RNA–Protein interactions for RNA: ENST00000568569.1

GTF3C1-209, Transcript of general transcription factor IIIC subunit 1, humanhuman

TSL 5

Gene GTF3C1, Length 540 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C1-209ENST00000568569 CACNA1IQ9P0X4 2223 aa13.16□□□□□ -0.3
GTF3C1-209ENST00000568569 KANSL1LA0AUZ9 987 aa13.16□□□□□ -0.3
GTF3C1-209ENST00000568569 EML1O00423 815 aa13.16□□□□□ -0.3
GTF3C1-209ENST00000568569 ASAP2O43150 1006 aa13.16□□□□□ -0.3
GTF3C1-209ENST00000568569 LAMTOR5O43504 91 aa13.16□□□□□ -0.3
GTF3C1-209ENST00000568569 TSPAN1O60635 241 aa13.16□□□□□ -0.3
GTF3C1-209ENST00000568569 LRRN2O75325 713 aa13.16□□□□□ -0.3
GTF3C1-209ENST00000568569 ZMYND10O75800 440 aa13.16□□□□□ -0.3
GTF3C1-209ENST00000568569 GPC5P78333 572 aa13.16□□□□□ -0.3
GTF3C1-209ENST00000568569 PRKCQQ04759 706 aa13.16□□□□□ -0.3
GTF3C1-209ENST00000568569 PPP2R5CQ13362 524 aa13.16□□□□□ -0.3
GTF3C1-209ENST00000568569 SNW1Q13573 536 aaKnown RBP13.16□□□□□ -0.3
GTF3C1-209ENST00000568569 EMC2Q15006 297 aa13.16□□□□□ -0.3
GTF3C1-209ENST00000568569 LILRA6Q6PI73 481 aa13.16□□□□□ -0.3
GTF3C1-209ENST00000568569 BLOC1S2Q6QNY1 142 aa13.16□□□□□ -0.3
GTF3C1-209ENST00000568569 MTSS1LQ765P7 747 aa13.16□□□□□ -0.3
GTF3C1-209ENST00000568569 FERMT3Q86UX7 667 aa13.16□□□□□ -0.3
GTF3C1-209ENST00000568569 GLYCTKQ8IVS8 523 aa13.16□□□□□ -0.3
GTF3C1-209ENST00000568569 GPR161Q8N6U8 529 aaKnown RBP13.16□□□□□ -0.3
GTF3C1-209ENST00000568569 ZNF579Q8NAF0 562 aaKnown RBP13.16□□□□□ -0.3
GTF3C1-209ENST00000568569 ST13P5Q8NFI4 369 aaPredicted RBP13.16□□□□□ -0.3
GTF3C1-209ENST00000568569 FGF14Q92915 247 aa13.16□□□□□ -0.3
GTF3C1-209ENST00000568569 B3GALT6Q96L58 329 aa13.16□□□□□ -0.3
GTF3C1-209ENST00000568569 YTHDC1Q96MU7 727 aaKnown RBP13.16□□□□□ -0.3
GTF3C1-209ENST00000568569 JAKMIP1Q96N16 626 aaKnown RBP13.16□□□□□ -0.3
GTF3C1-209ENST00000568569 GPR62Q9BZJ7 368 aa13.16□□□□□ -0.3
GTF3C1-209ENST00000568569 TRIM6Q9C030 488 aaPredicted RBP13.16□□□□□ -0.3
GTF3C1-209ENST00000568569 RNF39Q9H2S5 420 aa13.16□□□□□ -0.3
GTF3C1-209ENST00000568569 BMP2KQ9NSY1 1161 aaPredicted RBP13.16□□□□□ -0.3
GTF3C1-209ENST00000568569 SPATA6Q9NWH7 488 aaPredicted RBP13.16□□□□□ -0.3
GTF3C1-209ENST00000568569 ADAM28Q9UKQ2 775 aa13.16□□□□□ -0.3
GTF3C1-209ENST00000568569 CDH7Q9ULB5 785 aa13.16□□□□□ -0.3
GTF3C1-209ENST00000568569 HES2Q9Y543 173 aa13.16□□□□□ -0.3
GTF3C1-209ENST00000568569 PCDHGA2Q9Y5H1 932 aa13.16□□□□□ -0.3
GTF3C1-209ENST00000568569 WDR81Q562E7 1941 aa13.15□□□□□ -0.3
GTF3C1-209ENST00000568569 P4HBP07237 508 aaKnown RBP13.15□□□□□ -0.3
GTF3C1-209ENST00000568569 YWHABP31946 246 aaKnown RBP13.15□□□□□ -0.3
GTF3C1-209ENST00000568569 MLF2Q15773 248 aaPredicted RBP13.15□□□□□ -0.3
GTF3C1-209ENST00000568569 VARS2Q5ST30 1063 aaKnown RBP13.15□□□□□ -0.3
GTF3C1-209ENST00000568569 LIN9Q5TKA1 542 aa13.15□□□□□ -0.3
GTF3C1-209ENST00000568569 PARM1Q6UWI2 310 aa13.15□□□□□ -0.3
GTF3C1-209ENST00000568569 GRASPQ7Z6J2 395 aaPredicted RBP13.15□□□□□ -0.3
GTF3C1-209ENST00000568569 C4orf19Q8IY42 314 aa13.15□□□□□ -0.3
GTF3C1-209ENST00000568569 TRIM22Q8IYM9 498 aa13.15□□□□□ -0.3
GTF3C1-209ENST00000568569 BLIDQ8IZY5 108 aa13.15□□□□□ -0.3
GTF3C1-209ENST00000568569 SECISBP2LQ93073 1101 aaKnown RBP13.15□□□□□ -0.3
GTF3C1-209ENST00000568569 CNTNAP3BQ96NU0 1288 aa13.15□□□□□ -0.3
GTF3C1-209ENST00000568569 RPP25Q9BUL9 199 aaKnown RBP13.15□□□□□ -0.3
GTF3C1-209ENST00000568569 DDX23Q9BUQ8 820 aaKnown RBP13.15□□□□□ -0.3
GTF3C1-209ENST00000568569 APOL6Q9BWW8 343 aa13.15□□□□□ -0.3
GTF3C1-209ENST00000568569 AGXT2Q9BYV1 514 aa13.15□□□□□ -0.3
GTF3C1-209ENST00000568569 CNTNAP3Q9BZ76 1288 aa13.15□□□□□ -0.3
GTF3C1-209ENST00000568569 OSBPL6Q9BZF3 934 aa13.15□□□□□ -0.3
GTF3C1-209ENST00000568569 CSRNP2Q9H175 543 aa13.15□□□□□ -0.3
GTF3C1-209ENST00000568569 SLKQ9H2G2 1235 aaPredicted RBP13.15□□□□□ -0.3
GTF3C1-209ENST00000568569 MIOSQ9NXC5 875 aa13.15□□□□□ -0.3
GTF3C1-209ENST00000568569 WRAP73Q9P2S5 460 aaPredicted RBP13.15□□□□□ -0.3
GTF3C1-209ENST00000568569 VAV3Q9UKW4 847 aa13.15□□□□□ -0.3
GTF3C1-209ENST00000568569 SF3B1O75533 1304 aaKnown RBP eCLIP13.14□□□□□ -0.315e-6■■■■■ 86.9
GTF3C1-209ENST00000568569 M0R2N6 131 aa13.14□□□□□ -0.31
GTF3C1-209ENST00000568569 SLC37A4O43826 429 aa13.14□□□□□ -0.31
GTF3C1-209ENST00000568569 HNRNPA1P09651 372 aaKnown RBP eCLIP13.14□□□□□ -0.31
GTF3C1-209ENST00000568569 RPL17P18621 184 aaKnown RBP13.14□□□□□ -0.31
GTF3C1-209ENST00000568569 MAGEA9P43362 315 aa13.14□□□□□ -0.31
GTF3C1-209ENST00000568569 PTENP60484 403 aa13.14□□□□□ -0.31
GTF3C1-209ENST00000568569 PFKPQ01813 784 aa13.14□□□□□ -0.31
GTF3C1-209ENST00000568569 GRIK3Q13003 919 aa13.14□□□□□ -0.31
GTF3C1-209ENST00000568569 MXD4Q14582 209 aaPredicted RBP13.14□□□□□ -0.31
GTF3C1-209ENST00000568569 UBXN2BQ14CS0 331 aa13.14□□□□□ -0.31
GTF3C1-209ENST00000568569 GALNT17Q6IS24 598 aa13.14□□□□□ -0.31
GTF3C1-209ENST00000568569 RSPO2Q6UXX9 243 aaPredicted RBP13.14□□□□□ -0.31
GTF3C1-209ENST00000568569 OTUD6AQ7L8S5 288 aa13.14□□□□□ -0.31
GTF3C1-209ENST00000568569 DAGLBQ8NCG7 672 aa13.14□□□□□ -0.31
GTF3C1-209ENST00000568569 ATRIPQ8WXE1 791 aa13.14□□□□□ -0.31
GTF3C1-209ENST00000568569 CPB2Q96IY4 423 aa13.14□□□□□ -0.31
GTF3C1-209ENST00000568569 FAM20AQ96MK3 541 aa13.14□□□□□ -0.31
GTF3C1-209ENST00000568569 MTRQ99707 1265 aa13.14□□□□□ -0.31
GTF3C1-209ENST00000568569 LXNQ9BS40 222 aa13.14□□□□□ -0.31
GTF3C1-209ENST00000568569 NXF3Q9H4D5 531 aaKnown RBP13.14□□□□□ -0.31
GTF3C1-209ENST00000568569 NCOA5Q9HCD5 579 aaKnown RBP13.14□□□□□ -0.31
GTF3C1-209ENST00000568569 KCNMB3Q9NPA1 279 aa13.14□□□□□ -0.31
GTF3C1-209ENST00000568569 FBXW11Q9UKB1 542 aa13.14□□□□□ -0.31
GTF3C1-209ENST00000568569 ZFHX4Q86UP3 3567 aa13.14□□□□□ -0.31
GTF3C1-209ENST00000568569 ZMYM2Q9UBW7 1377 aa13.13□□□□□ -0.31
GTF3C1-209ENST00000568569 INO80B-WBP1J3KQ70 363 aa13.13□□□□□ -0.31
GTF3C1-209ENST00000568569 TADA2AO75478 443 aa13.13□□□□□ -0.31
GTF3C1-209ENST00000568569 C8AP07357 584 aa13.13□□□□□ -0.31
GTF3C1-209ENST00000568569 PDIA3P30101 505 aaKnown RBP13.13□□□□□ -0.31
GTF3C1-209ENST00000568569 HOXA9P31269 272 aa13.13□□□□□ -0.31
GTF3C1-209ENST00000568569 CCT2P78371 535 aaKnown RBP13.13□□□□□ -0.31
GTF3C1-209ENST00000568569 LMNB2Q03252 620 aa13.13□□□□□ -0.31
GTF3C1-209ENST00000568569 CSTF1Q05048 431 aaKnown RBP13.13□□□□□ -0.31
GTF3C1-209ENST00000568569 TFDP1Q14186 410 aa13.13□□□□□ -0.31
GTF3C1-209ENST00000568569 INF2Q27J81 1249 aa13.13□□□□□ -0.31
GTF3C1-209ENST00000568569 SLC44A4Q53GD3 710 aa13.13□□□□□ -0.31
GTF3C1-209ENST00000568569 XKR9Q5GH70 373 aa13.13□□□□□ -0.31
GTF3C1-209ENST00000568569 PPM1LQ5SGD2 360 aa13.13□□□□□ -0.31
GTF3C1-209ENST00000568569 KRT25Q7Z3Z0 450 aa13.13□□□□□ -0.31
GTF3C1-209ENST00000568569 IFNLR1Q8IU57 520 aaPredicted RBP13.13□□□□□ -0.31
GTF3C1-209ENST00000568569 FAM177A1Q8N128 213 aaPredicted RBP13.13□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms