RNA–Protein interactions for RNA: ENST00000569240.5

CNOT1-216, Transcript of CCR4-NOT transcription complex subunit 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CNOT1, Length 7,660 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT1-216ENST00000569240 POLD1P28340 1107 aa7.52□□□□□ -1.21
CNOT1-216ENST00000569240 PDCD4Q53EL6 469 aaKnown RBP7.52□□□□□ -1.21
CNOT1-216ENST00000569240 DNAJC24Q6P3W2 148 aa7.52□□□□□ -1.21
CNOT1-216ENST00000569240 LPCAT2Q7L5N7 544 aa7.52□□□□□ -1.21
CNOT1-216ENST00000569240 TRIM74Q86UV6 250 aa7.52□□□□□ -1.21
CNOT1-216ENST00000569240 TRIM73Q86UV7 250 aa7.52□□□□□ -1.21
CNOT1-216ENST00000569240 LRRC34Q8IZ02 419 aa7.52□□□□□ -1.21
CNOT1-216ENST00000569240 PHACTR3Q96KR7 559 aa7.52□□□□□ -1.21
CNOT1-216ENST00000569240 NDNQ99608 321 aa7.52□□□□□ -1.21
CNOT1-216ENST00000569240 AP1M1Q9BXS5 423 aa7.52□□□□□ -1.21
CNOT1-216ENST00000569240 RAPGEF6Q8TEU7 1601 aa7.52□□□□□ -1.21
CNOT1-216ENST00000569240 KIAA0391O15091 583 aaKnown RBP7.52□□□□□ -1.21
CNOT1-216ENST00000569240 DGUOKQ16854 277 aa7.52□□□□□ -1.21
CNOT1-216ENST00000569240 LRRC74BQ6ZQY2 392 aa7.52□□□□□ -1.21
CNOT1-216ENST00000569240 SNRNP27Q8WVK2 155 aaKnown RBP7.52□□□□□ -1.21
CNOT1-216ENST00000569240 ANKRD36BP1Q96IX9 119 aa7.52□□□□□ -1.21
CNOT1-216ENST00000569240 LZTS1Q9Y250 596 aa7.52□□□□□ -1.21
CNOT1-216ENST00000569240 ESYT2A0FGR8 921 aa7.52□□□□□ -1.21
CNOT1-216ENST00000569240 LRRC53A6NM62 1247 aa7.52□□□□□ -1.21
CNOT1-216ENST00000569240 TMEM253P0C7T8 217 aa7.52□□□□□ -1.21
CNOT1-216ENST00000569240 GRK2P25098 689 aa7.52□□□□□ -1.21
CNOT1-216ENST00000569240 ALX1Q15699 326 aa7.52□□□□□ -1.21
CNOT1-216ENST00000569240 CCDC103Q8IW40 242 aa7.52□□□□□ -1.21
CNOT1-216ENST00000569240 TRIM59Q8IWR1 403 aa7.52□□□□□ -1.21
CNOT1-216ENST00000569240 LRRC59Q96AG4 307 aaKnown RBP7.52□□□□□ -1.21
CNOT1-216ENST00000569240 MPP4Q96JB8 637 aa7.52□□□□□ -1.21
CNOT1-216ENST00000569240 CCSER1Q9C0I3 900 aa7.52□□□□□ -1.21
CNOT1-216ENST00000569240 STN1Q9H668 368 aaKnown RBP7.52□□□□□ -1.21
CNOT1-216ENST00000569240 EMILIN3Q9NT22 766 aa7.52□□□□□ -1.21
CNOT1-216ENST00000569240 FBXO28Q9NVF7 368 aa7.52□□□□□ -1.21
CNOT1-216ENST00000569240 HESX1Q9UBX0 185 aa7.52□□□□□ -1.21
CNOT1-216ENST00000569240 APPL1Q9UKG1 709 aa7.52□□□□□ -1.21
CNOT1-216ENST00000569240 CFAP99D6REC4 459 aa7.51□□□□□ -1.21
CNOT1-216ENST00000569240 CNOT3O75175 753 aaKnown RBP7.51□□□□□ -1.21
CNOT1-216ENST00000569240 PEX5P50542 639 aa7.51□□□□□ -1.21
CNOT1-216ENST00000569240 NAALADL2Q58DX5 795 aa7.51□□□□□ -1.21
CNOT1-216ENST00000569240 GPATCH4Q5T3I0 446 aaKnown RBP7.51□□□□□ -1.21
CNOT1-216ENST00000569240 KRT35Q92764 455 aa7.51□□□□□ -1.21
CNOT1-216ENST00000569240 ANKZF1Q9H8Y5 726 aa7.51□□□□□ -1.21
CNOT1-216ENST00000569240 SLC39A2Q9NP94 309 aa7.51□□□□□ -1.21
CNOT1-216ENST00000569240 TBK1Q9UHD2 729 aa7.51□□□□□ -1.21
CNOT1-216ENST00000569240 MYRFQ9Y2G1 1151 aa7.51□□□□□ -1.21
CNOT1-216ENST00000569240 AK5Q9Y6K8 562 aa7.51□□□□□ -1.21
CNOT1-216ENST00000569240 LDHBP07195 334 aaKnown RBP7.51□□□□□ -1.21
CNOT1-216ENST00000569240 UBTFL6P0CB48 400 aaPredicted RBP7.51□□□□□ -1.21
CNOT1-216ENST00000569240 CLK1P49759 484 aaKnown RBP7.51□□□□□ -1.21
CNOT1-216ENST00000569240 SEC24CP53992 1094 aa7.51□□□□□ -1.21
CNOT1-216ENST00000569240 SNRPFP62306 86 aaKnown RBP7.51□□□□□ -1.21
CNOT1-216ENST00000569240 ASPRV1Q53RT3 343 aa7.51□□□□□ -1.21
CNOT1-216ENST00000569240 RUNDC3AQ59EK9 446 aa7.51□□□□□ -1.21
CNOT1-216ENST00000569240 IFNL3Q8IZI9 196 aa7.51□□□□□ -1.21
CNOT1-216ENST00000569240 ZCCHC7Q8N3Z6 543 aaKnown RBP7.51□□□□□ -1.21
CNOT1-216ENST00000569240 ATP8B4Q8TF62 1192 aa7.51□□□□□ -1.21
CNOT1-216ENST00000569240 TBRG4Q969Z0 631 aaKnown RBP eCLIP7.51□□□□□ -1.214e-8■■■■■ 70.2
CNOT1-216ENST00000569240 EAF2Q96CJ1 260 aaPredicted RBP7.51□□□□□ -1.21
CNOT1-216ENST00000569240 RMND5BQ96G75 393 aaPredicted RBP7.51□□□□□ -1.21
CNOT1-216ENST00000569240 PLEKHF1Q96S99 279 aa7.51□□□□□ -1.21
CNOT1-216ENST00000569240 PLIN2Q99541 437 aa7.51□□□□□ -1.21
CNOT1-216ENST00000569240 DDX47Q9H0S4 455 aaKnown RBP7.51□□□□□ -1.21
CNOT1-216ENST00000569240 PTTG2Q9NZH5 202 aa7.51□□□□□ -1.21
CNOT1-216ENST00000569240 ENOPH1Q9UHY7 261 aa7.51□□□□□ -1.21
CNOT1-216ENST00000569240 GTPBP10A4D1E9 387 aaKnown RBP7.51□□□□□ -1.21
CNOT1-216ENST00000569240 TRPC5OSA6NMA1 111 aa7.51□□□□□ -1.21
CNOT1-216ENST00000569240 ABCB1P08183 1280 aaPredicted RBP7.51□□□□□ -1.21
CNOT1-216ENST00000569240 ADD1P35611 737 aaKnown RBP7.51□□□□□ -1.21
CNOT1-216ENST00000569240 THOC5Q13769 683 aaKnown RBP7.51□□□□□ -1.21
CNOT1-216ENST00000569240 PRMT9Q6P2P2 845 aa7.51□□□□□ -1.21
CNOT1-216ENST00000569240 RFX6Q8HWS3 928 aa7.51□□□□□ -1.21
CNOT1-216ENST00000569240 CDKL3Q8IVW4 592 aaPredicted RBP7.51□□□□□ -1.21
CNOT1-216ENST00000569240 SH2D3CQ8N5H7 860 aa7.51□□□□□ -1.21
CNOT1-216ENST00000569240 ITPKCQ96DU7 683 aa7.51□□□□□ -1.21
CNOT1-216ENST00000569240 PNKPQ96T60 521 aa7.51□□□□□ -1.21
CNOT1-216ENST00000569240 BTBD10Q9BSF8 475 aa7.51□□□□□ -1.21
CNOT1-216ENST00000569240 TRIM45Q9H8W5 580 aaPredicted RBP7.51□□□□□ -1.21
CNOT1-216ENST00000569240 PSMD3O43242 534 aa7.51□□□□□ -1.21
CNOT1-216ENST00000569240 FGAP02671 866 aa7.51□□□□□ -1.21
CNOT1-216ENST00000569240 ALBP02768 609 aa7.51□□□□□ -1.21
CNOT1-216ENST00000569240 EDRF1Q3B7T1 1238 aa7.51□□□□□ -1.21
CNOT1-216ENST00000569240 SPOPLQ6IQ16 392 aa7.51□□□□□ -1.21
CNOT1-216ENST00000569240 FAM9CQ8IZT9 166 aa7.51□□□□□ -1.21
CNOT1-216ENST00000569240 FNIP1Q8TF40 1166 aa7.51□□□□□ -1.21
CNOT1-216ENST00000569240 GPR101Q96P66 508 aaPredicted RBP7.51□□□□□ -1.21
CNOT1-216ENST00000569240 CLEC4MQ9H2X3 399 aaPredicted RBP7.51□□□□□ -1.21
CNOT1-216ENST00000569240 SMYD3Q9H7B4 428 aa7.51□□□□□ -1.21
CNOT1-216ENST00000569240 GRID1Q9ULK0 1009 aa7.51□□□□□ -1.21
CNOT1-216ENST00000569240 PLAGL2Q9UPG8 496 aa7.51□□□□□ -1.21
CNOT1-216ENST00000569240 HPS5Q9UPZ3 1129 aa7.51□□□□□ -1.21
CNOT1-216ENST00000569240 MBD5Q9P267 1494 aa7.51□□□□□ -1.21
CNOT1-216ENST00000569240 TYW5A2RUC4 315 aaKnown RBP7.51□□□□□ -1.21
CNOT1-216ENST00000569240 CD19P15391 556 aa7.51□□□□□ -1.21
CNOT1-216ENST00000569240 SGSM1Q2NKQ1 1148 aa7.51□□□□□ -1.21
CNOT1-216ENST00000569240 LRRC6Q86X45 466 aa7.51□□□□□ -1.21
CNOT1-216ENST00000569240 DRAXINQ8NBI3 349 aaPredicted RBP7.51□□□□□ -1.21
CNOT1-216ENST00000569240 ENGASEQ8NFI3 743 aa7.51□□□□□ -1.21
CNOT1-216ENST00000569240 IP6K2Q9UHH9 426 aa7.51□□□□□ -1.21
CNOT1-216ENST00000569240 ACEP12821 1306 aa7.51□□□□□ -1.21
CNOT1-216ENST00000569240 MROH7Q68CQ1 1323 aa7.51□□□□□ -1.21
CNOT1-216ENST00000569240 PRDM15P57071 1507 aaPredicted RBP7.51□□□□□ -1.21
CNOT1-216ENST00000569240 TIMM50Q3ZCQ8 353 aa7.51□□□□□ -1.21
CNOT1-216ENST00000569240 RAPH1Q70E73 1250 aa7.51□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 68.3 ms