RNA–Protein interactions for RNA: ENST00000569001.1

BBS4-215, Transcript of Bardet-Biedl syndrome 4, human

TSL 3

Gene BBS4, Length 349 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
BBS4-215	ENST00000569001	BTNL9	Q6UXG8	535 aa		4.26	□□□□□ -1.73
BBS4-215	ENST00000569001	FAM83A	Q86UY5	434 aa		4.26	□□□□□ -1.73
BBS4-215	ENST00000569001	AFAP1L2	Q8N4X5	818 aa		4.26	□□□□□ -1.73
BBS4-215	ENST00000569001	OR10H5	Q8NGA6	315 aa		4.26	□□□□□ -1.73
BBS4-215	ENST00000569001	RIN2	Q8WYP3	895 aa	Predicted RBP	4.26	□□□□□ -1.73
BBS4-215	ENST00000569001	HAS1	Q92839	578 aa		4.26	□□□□□ -1.73
BBS4-215	ENST00000569001	PHACTR3	Q96KR7	559 aa		4.26	□□□□□ -1.73
BBS4-215	ENST00000569001	FAM193B	Q96PV7	902 aa	Predicted RBP	4.26	□□□□□ -1.73
BBS4-215	ENST00000569001	AGAP2	Q99490	1192 aa		4.26	□□□□□ -1.73
BBS4-215	ENST00000569001	NDC1	Q9BTX1	674 aa		4.26	□□□□□ -1.73
BBS4-215	ENST00000569001	KCNH6	Q9H252	994 aa		4.26	□□□□□ -1.73
BBS4-215	ENST00000569001	C14orf119	Q9NWQ9	140 aa		4.26	□□□□□ -1.73
BBS4-215	ENST00000569001	ANKFY1	Q9P2R3	1169 aa		4.26	□□□□□ -1.73
BBS4-215	ENST00000569001	TMA7	Q9Y2S6	64 aa	Known RBP	4.26	□□□□□ -1.73
BBS4-215	ENST00000569001	PRR5-ARHGAP8	B1AHC4	643 aa		4.25	□□□□□ -1.73
BBS4-215	ENST00000569001	AKR1B10	O60218	316 aa		4.25	□□□□□ -1.73
BBS4-215	ENST00000569001	ZEB2	O60315	1214 aa		4.25	□□□□□ -1.73
BBS4-215	ENST00000569001	PTPN7	P35236	360 aa		4.25	□□□□□ -1.73
BBS4-215	ENST00000569001	INHBC	P55103	352 aa		4.25	□□□□□ -1.73
BBS4-215	ENST00000569001	SESN3	P58005	492 aa		4.25	□□□□□ -1.73
BBS4-215	ENST00000569001	NHLH2	Q02577	135 aa		4.25	□□□□□ -1.73
BBS4-215	ENST00000569001	CCDC178	Q5BJE1	867 aa		4.25	□□□□□ -1.73
BBS4-215	ENST00000569001	CT47A1	Q5JQC4	288 aa	Predicted RBP	4.25	□□□□□ -1.73
BBS4-215	ENST00000569001	MBNL2	Q5VZF2	373 aa	Known RBP	4.25	□□□□□ -1.73
BBS4-215	ENST00000569001	IQSEC1	Q6DN90	963 aa		4.25	□□□□□ -1.73
BBS4-215	ENST00000569001		Q6ZVL8	140 aa		4.25	□□□□□ -1.73
BBS4-215	ENST00000569001	GPRIN1	Q7Z2K8	1008 aa		4.25	□□□□□ -1.73
BBS4-215	ENST00000569001	AMER2	Q8N7J2	671 aa		4.25	□□□□□ -1.73
BBS4-215	ENST00000569001	GPR150	Q8NGU9	434 aa		4.25	□□□□□ -1.73
BBS4-215	ENST00000569001	PROKR1	Q8TCW9	393 aa		4.25	□□□□□ -1.73
BBS4-215	ENST00000569001	CHAC2	Q8WUX2	184 aa		4.25	□□□□□ -1.73
BBS4-215	ENST00000569001	STON2	Q8WXE9	905 aa		4.25	□□□□□ -1.73
