RNA–Protein interactions for RNA: ENST00000568290.1

ATXN3-250, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 671 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-250ENST00000568290 BORCS6Q96GS4 357 aa8.21□□□□□ -1.1
ATXN3-250ENST00000568290 CCDC114Q96M63 670 aa8.21□□□□□ -1.1
ATXN3-250ENST00000568290 NT5C1BQ96P26 610 aa8.21□□□□□ -1.1
ATXN3-250ENST00000568290 TRERF1Q96PN7 1200 aa8.21□□□□□ -1.1
ATXN3-250ENST00000568290 VCPKMTQ9H867 229 aa8.21□□□□□ -1.1
ATXN3-250ENST00000568290 MRPL47Q9HD33 250 aaKnown RBP8.21□□□□□ -1.1
ATXN3-250ENST00000568290 SIX2Q9NPC8 291 aa8.21□□□□□ -1.1
ATXN3-250ENST00000568290 WBP1LQ9NX94 342 aa8.21□□□□□ -1.1
ATXN3-250ENST00000568290 WHRNQ9P202 907 aa8.21□□□□□ -1.1
ATXN3-250ENST00000568290 GREB1LQ9C091 1923 aaPredicted RBP8.21□□□□□ -1.1
ATXN3-250ENST00000568290 IGLV3-22A0A075B6J6 115 aa8.2□□□□□ -1.1
ATXN3-250ENST00000568290 NPHP3-ACAD11A0A0J9YXS1 232 aa8.2□□□□□ -1.1
ATXN3-250ENST00000568290 C5orf60A6NFR6 353 aa8.2□□□□□ -1.1
ATXN3-250ENST00000568290 WDR64B1ANS9 1081 aa8.2□□□□□ -1.1
ATXN3-250ENST00000568290 CLIC2O15247 247 aa8.2□□□□□ -1.1
ATXN3-250ENST00000568290 DAPK3O43293 454 aa8.2□□□□□ -1.1
ATXN3-250ENST00000568290 TGFB1I1O43294 461 aa8.2□□□□□ -1.1
ATXN3-250ENST00000568290 ECE2O60344 883 aa8.2□□□□□ -1.1
ATXN3-250ENST00000568290 BUB1BO60566 1050 aaPredicted RBP8.2□□□□□ -1.1
ATXN3-250ENST00000568290 LDHAP00338 332 aaKnown RBP8.2□□□□□ -1.1
ATXN3-250ENST00000568290 GH2P01242 217 aa8.2□□□□□ -1.1
ATXN3-250ENST00000568290 ICAM1P05362 532 aa8.2□□□□□ -1.1
ATXN3-250ENST00000568290 HPDP32754 393 aaPredicted RBP8.2□□□□□ -1.1
ATXN3-250ENST00000568290 GCGRP47871 477 aa8.2□□□□□ -1.1
ATXN3-250ENST00000568290 ATP1A2P50993 1020 aa8.2□□□□□ -1.1
ATXN3-250ENST00000568290 CYP2J2P51589 502 aa8.2□□□□□ -1.1
ATXN3-250ENST00000568290 AP3M2P53677 418 aa8.2□□□□□ -1.1
ATXN3-250ENST00000568290 PSMC5P62195 406 aa8.2□□□□□ -1.1
ATXN3-250ENST00000568290 GTF2BQ00403 316 aa8.2□□□□□ -1.1
ATXN3-250ENST00000568290 GHRHRQ02643 423 aa8.2□□□□□ -1.1
ATXN3-250ENST00000568290 CYP4A11Q02928 519 aa8.2□□□□□ -1.1
ATXN3-250ENST00000568290 CENPCQ03188 943 aa8.2□□□□□ -1.1
ATXN3-250ENST00000568290 ACTN3Q08043 901 aaPredicted RBP8.2□□□□□ -1.1
ATXN3-250ENST00000568290 ZNF844Q08AG5 666 aa8.2□□□□□ -1.1
ATXN3-250ENST00000568290 DMP1Q13316 513 aaPredicted RBP8.2□□□□□ -1.1
ATXN3-250ENST00000568290 TNFAIP1Q13829 316 aa8.2□□□□□ -1.1
ATXN3-250ENST00000568290 DLGAP5Q15398 846 aa8.2□□□□□ -1.1
ATXN3-250ENST00000568290 PPP1R7Q15435 360 aa8.2□□□□□ -1.1
ATXN3-250ENST00000568290 DACT2Q5SW24 774 aa8.2□□□□□ -1.1
ATXN3-250ENST00000568290 PPP1R21Q6ZMI0 780 aa8.2□□□□□ -1.1
ATXN3-250ENST00000568290 NLRX1Q86UT6 975 aa8.2□□□□□ -1.1
ATXN3-250ENST00000568290 JAMLQ86YT9 394 aa8.2□□□□□ -1.1
ATXN3-250ENST00000568290 DHX37Q8IY37 1157 aaKnown RBP8.2□□□□□ -1.1
ATXN3-250ENST00000568290 C4orf19Q8IY42 314 aa8.2□□□□□ -1.1
