RNA–Protein interactions for RNA: ENST00000569243.5

UBR1-209, Transcript of ubiquitin protein ligase E3 component n-recognin 1, human

TSL 3

Gene UBR1, Length 702 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
UBR1-209	ENST00000569243	GAST	P01350	101 aa		4.95	□□□□□ -1.62
UBR1-209	ENST00000569243	LAG3	P18627	525 aa		4.95	□□□□□ -1.62
UBR1-209	ENST00000569243	DUSP2	Q05923	314 aa		4.95	□□□□□ -1.62
UBR1-209	ENST00000569243	SART3	Q15020	963 aa	Known RBP	4.95	□□□□□ -1.62
UBR1-209	ENST00000569243	TERF2	Q15554	542 aa		4.95	□□□□□ -1.62
UBR1-209	ENST00000569243	LMBR1L	Q6UX01	489 aa		4.95	□□□□□ -1.62
UBR1-209	ENST00000569243	NXPE1	Q8N323	547 aa		4.95	□□□□□ -1.62
UBR1-209	ENST00000569243	SUPT20H	Q8NEM7	779 aa		4.95	□□□□□ -1.62
UBR1-209	ENST00000569243	APPBP2	Q92624	585 aa		4.95	□□□□□ -1.62
UBR1-209	ENST00000569243	NELL1	Q92832	810 aa		4.95	□□□□□ -1.62
UBR1-209	ENST00000569243	FAM193B	Q96PV7	902 aa	Predicted RBP	4.95	□□□□□ -1.62
UBR1-209	ENST00000569243	FDXACB1	Q9BRP7	624 aa	Predicted RBP	4.95	□□□□□ -1.62
UBR1-209	ENST00000569243	SPATA5L1	Q9BVQ7	753 aa		4.95	□□□□□ -1.62
UBR1-209	ENST00000569243	THG1L	Q9NWX6	298 aa	Known RBP	4.95	□□□□□ -1.62
UBR1-209	ENST00000569243	HDAC5	Q9UQL6	1122 aa		4.95	□□□□□ -1.62
UBR1-209	ENST00000569243	CD2AP	Q9Y5K6	639 aa		4.95	□□□□□ -1.62
UBR1-209	ENST00000569243	DNAJC9-AS1	A6NH13	148 aa		4.94	□□□□□ -1.62
UBR1-209	ENST00000569243	TMEM200C	A6NKL6	621 aa		4.94	□□□□□ -1.62
UBR1-209	ENST00000569243	ZNF891	A8MT65	544 aa	Predicted RBP	4.94	□□□□□ -1.62
UBR1-209	ENST00000569243	AHRR	A9YTQ3	701 aa		4.94	□□□□□ -1.62
UBR1-209	ENST00000569243	SCAF4	O95104	1147 aa	Known RBP	4.94	□□□□□ -1.62
UBR1-209	ENST00000569243	C1R	P00736	705 aa		4.94	□□□□□ -1.62
UBR1-209	ENST00000569243	HK1	P19367	917 aa		4.94	□□□□□ -1.62
UBR1-209	ENST00000569243	BMPR1A	P36894	532 aa		4.94	□□□□□ -1.62
UBR1-209	ENST00000569243	CASR	P41180	1078 aa		4.94	□□□□□ -1.62
UBR1-209	ENST00000569243	USP14	P54578	494 aa		4.94	□□□□□ -1.62
UBR1-209	ENST00000569243	ZBTB41	Q5SVQ8	909 aa		4.94	□□□□□ -1.62
UBR1-209	ENST00000569243	NPM2	Q86SE8	214 aa	Known RBP	4.94	□□□□□ -1.62
UBR1-209	ENST00000569243	NIM1K	Q8IY84	436 aa		4.94	□□□□□ -1.62
UBR1-209	ENST00000569243		Q8N9P0	234 aa	Predicted RBP	4.94	□□□□□ -1.62
UBR1-209	ENST00000569243	BOLL	Q8N9W6	283 aa	Known RBP	4.94	□□□□□ -1.62
UBR1-209	ENST00000569243	LSM14B	Q9BX40	385 aa	Known RBP	4.94	□□□□□ -1.62
UBR1-209	ENST00000569243	CPEB1	Q9BZB8	566 aa	Known RBP	4.94	□□□□□ -1.62
UBR1-209	ENST00000569243	EPC1	Q9H2F5	836 aa		4.94	□□□□□ -1.62
UBR1-209	ENST00000569243	EIF2B4	Q9UI10	523 aa	Known RBP	4.94	□□□□□ -1.62
UBR1-209	ENST00000569243	PRSS50	Q9UI38	385 aa		4.94	□□□□□ -1.62
UBR1-209	ENST00000569243	TMPRSS11E	Q9UL52	423 aa		4.94	□□□□□ -1.62
UBR1-209	ENST00000569243	PRSS38	A1L453	326 aa		4.93	□□□□□ -1.62
UBR1-209	ENST00000569243		B5MCH6	92 aa		4.93	□□□□□ -1.62
UBR1-209	ENST00000569243	RNASET2	O00584	256 aa	Known RBP	4.93	□□□□□ -1.62
UBR1-209	ENST00000569243	LTA4H	P09960	611 aa	Known RBP	4.93	□□□□□ -1.62
UBR1-209	ENST00000569243	HSP90B1	P14625	803 aa	Known RBP	4.93	□□□□□ -1.62
UBR1-209	ENST00000569243	MGAT1	P26572	445 aa		4.93	□□□□□ -1.62
UBR1-209	ENST00000569243	FOXF2	Q12947	444 aa		4.93	□□□□□ -1.62
UBR1-209	ENST00000569243	FAM214A	Q32MH5	1076 aa		4.93	□□□□□ -1.62
UBR1-209	ENST00000569243	C11orf74	Q86VG3	221 aa		4.93	□□□□□ -1.62
UBR1-209	ENST00000569243	CXorf67	Q86X51	503 aa	Predicted RBP	4.93	□□□□□ -1.62
UBR1-209	ENST00000569243	SLC41A1	Q8IVJ1	513 aa		4.93	□□□□□ -1.62
UBR1-209	ENST00000569243	ARHGEF19	Q8IW93	802 aa		4.93	□□□□□ -1.62
UBR1-209	ENST00000569243	OR2W6P	Q8NHA6	318 aa		4.93	□□□□□ -1.62
UBR1-209	ENST00000569243	OR14C36	Q8NHC7	312 aa		4.93	□□□□□ -1.62
UBR1-209	ENST00000569243	FEZ1	Q99689	392 aa		4.93	□□□□□ -1.62
UBR1-209	ENST00000569243	XPO5	Q9HAV4	1204 aa	Known RBP eCLIP	4.93	□□□□□ -1.62
UBR1-209	ENST00000569243	DKK2	Q9UBU2	259 aa		4.93	□□□□□ -1.62
UBR1-209	ENST00000569243	USP18	Q9UMW8	372 aa		4.93	□□□□□ -1.62
UBR1-209	ENST00000569243	CHST2	Q9Y4C5	530 aa		4.93	□□□□□ -1.62
UBR1-209	ENST00000569243	PRR5-ARHGAP8	B1AHC4	643 aa		4.92	□□□□□ -1.62
UBR1-209	ENST00000569243	ZFP36	P26651	326 aa	Known RBP	4.92	□□□□□ -1.62
UBR1-209	ENST00000569243	ABCG1	P45844	678 aa		4.92	□□□□□ -1.62
UBR1-209	ENST00000569243	MANF	P55145	182 aa	Known RBP	4.92	□□□□□ -1.62
UBR1-209	ENST00000569243	BLOC1S1	P78537	153 aa		4.92	□□□□□ -1.62
UBR1-209	ENST00000569243	UBE3C	Q15386	1083 aa		4.92	□□□□□ -1.62
UBR1-209	ENST00000569243	GJC2	Q5T442	439 aa	Predicted RBP	4.92	□□□□□ -1.62
UBR1-209	ENST00000569243	GDF7	Q7Z4P5	450 aa		4.92	□□□□□ -1.62
UBR1-209	ENST00000569243	RASSF3	Q86WH2	238 aa		4.92	□□□□□ -1.62
UBR1-209	ENST00000569243	PLXDC1	Q8IUK5	500 aa		4.92	□□□□□ -1.62
UBR1-209	ENST00000569243	LYSMD2	Q8IV50	215 aa		4.92	□□□□□ -1.62
UBR1-209	ENST00000569243	COQ10A	Q96MF6	247 aa		4.92	□□□□□ -1.62
UBR1-209	ENST00000569243	LRFN3	Q9BTN0	628 aa		4.92	□□□□□ -1.62
UBR1-209	ENST00000569243	POLR2A	P24928	1970 aa	Known RBP	4.91	□□□□□ -1.62
UBR1-209	ENST00000569243	SETD1B	Q9UPS6	1966 aa	Known RBP	4.91	□□□□□ -1.62
UBR1-209	ENST00000569243	CENPVL1	A0A0U1RR11	272 aa		4.91	□□□□□ -1.62
UBR1-209	ENST00000569243	CFB	P00751	764 aa		4.91	□□□□□ -1.62
UBR1-209	ENST00000569243	ZEB1	P37275	1124 aa	Predicted RBP	4.91	□□□□□ -1.62
UBR1-209	ENST00000569243	ELL	P55199	621 aa	Predicted RBP	4.91	□□□□□ -1.62
UBR1-209	ENST00000569243	PCBP1	Q15365	356 aa	Known RBP eCLIP	4.91	□□□□□ -1.62
UBR1-209	ENST00000569243	ARMC6	Q6NXE6	501 aa		4.91	□□□□□ -1.62
UBR1-209	ENST00000569243	PDZD4	Q76G19	769 aa	Predicted RBP	4.91	□□□□□ -1.62
UBR1-209	ENST00000569243	SRRM1	Q8IYB3	904 aa	Known RBP	4.91	□□□□□ -1.62
UBR1-209	ENST00000569243	MSL3	Q8N5Y2	521 aa	Known RBP	4.91	□□□□□ -1.62
UBR1-209	ENST00000569243	LILRA3	Q8N6C8	439 aa	Predicted RBP	4.91	□□□□□ -1.62
UBR1-209	ENST00000569243	FAM98A	Q8NCA5	519 aa	Known RBP	4.91	□□□□□ -1.62
UBR1-209	ENST00000569243	MFSD3	Q96ES6	412 aa		4.91	□□□□□ -1.62
UBR1-209	ENST00000569243	SERHL2	Q9H4I8	314 aa		4.91	□□□□□ -1.62
UBR1-209	ENST00000569243	SPTLC3	Q9NUV7	552 aa		4.91	□□□□□ -1.62
UBR1-209	ENST00000569243	LPXN	O60711	386 aa		4.9	□□□□□ -1.63
UBR1-209	ENST00000569243	FKBP9	O95302	570 aa		4.9	□□□□□ -1.63
UBR1-209	ENST00000569243	HLA-DOA	P06340	250 aa		4.9	□□□□□ -1.63
UBR1-209	ENST00000569243	RBP3	P10745	1247 aa		4.9	□□□□□ -1.63
UBR1-209	ENST00000569243	ZSCAN20	P17040	1043 aa	Predicted RBP	4.9	□□□□□ -1.63
UBR1-209	ENST00000569243	TYRP1	P17643	537 aa		4.9	□□□□□ -1.63
UBR1-209	ENST00000569243	ADCYAP1R1	P41586	468 aa		4.9	□□□□□ -1.63
UBR1-209	ENST00000569243	APBA1	Q02410	837 aa		4.9	□□□□□ -1.63
UBR1-209	ENST00000569243	MGAT5	Q09328	741 aa		4.9	□□□□□ -1.63
UBR1-209	ENST00000569243	TKFC	Q3LXA3	575 aa		4.9	□□□□□ -1.63
UBR1-209	ENST00000569243	KRTAP5-1	Q6L8H4	278 aa		4.9	□□□□□ -1.63
UBR1-209	ENST00000569243	CNNM4	Q6P4Q7	775 aa		4.9	□□□□□ -1.63
UBR1-209	ENST00000569243	FKBP9P1	Q75LS8	142 aa		4.9	□□□□□ -1.63
UBR1-209	ENST00000569243	KIAA0907	Q7Z7F0	614 aa	Predicted RBP	4.9	□□□□□ -1.63
UBR1-209	ENST00000569243	SNX33	Q8WV41	574 aa		4.9	□□□□□ -1.63

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