BBS4-215	ENST00000569001	NEU1	Q99519	415 aa		4.25	□□□□□ -1.73
BBS4-215	ENST00000569001	WNT8A	Q9H1J5	351 aa		4.25	□□□□□ -1.73
BBS4-215	ENST00000569001	SLK	Q9H2G2	1235 aa	Predicted RBP	4.25	□□□□□ -1.73
BBS4-215	ENST00000569001	LDAH	Q9H6V9	325 aa		4.25	□□□□□ -1.73
BBS4-215	ENST00000569001	C11orf21	Q9P2W6	132 aa		4.25	□□□□□ -1.73
BBS4-215	ENST00000569001	APOBEC2	Q9Y235	224 aa	Known RBP	4.25	□□□□□ -1.73
BBS4-215	ENST00000569001	MAP3K2	Q9Y2U5	619 aa		4.25	□□□□□ -1.73
BBS4-215	ENST00000569001	DMRT1	Q9Y5R6	373 aa		4.25	□□□□□ -1.73
BBS4-215	ENST00000569001	WDR33	Q9C0J8	1336 aa	Known RBP	4.24	□□□□□ -1.73
BBS4-215	ENST00000569001	CENPVL1	A0A0U1RR11	272 aa		4.24	□□□□□ -1.73
BBS4-215	ENST00000569001	UNC119B	A6NIH7	251 aa		4.24	□□□□□ -1.73
BBS4-215	ENST00000569001	RAMP2	O60895	175 aa		4.24	□□□□□ -1.73
BBS4-215	ENST00000569001	ULK1	O75385	1050 aa		4.24	□□□□□ -1.73
BBS4-215	ENST00000569001	PRKD3	O94806	890 aa		4.24	□□□□□ -1.73
BBS4-215	ENST00000569001	OSM	P13725	252 aa		4.24	□□□□□ -1.73
BBS4-215	ENST00000569001	HSP90B1	P14625	803 aa	Known RBP	4.24	□□□□□ -1.73
BBS4-215	ENST00000569001	HSD3B2	P26439	372 aa		4.24	□□□□□ -1.73
BBS4-215	ENST00000569001	CNGA1	P29973	690 aa		4.24	□□□□□ -1.73
BBS4-215	ENST00000569001	SOX5	P35711	763 aa		4.24	□□□□□ -1.73
BBS4-215	ENST00000569001	WNT3A	P56704	352 aa		4.24	□□□□□ -1.73
BBS4-215	ENST00000569001	KRTAP15-1	Q3LI76	137 aa		4.24	□□□□□ -1.73
BBS4-215	ENST00000569001	LAIR1	Q6GTX8	287 aa		4.24	□□□□□ -1.73
BBS4-215	ENST00000569001	KCNV1	Q6PIU1	500 aa		4.24	□□□□□ -1.73
BBS4-215	ENST00000569001	RHOU	Q7L0Q8	258 aa		4.24	□□□□□ -1.73
BBS4-215	ENST00000569001	DOK3	Q7L591	496 aa		4.24	□□□□□ -1.73
BBS4-215	ENST00000569001	MRGPRG	Q86SM5	289 aa		4.24	□□□□□ -1.73
BBS4-215	ENST00000569001	ZNF480	Q8WV37	535 aa		4.24	□□□□□ -1.73
BBS4-215	ENST00000569001	LMBR1	Q8WVP7	490 aa		4.24	□□□□□ -1.73
BBS4-215	ENST00000569001	SLC2A13	Q96QE2	648 aa		4.24	□□□□□ -1.73
BBS4-215	ENST00000569001	POGK	Q9P215	609 aa		4.24	□□□□□ -1.73
BBS4-215	ENST00000569001	FOXN1	O15353	648 aa		4.23	□□□□□ -1.73
BBS4-215	ENST00000569001	NDUFA10	O95299	355 aa		4.23	□□□□□ -1.73
BBS4-215	ENST00000569001	EYA4	O95677	639 aa		4.23	□□□□□ -1.73
BBS4-215	ENST00000569001	ABHD16A	O95870	558 aa		4.23	□□□□□ -1.73
BBS4-215	ENST00000569001	PEX11B	O96011	259 aa		4.23	□□□□□ -1.73
BBS4-215	ENST00000569001	PTGS2	P35354	604 aa		4.23	□□□□□ -1.73
BBS4-215	ENST00000569001	RAP2B	P61225	183 aa		4.23	□□□□□ -1.73
BBS4-215	ENST00000569001	COL10A1	Q03692	680 aa		4.23	□□□□□ -1.73
BBS4-215	ENST00000569001	MST1L	Q2TV78	715 aa		4.23	□□□□□ -1.73
BBS4-215	ENST00000569001	PDCD4	Q53EL6	469 aa	Known RBP	4.23	□□□□□ -1.73
BBS4-215	ENST00000569001	C19orf54	Q5BKX5	351 aa		4.23	□□□□□ -1.73
BBS4-215	ENST00000569001	LRRC55	Q6ZSA7	311 aa		4.23	□□□□□ -1.73
BBS4-215	ENST00000569001	GDF7	Q7Z4P5	450 aa		4.23	□□□□□ -1.73
BBS4-215	ENST00000569001	ULK2	Q8IYT8	1036 aa		4.23	□□□□□ -1.73
BBS4-215	ENST00000569001	TRMT2A	Q8IZ69	625 aa	Known RBP	4.23	□□□□□ -1.73
BBS4-215	ENST00000569001	SYNE4	Q8N205	404 aa		4.23	□□□□□ -1.73
BBS4-215	ENST00000569001	RSAD2	Q8WXG1	361 aa		4.23	□□□□□ -1.73
BBS4-215	ENST00000569001	TFAP2C	Q92754	450 aa		4.23	□□□□□ -1.73
BBS4-215	ENST00000569001	ACAP3	Q96P50	834 aa		4.23	□□□□□ -1.73
BBS4-215	ENST00000569001	PDCD2L	Q9BRP1	358 aa		4.23	□□□□□ -1.73
BBS4-215	ENST00000569001	IFT122	Q9HBG6	1241 aa		4.23	□□□□□ -1.73
BBS4-215	ENST00000569001	FZD1	Q9UP38	647 aa		4.23	□□□□□ -1.73
BBS4-215	ENST00000569001	CHST2	Q9Y4C5	530 aa		4.23	□□□□□ -1.73
BBS4-215	ENST00000569001	RPTOR	Q8N122	1335 aa		4.22	□□□□□ -1.73
BBS4-215	ENST00000569001	TBKBP1	A7MCY6	615 aa		4.22	□□□□□ -1.73
BBS4-215	ENST00000569001	CXorf49	A8MYA2	514 aa	Predicted RBP	4.22	□□□□□ -1.73
BBS4-215	ENST00000569001	TRIM24	O15164	1050 aa		4.22	□□□□□ -1.73
BBS4-215	ENST00000569001	RECQL4	O94761	1208 aa		4.22	□□□□□ -1.73
BBS4-215	ENST00000569001	ITGB1	P05556	798 aa		4.22	□□□□□ -1.73
BBS4-215	ENST00000569001	ZSCAN20	P17040	1043 aa	Predicted RBP	4.22	□□□□□ -1.73
BBS4-215	ENST00000569001	POU3F3	P20264	500 aa	Predicted RBP	4.22	□□□□□ -1.73
BBS4-215	ENST00000569001	FPR1	P21462	350 aa		4.22	□□□□□ -1.73
BBS4-215	ENST00000569001	GPR3	P46089	330 aa		4.22	□□□□□ -1.73
BBS4-215	ENST00000569001	CHN2	P52757	468 aa		4.22	□□□□□ -1.73
BBS4-215	ENST00000569001	MEF2A	Q02078	507 aa	Predicted RBP	4.22	□□□□□ -1.73
BBS4-215	ENST00000569001	PPP3CA	Q08209	521 aa		4.22	□□□□□ -1.73
BBS4-215	ENST00000569001	ADRM1	Q16186	407 aa		4.22	□□□□□ -1.73
BBS4-215	ENST00000569001	MUM1	Q2TAK8	710 aa		4.22	□□□□□ -1.73

Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms