RNA–Protein interactions for RNA: ENST00000568586.5

RAB40C-211, Transcript of RAB40C, member RAS oncogene family, humanhuman

TSL 2

Gene RAB40C, Length 648 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40C-211ENST00000568586 ZP2Q05996 745 aa32.4■■■□□ 2.78
RAB40C-211ENST00000568586 SF3A1Q15459 793 aaKnown RBP32.4■■■□□ 2.78
RAB40C-211ENST00000568586 ADHFE1Q8IWW8 467 aa32.4■■■□□ 2.78
RAB40C-211ENST00000568586 TMEM134Q9H6X4 195 aa32.4■■■□□ 2.78
RAB40C-211ENST00000568586 ARHGAP28Q9P2N2 729 aa32.4■■■□□ 2.78
RAB40C-211ENST00000568586 LONP1P36776 959 aaKnown RBP32.39■■■□□ 2.78
RAB40C-211ENST00000568586 RESTQ13127 1097 aa32.39■■■□□ 2.78
RAB40C-211ENST00000568586 NT5DC1Q5TFE4 455 aa32.39■■■□□ 2.78
RAB40C-211ENST00000568586 CABP7Q86V35 215 aa32.39■■■□□ 2.78
RAB40C-211ENST00000568586 APOL6Q9BWW8 343 aa32.39■■■□□ 2.78
RAB40C-211ENST00000568586 RBM19Q9Y4C8 960 aaKnown RBP32.39■■■□□ 2.78
RAB40C-211ENST00000568586 PHLPP2Q6ZVD8 1323 aa32.38■■■□□ 2.77
RAB40C-211ENST00000568586 K7ERI5 159 aa32.38■■■□□ 2.77
RAB40C-211ENST00000568586 PEX3P56589 373 aa32.38■■■□□ 2.77
RAB40C-211ENST00000568586 MARCH5Q9NX47 278 aa32.38■■■□□ 2.77
RAB40C-211ENST00000568586 USP20Q9Y2K6 914 aa32.38■■■□□ 2.77
RAB40C-211ENST00000568586 CLASP2O75122 1294 aaKnown RBP32.37■■■□□ 2.77
RAB40C-211ENST00000568586 SRGAP2BP0DMP2 458 aa32.37■■■□□ 2.77
RAB40C-211ENST00000568586 DMP1Q13316 513 aaPredicted RBP32.37■■■□□ 2.77
RAB40C-211ENST00000568586 PTPAQ15257 358 aa32.37■■■□□ 2.77
RAB40C-211ENST00000568586 ZRSR1Q15695 479 aaKnown RBP32.37■■■□□ 2.77
RAB40C-211ENST00000568586 EEF1DP3Q658K8 133 aa32.37■■■□□ 2.77
RAB40C-211ENST00000568586 RNF168Q8IYW5 571 aaPredicted RBP32.37■■■□□ 2.77
RAB40C-211ENST00000568586 SPIRE2Q8WWL2 714 aa32.37■■■□□ 2.77
RAB40C-211ENST00000568586 CDK5RAP3Q96JB5 506 aa32.37■■■□□ 2.77
RAB40C-211ENST00000568586 ADPGKQ9BRR6 497 aa32.37■■■□□ 2.77
RAB40C-211ENST00000568586 S1PR5Q9H228 398 aa32.37■■■□□ 2.77
RAB40C-211ENST00000568586 KCNG1Q9UIX4 513 aa32.37■■■□□ 2.77
RAB40C-211ENST00000568586 LILRB3O75022 631 aa32.36■■■□□ 2.77
RAB40C-211ENST00000568586 PLA2G4BP0C869 781 aa32.36■■■□□ 2.77
RAB40C-211ENST00000568586 HOXB8P17481 243 aaPredicted RBP32.36■■■□□ 2.77
RAB40C-211ENST00000568586 UBA7P41226 1012 aa32.36■■■□□ 2.77
RAB40C-211ENST00000568586 GRIN1Q05586 938 aa32.36■■■□□ 2.77
RAB40C-211ENST00000568586 GRIK3Q13003 919 aa32.36■■■□□ 2.77
RAB40C-211ENST00000568586 DCAF4L1Q3SXM0 396 aa32.36■■■□□ 2.77
RAB40C-211ENST00000568586 ANKRD54Q6NXT1 300 aa32.36■■■□□ 2.77
RAB40C-211ENST00000568586 SUSD6Q92537 303 aa32.36■■■□□ 2.77
RAB40C-211ENST00000568586 PARP2Q9UGN5 583 aa32.36■■■□□ 2.77
RAB40C-211ENST00000568586 MTMR6Q9Y217 621 aa32.36■■■□□ 2.77
RAB40C-211ENST00000568586 TNFSF13BQ9Y275 285 aa32.36■■■□□ 2.77
RAB40C-211ENST00000568586 HCFC2Q9Y5Z7 792 aa32.36■■■□□ 2.77
RAB40C-211ENST00000568586 CCDC169A6NNP5 214 aa32.35■■■□□ 2.77
RAB40C-211ENST00000568586 PTPN14Q15678 1187 aa32.35■■■□□ 2.77
RAB40C-211ENST00000568586 ATF7IP2Q5U623 682 aa32.35■■■□□ 2.77
RAB40C-211ENST00000568586 SYCE2Q6PIF2 218 aa32.35■■■□□ 2.77
RAB40C-211ENST00000568586 TAS1R3Q7RTX0 852 aa32.35■■■□□ 2.77
RAB40C-211ENST00000568586 KCNN1Q92952 543 aa32.35■■■□□ 2.77
RAB40C-211ENST00000568586 PLIN2Q99541 437 aa32.35■■■□□ 2.77
RAB40C-211ENST00000568586 PTPRHQ9HD43 1115 aa32.35■■■□□ 2.77
RAB40C-211ENST00000568586 USP15Q9Y4E8 981 aaPredicted RBP32.35■■■□□ 2.77
RAB40C-211ENST00000568586 GTF3C3Q9Y5Q9 886 aa32.35■■■□□ 2.77
RAB40C-211ENST00000568586 MORC2Q9Y6X9 1032 aaPredicted RBP32.35■■■□□ 2.77
RAB40C-211ENST00000568586 ARSHQ5FYA8 562 aa32.34■■■□□ 2.77
RAB40C-211ENST00000568586 LRRC15Q8TF66 581 aa32.34■■■□□ 2.77
RAB40C-211ENST00000568586 AUTS2Q8WXX7 1259 aa32.34■■■□□ 2.77
RAB40C-211ENST00000568586 CASP10Q92851 521 aa32.34■■■□□ 2.77
RAB40C-211ENST00000568586 KHSRPQ92945 711 aaKnown RBP eCLIP32.34■■■□□ 2.77
RAB40C-211ENST00000568586 CALML4Q96GE6 196 aa32.34■■■□□ 2.77
RAB40C-211ENST00000568586 ACO2Q99798 780 aaKnown RBP32.34■■■□□ 2.77
RAB40C-211ENST00000568586 KMT5AQ9NQR1 393 aa32.34■■■□□ 2.77
RAB40C-211ENST00000568586 SNTG2Q9NY99 539 aa32.34■■■□□ 2.77
RAB40C-211ENST00000568586 KLK14Q9P0G3 267 aa32.34■■■□□ 2.77
RAB40C-211ENST00000568586 CLIC4Q9Y696 253 aa32.34■■■□□ 2.77
RAB40C-211ENST00000568586 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP32.33■■■□□ 2.77
RAB40C-211ENST00000568586 NR1I2O75469 434 aa32.33■■■□□ 2.77
RAB40C-211ENST00000568586 SOD2P04179 222 aa32.33■■■□□ 2.77
RAB40C-211ENST00000568586 PLS3P13797 630 aa32.33■■■□□ 2.77
RAB40C-211ENST00000568586 LIG1P18858 919 aa32.33■■■□□ 2.77
RAB40C-211ENST00000568586 OR1G1P47890 313 aa32.33■■■□□ 2.77
RAB40C-211ENST00000568586 TMEM132AQ24JP5 1023 aa32.33■■■□□ 2.77
RAB40C-211ENST00000568586 POP1Q99575 1024 aaKnown RBP32.33■■■□□ 2.77
RAB40C-211ENST00000568586 CCSER1Q9C0I3 900 aa32.33■■■□□ 2.77
RAB40C-211ENST00000568586 PRG3Q9Y2Y8 225 aaPredicted RBP32.33■■■□□ 2.77
RAB40C-211ENST00000568586 TDRD15B5MCY1 1934 aaKnown RBP32.32■■■□□ 2.76
RAB40C-211ENST00000568586 PI4K2BG5E9Z4 385 aa32.32■■■□□ 2.76
RAB40C-211ENST00000568586 PTGESO14684 152 aa32.32■■■□□ 2.76
RAB40C-211ENST00000568586 RECQL4O94761 1208 aa32.32■■■□□ 2.76
RAB40C-211ENST00000568586 APBB1IPQ7Z5R6 666 aaPredicted RBP32.32■■■□□ 2.76
RAB40C-211ENST00000568586 SLC22A17Q8WUG5 538 aa32.32■■■□□ 2.76
RAB40C-211ENST00000568586 HERC2P3Q9BVR0 1158 aa32.32■■■□□ 2.76
RAB40C-211ENST00000568586 COLEC11Q9BWP8 271 aa32.32■■■□□ 2.76
RAB40C-211ENST00000568586 BLOC1S4Q9NUP1 217 aa32.32■■■□□ 2.76
RAB40C-211ENST00000568586 SFI1A8K8P3 1242 aa32.31■■■□□ 2.76
RAB40C-211ENST00000568586 SSBP05455 408 aaKnown RBP eCLIP32.31■■■□□ 2.76
RAB40C-211ENST00000568586 SSTR3P32745 418 aaPredicted RBP32.31■■■□□ 2.76
RAB40C-211ENST00000568586 NAB2Q15742 525 aa32.31■■■□□ 2.76
RAB40C-211ENST00000568586 RPS6KC1Q96S38 1066 aa32.31■■■□□ 2.76
RAB40C-211ENST00000568586 MRPL4Q9BYD3 311 aaKnown RBP32.31■■■□□ 2.76
RAB40C-211ENST00000568586 ZSCAN16Q9H4T2 348 aaPredicted RBP32.31■■■□□ 2.76
RAB40C-211ENST00000568586 STX6O43752 255 aa32.3■■■□□ 2.76
RAB40C-211ENST00000568586 PROZP22891 400 aa32.3■■■□□ 2.76
RAB40C-211ENST00000568586 TUSC3Q13454 348 aa32.3■■■□□ 2.76
RAB40C-211ENST00000568586 LLGL2Q6P1M3 1020 aa32.3■■■□□ 2.76
RAB40C-211ENST00000568586 GPR65Q8IYL9 337 aa32.3■■■□□ 2.76
RAB40C-211ENST00000568586 TMEM161BQ8NDZ6 487 aa32.3■■■□□ 2.76
RAB40C-211ENST00000568586 C1QTNF1Q9BXJ1 281 aa32.3■■■□□ 2.76
RAB40C-211ENST00000568586 EPHX3Q9H6B9 360 aa32.3■■■□□ 2.76
RAB40C-211ENST00000568586 CHST7Q9NS84 486 aa32.3■■■□□ 2.76
RAB40C-211ENST00000568586 FBXO2Q9UK22 296 aaPredicted RBP32.3■■■□□ 2.76
RAB40C-211ENST00000568586 ODF2LQ9ULJ1 636 aa32.3■■■□□ 2.76
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms