RNA–Protein interactions for RNA: ENST00000568373.5

SMPD3-211, Transcript of sphingomyelin phosphodiesterase 3, humanhuman

TSL 1 (best) BASIC

Gene SMPD3, Length 2,073 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD3-211ENST00000568373 HELQQ8TDG4 1101 aa19.59■□□□□ 0.73
SMPD3-211ENST00000568373 SHC3Q92529 594 aa19.59■□□□□ 0.73
SMPD3-211ENST00000568373 NT5C1BQ96P26 610 aa19.59■□□□□ 0.73
SMPD3-211ENST00000568373 UBXN6Q9BZV1 441 aa19.59■□□□□ 0.73
SMPD3-211ENST00000568373 MROH8Q9H579 483 aa19.59■□□□□ 0.73
SMPD3-211ENST00000568373 SUGCTQ9HAC7 445 aa19.59■□□□□ 0.73
SMPD3-211ENST00000568373 UTP3Q9NQZ2 479 aaKnown RBP eCLIP19.59■□□□□ 0.73
SMPD3-211ENST00000568373 RBM12Q9NTZ6 932 aaKnown RBP19.59■□□□□ 0.73
SMPD3-211ENST00000568373 TAS2R14Q9NYV8 317 aa19.59■□□□□ 0.73
SMPD3-211ENST00000568373 K7ERI5 159 aa19.58■□□□□ 0.73
SMPD3-211ENST00000568373 MATR3P43243 847 aaKnown RBP eCLIP19.58■□□□□ 0.73
SMPD3-211ENST00000568373 MAP9Q49MG5 647 aa19.58■□□□□ 0.73
SMPD3-211ENST00000568373 EAPPQ56P03 285 aaPredicted RBP19.58■□□□□ 0.73
SMPD3-211ENST00000568373 SLC35G2Q8TBE7 412 aa19.58■□□□□ 0.73
SMPD3-211ENST00000568373 RUBCNQ92622 972 aa19.58■□□□□ 0.73
SMPD3-211ENST00000568373 FAM167AQ96KS9 214 aa19.58■□□□□ 0.73
SMPD3-211ENST00000568373 LRRC1Q9BTT6 524 aa19.58■□□□□ 0.73
SMPD3-211ENST00000568373 AZI2Q9H6S1 392 aa19.58■□□□□ 0.73
SMPD3-211ENST00000568373 ANKRD62A6NC57 917 aa19.58■□□□□ 0.72
SMPD3-211ENST00000568373 KCNK3O14649 394 aa19.58■□□□□ 0.72
SMPD3-211ENST00000568373 MAFO75444 373 aaPredicted RBP19.58■□□□□ 0.72
SMPD3-211ENST00000568373 ABCB4P21439 1286 aa19.58■□□□□ 0.72
SMPD3-211ENST00000568373 GJA5P36382 358 aa19.58■□□□□ 0.72
SMPD3-211ENST00000568373 USP8P40818 1118 aa19.58■□□□□ 0.72
SMPD3-211ENST00000568373 SNAPC2Q13487 334 aa19.58■□□□□ 0.72
SMPD3-211ENST00000568373 PRPF4BQ13523 1007 aaKnown RBP19.58■□□□□ 0.72
SMPD3-211ENST00000568373 PEX26Q7Z412 305 aa19.58■□□□□ 0.72
SMPD3-211ENST00000568373 EPS8L1Q8TE68 723 aa19.58■□□□□ 0.72
SMPD3-211ENST00000568373 PSPC1Q8WXF1 523 aaKnown RBP19.58■□□□□ 0.72
SMPD3-211ENST00000568373 GPR20Q99678 358 aa19.58■□□□□ 0.72
SMPD3-211ENST00000568373 TAF1DQ9H5J8 278 aaPredicted RBP19.58■□□□□ 0.72
SMPD3-211ENST00000568373 AGO2Q9UKV8 859 aaKnown RBP19.58■□□□□ 0.72
SMPD3-211ENST00000568373 PPME1Q9Y570 386 aa19.58■□□□□ 0.72
SMPD3-211ENST00000568373 MCM3APO60318 1980 aa19.57■□□□□ 0.72
SMPD3-211ENST00000568373 GLTPD2A6NH11 291 aa19.57■□□□□ 0.72
SMPD3-211ENST00000568373 ZMYND10O75800 440 aa19.57■□□□□ 0.72
SMPD3-211ENST00000568373 CLDN10P78369 228 aa19.57■□□□□ 0.72
SMPD3-211ENST00000568373 PSMD6Q15008 389 aa19.57■□□□□ 0.72
SMPD3-211ENST00000568373 CELF3Q5SZQ8 465 aaKnown RBP19.57■□□□□ 0.72
SMPD3-211ENST00000568373 SLFN12LQ6IEE8 588 aa19.57■□□□□ 0.72
SMPD3-211ENST00000568373 C15orf39Q6ZRI6 1047 aa19.57■□□□□ 0.72
SMPD3-211ENST00000568373 DAAM2Q86T65 1068 aa19.57■□□□□ 0.72
SMPD3-211ENST00000568373 RPUSD2Q8IZ73 545 aaKnown RBP19.57■□□□□ 0.72
SMPD3-211ENST00000568373 MSL3Q8N5Y2 521 aaKnown RBP19.57■□□□□ 0.72
SMPD3-211ENST00000568373 PBKQ96KB5 322 aa19.57■□□□□ 0.72
SMPD3-211ENST00000568373 TMEM134Q9H6X4 195 aa19.57■□□□□ 0.72
SMPD3-211ENST00000568373 OSGEPQ9NPF4 335 aa19.57■□□□□ 0.72
SMPD3-211ENST00000568373 ST7Q9NRC1 585 aa19.57■□□□□ 0.72
SMPD3-211ENST00000568373 SUCLA2Q9P2R7 463 aaPredicted RBP19.57■□□□□ 0.72
SMPD3-211ENST00000568373 NOCTQ9UK39 431 aaKnown RBP19.57■□□□□ 0.72
SMPD3-211ENST00000568373 ZNFX1Q9P2E3 1918 aaKnown RBP19.57■□□□□ 0.72
SMPD3-211ENST00000568373 SGPL1O95470 568 aa19.56■□□□□ 0.72
SMPD3-211ENST00000568373 ERVK-9P63128 1117 aa19.56■□□□□ 0.72
SMPD3-211ENST00000568373 CAPSQ13938 189 aa19.56■□□□□ 0.72
SMPD3-211ENST00000568373 SMC1AQ14683 1233 aaKnown RBP19.56■□□□□ 0.72
SMPD3-211ENST00000568373 HSDL1Q3SXM5 330 aa19.56■□□□□ 0.72
SMPD3-211ENST00000568373 WDR78Q5VTH9 848 aa19.56■□□□□ 0.72
SMPD3-211ENST00000568373 HDAC7Q8WUI4 952 aa19.56■□□□□ 0.72
SMPD3-211ENST00000568373 THAP2Q9H0W7 228 aa19.56■□□□□ 0.72
SMPD3-211ENST00000568373 ISCUQ9H1K1 167 aa19.56■□□□□ 0.72
SMPD3-211ENST00000568373 STXBP5LQ9Y2K9 1186 aa19.56■□□□□ 0.72
SMPD3-211ENST00000568373 SCN4AP35499 1836 aa19.56■□□□□ 0.72
SMPD3-211ENST00000568373 NOP56O00567 594 aaKnown RBP19.56■□□□□ 0.72
SMPD3-211ENST00000568373 CYP26A1O43174 497 aa19.56■□□□□ 0.72
SMPD3-211ENST00000568373 LGR5O75473 907 aa19.56■□□□□ 0.72
SMPD3-211ENST00000568373 NLRP11P59045 1033 aaKnown RBP19.56■□□□□ 0.72
SMPD3-211ENST00000568373 CASP8Q14790 479 aa19.56■□□□□ 0.72
SMPD3-211ENST00000568373 CCNI2Q6ZMN8 369 aaPredicted RBP19.56■□□□□ 0.72
SMPD3-211ENST00000568373 NOP9Q86U38 636 aaKnown RBP19.56■□□□□ 0.72
SMPD3-211ENST00000568373 NT5DC3Q86UY8 548 aa19.56■□□□□ 0.72
SMPD3-211ENST00000568373 MORC4Q8TE76 937 aa19.56■□□□□ 0.72
SMPD3-211ENST00000568373 BBXQ8WY36 941 aaPredicted RBP19.56■□□□□ 0.72
SMPD3-211ENST00000568373 GLG1Q92896 1179 aa19.56■□□□□ 0.72
SMPD3-211ENST00000568373 ARHGEF26Q96DR7 871 aa19.56■□□□□ 0.72
SMPD3-211ENST00000568373 HAPLN2Q9GZV7 340 aa19.56■□□□□ 0.72
SMPD3-211ENST00000568373 ADCY3O60266 1144 aa19.55■□□□□ 0.72
SMPD3-211ENST00000568373 BUB1BO60566 1050 aaPredicted RBP19.55■□□□□ 0.72
SMPD3-211ENST00000568373 ZC3H11AO75152 810 aaKnown RBP eCLIP19.55■□□□□ 0.72
SMPD3-211ENST00000568373 ZBTB48P10074 688 aaPredicted RBP19.55■□□□□ 0.72
SMPD3-211ENST00000568373 GABPB1Q06547 395 aaPredicted RBP19.55■□□□□ 0.72
SMPD3-211ENST00000568373 GLE1Q53GS7 698 aaKnown RBP19.55■□□□□ 0.72
SMPD3-211ENST00000568373 C8orf74Q6P047 294 aa19.55■□□□□ 0.72
SMPD3-211ENST00000568373 SLC47A2Q86VL8 602 aa19.55■□□□□ 0.72
SMPD3-211ENST00000568373 FBXO16Q8IX29 292 aaPredicted RBP19.55■□□□□ 0.72
SMPD3-211ENST00000568373 SHCBP1Q8NEM2 672 aa19.55■□□□□ 0.72
SMPD3-211ENST00000568373 ZNF516Q92618 1163 aa19.55■□□□□ 0.72
SMPD3-211ENST00000568373 FNBP1Q96RU3 617 aa19.55■□□□□ 0.72
SMPD3-211ENST00000568373 TARS2Q9BW92 718 aaKnown RBP19.55■□□□□ 0.72
SMPD3-211ENST00000568373 DMGDHQ9UI17 866 aaKnown RBP19.55■□□□□ 0.72
SMPD3-211ENST00000568373 ZC3H4Q9UPT8 1303 aaKnown RBP19.55■□□□□ 0.72
SMPD3-211ENST00000568373 LOC102724159A0A0B4J2E5 919 aa19.55■□□□□ 0.72
SMPD3-211ENST00000568373 FTLP02792 175 aaPredicted RBP19.55■□□□□ 0.72
SMPD3-211ENST00000568373 CHRNB2P17787 502 aa19.55■□□□□ 0.72
SMPD3-211ENST00000568373 ACOT2P49753 483 aa19.55■□□□□ 0.72
SMPD3-211ENST00000568373 DRP2Q13474 957 aa19.55■□□□□ 0.72
SMPD3-211ENST00000568373 PWP2Q15269 919 aaKnown RBP19.55■□□□□ 0.72
SMPD3-211ENST00000568373 PTPROQ16827 1216 aa19.55■□□□□ 0.72
SMPD3-211ENST00000568373 CCDC62Q6P9F0 684 aa19.55■□□□□ 0.72
SMPD3-211ENST00000568373 CRELD2Q6UXH1 353 aaPredicted RBP19.55■□□□□ 0.72
SMPD3-211ENST00000568373 PLPPR4Q7Z2D5 763 aa19.55■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms