RNA–Protein interactions for RNA: ENST00000569136.5

CAPN3-219, Transcript of calpain 3, humanhuman

TSL 2 BASIC

Gene CAPN3, Length 1,029 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-219ENST00000569136 SPATA31C1P0DKV0 1188 aa10.22□□□□□ -0.77
CAPN3-219ENST00000569136 DARSP14868 501 aaKnown RBP10.22□□□□□ -0.77
CAPN3-219ENST00000569136 POLGP54098 1239 aaPredicted RBP10.22□□□□□ -0.77
CAPN3-219ENST00000569136 NPEPPSP55786 919 aa10.22□□□□□ -0.77
CAPN3-219ENST00000569136 FAM189BP81408 668 aa10.22□□□□□ -0.77
CAPN3-219ENST00000569136 DEFB103AP81534 67 aa10.22□□□□□ -0.77
CAPN3-219ENST00000569136 HTRA4P83105 476 aaPredicted RBP10.22□□□□□ -0.77
CAPN3-219ENST00000569136 CYP4A11Q02928 519 aa10.22□□□□□ -0.77
CAPN3-219ENST00000569136 GRIN2CQ14957 1233 aa10.22□□□□□ -0.77
CAPN3-219ENST00000569136 TCTN1Q2MV58 587 aa10.22□□□□□ -0.77
CAPN3-219ENST00000569136 SLC24A5Q71RS6 500 aa10.22□□□□□ -0.77
CAPN3-219ENST00000569136 SV2AQ7L0J3 742 aa10.22□□□□□ -0.77
CAPN3-219ENST00000569136 CATSPER3Q86XQ3 398 aa10.22□□□□□ -0.77
CAPN3-219ENST00000569136 HSCBQ8IWL3 235 aa10.22□□□□□ -0.77
CAPN3-219ENST00000569136 LRRC71Q8N4P6 559 aa10.22□□□□□ -0.77
CAPN3-219ENST00000569136 PRPF31Q8WWY3 499 aaKnown RBP10.22□□□□□ -0.77
CAPN3-219ENST00000569136 PSPC1Q8WXF1 523 aaKnown RBP10.22□□□□□ -0.77
CAPN3-219ENST00000569136 FAM161BQ96MY7 647 aa10.22□□□□□ -0.77
CAPN3-219ENST00000569136 SCLT1Q96NL6 688 aa10.22□□□□□ -0.77
CAPN3-219ENST00000569136 YME1L1Q96TA2 773 aa10.22□□□□□ -0.77
CAPN3-219ENST00000569136 OSBPL7Q9BZF2 842 aa10.22□□□□□ -0.77
CAPN3-219ENST00000569136 ERVK-5Q9HDB9 667 aa10.22□□□□□ -0.77
CAPN3-219ENST00000569136 DBR1Q9UK59 544 aaKnown RBP10.22□□□□□ -0.77
CAPN3-219ENST00000569136 NOC2LQ9Y3T9 749 aaKnown RBP10.22□□□□□ -0.77
CAPN3-219ENST00000569136 PCDHB7Q9Y5E2 793 aa10.22□□□□□ -0.77
CAPN3-219ENST00000569136 PCDHB6Q9Y5E3 794 aa10.22□□□□□ -0.77
CAPN3-219ENST00000569136 SZT2Q5T011 3432 aa10.21□□□□□ -0.77
CAPN3-219ENST00000569136 H3BM21 787 aa10.21□□□□□ -0.77
CAPN3-219ENST00000569136 CA3P07451 260 aa10.21□□□□□ -0.77
CAPN3-219ENST00000569136 MYOGP15173 224 aa10.21□□□□□ -0.77
CAPN3-219ENST00000569136 GPC3P51654 580 aa10.21□□□□□ -0.77
CAPN3-219ENST00000569136 ATP2C1P98194 919 aaPredicted RBP10.21□□□□□ -0.77
CAPN3-219ENST00000569136 TAP1Q03518 808 aa10.21□□□□□ -0.77
CAPN3-219ENST00000569136 NCBP1Q09161 790 aaKnown RBP10.21□□□□□ -0.77
CAPN3-219ENST00000569136 TFDP1Q14186 410 aa10.21□□□□□ -0.77
CAPN3-219ENST00000569136 DBN1Q16643 649 aa10.21□□□□□ -0.77
CAPN3-219ENST00000569136 KRT79Q5XKE5 535 aa10.21□□□□□ -0.77
CAPN3-219ENST00000569136 SRGAP1Q7Z6B7 1085 aa10.21□□□□□ -0.77
CAPN3-219ENST00000569136 RTN4RL1Q86UN2 441 aaPredicted RBP10.21□□□□□ -0.77
CAPN3-219ENST00000569136 RHPN2Q8IUC4 686 aa10.21□□□□□ -0.77
CAPN3-219ENST00000569136 NPAS4Q8IUM7 802 aa10.21□□□□□ -0.77
CAPN3-219ENST00000569136 IGSF22Q8N9C0 903 aa10.21□□□□□ -0.77
CAPN3-219ENST00000569136 GUCD1Q96NT3 240 aa10.21□□□□□ -0.77
CAPN3-219ENST00000569136 SAMD11Q96NU1 681 aa10.21□□□□□ -0.77
CAPN3-219ENST00000569136 TGS1Q96RS0 853 aaKnown RBP10.21□□□□□ -0.77
CAPN3-219ENST00000569136 OSMRQ99650 979 aa10.21□□□□□ -0.77
CAPN3-219ENST00000569136 ADAM2Q99965 735 aa10.21□□□□□ -0.77
CAPN3-219ENST00000569136 ZSCAN16Q9H4T2 348 aaPredicted RBP10.21□□□□□ -0.77
CAPN3-219ENST00000569136 RGS18Q9NS28 235 aa10.21□□□□□ -0.77
CAPN3-219ENST00000569136 DACT1Q9NYF0 836 aa10.21□□□□□ -0.77
CAPN3-219ENST00000569136 WRAP73Q9P2S5 460 aaPredicted RBP10.21□□□□□ -0.77
CAPN3-219ENST00000569136 KCNG1Q9UIX4 513 aa10.21□□□□□ -0.77
CAPN3-219ENST00000569136 LRFN2Q9ULH4 789 aa10.21□□□□□ -0.77
CAPN3-219ENST00000569136 DNM3Q9UQ16 869 aa10.21□□□□□ -0.77
CAPN3-219ENST00000569136 RWDD3Q9Y3V2 267 aa10.21□□□□□ -0.77
CAPN3-219ENST00000569136 MYO9BQ13459 2157 aa10.21□□□□□ -0.78
CAPN3-219ENST00000569136 A0A1W2PNR3 127 aa10.2□□□□□ -0.78
CAPN3-219ENST00000569136 ZBTB39O15060 712 aa10.2□□□□□ -0.78
CAPN3-219ENST00000569136 EOMESO95936 686 aa10.2□□□□□ -0.78
CAPN3-219ENST00000569136 HSP90AA1P07900 732 aaKnown RBP10.2□□□□□ -0.78
CAPN3-219ENST00000569136 POU3F3P20264 500 aaPredicted RBP10.2□□□□□ -0.78
CAPN3-219ENST00000569136 SYT1P21579 422 aa10.2□□□□□ -0.78
CAPN3-219ENST00000569136 SFPQP23246 707 aaKnown RBP eCLIP10.2□□□□□ -0.78
CAPN3-219ENST00000569136 CCT6AP40227 531 aaKnown RBP10.2□□□□□ -0.78
CAPN3-219ENST00000569136 SARSP49591 514 aaKnown RBP10.2□□□□□ -0.78
CAPN3-219ENST00000569136 RARRES1P49788 294 aa10.2□□□□□ -0.78
CAPN3-219ENST00000569136 ERVK-21P61565 698 aa10.2□□□□□ -0.78
CAPN3-219ENST00000569136 LAMTOR4Q0VGL1 99 aa10.2□□□□□ -0.78
CAPN3-219ENST00000569136 NAA30Q147X3 362 aaPredicted RBP10.2□□□□□ -0.78
CAPN3-219ENST00000569136 EMC2Q15006 297 aa10.2□□□□□ -0.78
CAPN3-219ENST00000569136 PLA2G4FQ68DD2 849 aa10.2□□□□□ -0.78
CAPN3-219ENST00000569136 FAM117BQ6P1L5 589 aa10.2□□□□□ -0.78
CAPN3-219ENST00000569136 FOXR1Q6PIV2 292 aa10.2□□□□□ -0.78
CAPN3-219ENST00000569136 NPAS3Q8IXF0 933 aa10.2□□□□□ -0.78
CAPN3-219ENST00000569136 MCPH1Q8NEM0 835 aa10.2□□□□□ -0.78
CAPN3-219ENST00000569136 RSPH1Q8WYR4 309 aa10.2□□□□□ -0.78
CAPN3-219ENST00000569136 GTPBP3Q969Y2 492 aaKnown RBP10.2□□□□□ -0.78
CAPN3-219ENST00000569136 AK8Q96MA6 479 aa10.2□□□□□ -0.78
CAPN3-219ENST00000569136 TMX1Q9H3N1 280 aa10.2□□□□□ -0.78
CAPN3-219ENST00000569136 ELAC1Q9H777 363 aaKnown RBP10.2□□□□□ -0.78
CAPN3-219ENST00000569136 ATP6V0A4Q9HBG4 840 aa10.2□□□□□ -0.78
CAPN3-219ENST00000569136 LMCD1Q9NZU5 365 aa10.2□□□□□ -0.78
CAPN3-219ENST00000569136 COL4A3BPQ9Y5P4 624 aa10.2□□□□□ -0.78
CAPN3-219ENST00000569136 A0A087WZ62 844 aa10.19□□□□□ -0.78
CAPN3-219ENST00000569136 LINC01553A4QN01 128 aa10.19□□□□□ -0.78
CAPN3-219ENST00000569136 VPS37CA5D8V6 355 aaPredicted RBP10.19□□□□□ -0.78
CAPN3-219ENST00000569136 TMEM150BA6NC51 233 aa10.19□□□□□ -0.78
CAPN3-219ENST00000569136 MED24O75448 989 aa10.19□□□□□ -0.78
CAPN3-219ENST00000569136 RB1P06400 928 aa10.19□□□□□ -0.78
CAPN3-219ENST00000569136 SRGAP2CP0DJJ0 459 aa10.19□□□□□ -0.78
CAPN3-219ENST00000569136 FOSL2P15408 326 aa10.19□□□□□ -0.78
CAPN3-219ENST00000569136 CYP11B2P19099 503 aa10.19□□□□□ -0.78
CAPN3-219ENST00000569136 DSC3Q14574 896 aa10.19□□□□□ -0.78
CAPN3-219ENST00000569136 LRRC69Q6ZNQ3 347 aa10.19□□□□□ -0.78
CAPN3-219ENST00000569136 FERMT3Q86UX7 667 aa10.19□□□□□ -0.78
CAPN3-219ENST00000569136 FAM228AQ86W67 206 aa10.19□□□□□ -0.78
CAPN3-219ENST00000569136 FIBCD1Q8N539 461 aa10.19□□□□□ -0.78
CAPN3-219ENST00000569136 PIGOQ8TEQ8 1089 aa10.19□□□□□ -0.78
CAPN3-219ENST00000569136 TMEM40Q8WWA1 233 aa10.19□□□□□ -0.78
CAPN3-219ENST00000569136 TMEM143Q96AN5 459 aa10.19□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms