW1 224 aaKnown RBP5.83□□□□□ -1.48
SF3B3-213ENST00000569687 AGPAT1Q99943 283 aa5.83□□□□□ -1.48
SF3B3-213ENST00000569687 SPATC1LQ9H0A9 340 aa5.83□□□□□ -1.48
SF3B3-213ENST00000569687 TMEM117Q9H0C3 514 aa5.83□□□□□ -1.48
SF3B3-213ENST00000569687 ISCUQ9H1K1 167 aa5.83□□□□□ -1.48
SF3B3-213ENST00000569687 PORCNQ9H237 461 aa5.83□□□□□ -1.48
SF3B3-213ENST00000569687 DHX33Q9H6R0 707 aaKnown RBP5.83□□□□□ -1.48
SF3B3-213ENST00000569687 ATP6V0A4Q9HBG4 840 aa5.83□□□□□ -1.48
SF3B3-213ENST00000569687 TMEM8AQ9HCN3 771 aa5.83□□□□□ -1.48
SF3B3-213ENST00000569687 UBE2TQ9NPD8 197 aaPredicted RBP5.83□□□□□ -1.48
SF3B3-213ENST00000569687 GPRC5CQ9NQ84 441 aa5.83□□□□□ -1.48
SF3B3-213ENST00000569687 XPNPEP1Q9NQW7 623 aa5.83□□□□□ -1.48
SF3B3-213ENST00000569687 BTBD7Q9P203 1132 aa5.83□□□□□ -1.48
SF3B3-213ENST00000569687 SUCLA2Q9P2R7 463 aaPredicted RBP5.83□□□□□ -1.48
SF3B3-213ENST00000569687 TMEM59LQ9UK28 342 aa5.83□□□□□ -1.48
SF3B3-213ENST00000569687 ZMIZ1Q9ULJ6 1067 aa5.83□□□□□ -1.48
SF3B3-213ENST00000569687 TTC7AQ9ULT0 858 aaPredicted RBP5.83□□□□□ -1.48
SF3B3-213ENST00000569687 FZD1Q9UP38 647 aa5.83□□□□□ -1.48
SF3B3-213ENST00000569687 DIS3Q9Y2L1 958 aaKnown RBP5.83□□□□□ -1.48
SF3B3-213ENST00000569687 PHIPQ8WWQ0 1821 aa5.83□□□□□ -1.48
SF3B3-213ENST00000569687 NCANO14594 1321 aa5.82□□□□□ -1.48
SF3B3-213ENST00000569687 DNAJC25-GNG10A0A024R161 153 aa5.82□□□□□ -1.48
SF3B3-213ENST00000569687 ANKRD62A6NC57 917 aa5.82□□□□□ -1.48
SF3B3-213ENST00000569687 ZNF233A6NK53 670 aa5.82□□□□□ -1.48
SF3B3-213ENST00000569687 TISP43B9A030 160 aa5.82□□□□□ -1.48
SF3B3-213ENST00000569687 BUB1O43683 1085 aa5.82□□□□□ -1.48
SF3B3-213ENST00000569687 EXTL3O43909 919 aa5.82□□□□□ -1.48
SF3B3-213ENST00000569687 MAFO75444 373 aaPredicted RBP5.82□□□□□ -1.48
SF3B3-213ENST00000569687 LGR5O75473 907 aa5.82□□□□□ -1.48
SF3B3-213ENST00000569687 SASH3O75995 380 aa5.82□□□□□ -1.48
SF3B3-213ENST00000569687 MTA2O94776 668 aa5.82□□□□□ -1.48
SF3B3-213ENST00000569687 SEC31AO94979 1220 aaKnown RBP5.82□□□□□ -1.48
SF3B3-213ENST00000569687 ADRB2P07550 413 aa5.82□□□□□ -1.48
SF3B3-213ENST00000569687 RHOXF2BP0C7M4 288 aa5.82□□□□□ -1.48
SF3B3-213ENST00000569687 TRIM49P0CI25 452 aa5.82□□□□□ -1.48
SF3B3-213ENST00000569687 TRIM49CP0CI26 452 aa5.82□□□□□ -1.48
SF3B3-213ENST00000569687 TNFAIP3P21580 790 aa5.82□□□□□ -1.48
SF3B3-213ENST00000569687 TNFRSF8P28908 595 aa5.82□□□□□ -1.48
SF3B3-213ENST00000569687 GCLMP48507 274 aa5.82□□□□□ -1.48
SF3B3-213ENST00000569687 GALCP54803 685 aa5.82□□□□□ -1.48
SF3B3-213ENST00000569687 NAP1L1P55209 391 aaKnown RBP5.82□□□□□ -1.48
SF3B3-213ENST00000569687 DLG4P78352 724 aa5.82□□□□□ -1.48
SF3B3-213ENST00000569687 PRKCEQ02156 737 aa5.82□□□□□ -1.48
SF3B3-213ENST00000569687 CNTN2Q02246 1040 aa5.82□□□□□ -1.48
SF3B3-213ENST00000569687 CYP24A1Q07973 514 aa5.82□□□□□ -1.48
SF3B3-213ENST00000569687 FSTL1Q12841 308 aa5.82□□□□□ -1.48
SF3B3-213ENST00000569687 PLS1Q14651 629 aa5.82□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 58.1 ms