ATXN3-250ENST00000568290 EXOC8Q8IYI6 725 aa8.2□□□□□ -1.1
ATXN3-250ENST00000568290 RTKN2Q8IZC4 609 aa8.2□□□□□ -1.1
ATXN3-250ENST00000568290 CERS5Q8N5B7 392 aa8.2□□□□□ -1.1
ATXN3-250ENST00000568290 CCDC89Q8N998 374 aa8.2□□□□□ -1.1
ATXN3-250ENST00000568290 C12orf50Q8NA57 414 aaPredicted RBP8.2□□□□□ -1.1
ATXN3-250ENST00000568290 MCPH1Q8NEM0 835 aa8.2□□□□□ -1.1
ATXN3-250ENST00000568290 GADD45GIP1Q8TAE8 222 aaPredicted RBP8.2□□□□□ -1.1
ATXN3-250ENST00000568290 IPO4Q8TEX9 1081 aaKnown RBP8.2□□□□□ -1.1
ATXN3-250ENST00000568290 DYDC1Q8WWB3 177 aa8.2□□□□□ -1.1
ATXN3-250ENST00000568290 ATP6V0A1Q93050 837 aa8.2□□□□□ -1.1
ATXN3-250ENST00000568290 ZNF622Q969S3 477 aaKnown RBP eCLIP8.2□□□□□ -1.1
ATXN3-250ENST00000568290 VCPIP1Q96JH7 1222 aa8.2□□□□□ -1.1
ATXN3-250ENST00000568290 TTC25Q96NG3 672 aa8.2□□□□□ -1.1
ATXN3-250ENST00000568290 SERPINB12Q96P63 405 aa8.2□□□□□ -1.1
ATXN3-250ENST00000568290 GPR101Q96P66 508 aaPredicted RBP8.2□□□□□ -1.1
ATXN3-250ENST00000568290 ZSWIM1Q9BR11 485 aa8.2□□□□□ -1.1
ATXN3-250ENST00000568290 LXNQ9BS40 222 aa8.2□□□□□ -1.1
ATXN3-250ENST00000568290 RUSC1Q9BVN2 902 aa8.2□□□□□ -1.1
ATXN3-250ENST00000568290 PACSIN1Q9BY11 444 aa8.2□□□□□ -1.1
ATXN3-250ENST00000568290 PHACTR1Q9C0D0 580 aa8.2□□□□□ -1.1
ATXN3-250ENST00000568290 DDX47Q9H0S4 455 aaKnown RBP8.2□□□□□ -1.1
ATXN3-250ENST00000568290 CCDC134Q9H6E4 229 aa8.2□□□□□ -1.1
ATXN3-250ENST00000568290 TMEM8AQ9HCN3 771 aa8.2□□□□□ -1.1
ATXN3-250ENST00000568290 UBE2TQ9NPD8 197 aaPredicted RBP8.2□□□□□ -1.1
ATXN3-250ENST00000568290 SENP1Q9P0U3 644 aa8.2□□□□□ -1.1
ATXN3-250ENST00000568290 AMACRQ9UHK6 382 aa8.2□□□□□ -1.1
ATXN3-250ENST00000568290 NOVA2Q9UNW9 492 aaKnown RBP8.2□□□□□ -1.1
ATXN3-250ENST00000568290 ATP8A1Q9Y2Q0 1164 aa8.2□□□□□ -1.1
ATXN3-250ENST00000568290 SAMM50Q9Y512 469 aa8.2□□□□□ -1.1
ATXN3-250ENST00000568290 ALG6Q9Y672 507 aa8.2□□□□□ -1.1
ATXN3-250ENST00000568290 SCINQ9Y6U3 715 aa8.2□□□□□ -1.1
ATXN3-250ENST00000568290 CAPN7Q9Y6W3 813 aa8.2□□□□□ -1.1
ATXN3-250ENST00000568290 MYH4Q9Y623 1939 aa8.19□□□□□ -1.1
ATXN3-250ENST00000568290 RASGRF2O14827 1237 aa8.19□□□□□ -1.1
ATXN3-250ENST00000568290 PLSCR1O15162 318 aa8.19□□□□□ -1.1
ATXN3-250ENST00000568290 WDR46O15213 610 aaKnown RBP8.19□□□□□ -1.1
ATXN3-250ENST00000568290 TTI1O43156 1089 aa8.19□□□□□ -1.1
ATXN3-250ENST00000568290 ZBED4O75132 1171 aa8.19□□□□□ -1.1
ATXN3-250ENST00000568290 HIP1RO75146 1068 aa8.19□□□□□ -1.1
ATXN3-250ENST00000568290 ATP5HO75947 161 aa8.19□□□□□ -1.1
ATXN3-250ENST00000568290 FTLP02792 175 aaPredicted RBP8.19□□□□□ -1.1
ATXN3-250ENST00000568290 GARTP22102 1010 aa8.19□□□□□ -1.1
ATXN3-250ENST00000568290 LIG3P49916 1009 aa8.19□□□□□ -1.1
ATXN3-250ENST00000568290 HSD17B4P51659 736 aa8.19□□□□□ -1.1
ATXN3-250ENST00000568290 CASP5P51878 434 aa8.19□□□□□ -1.1
ATXN3-250ENST00000568290 RTP1P59025 263 aa8.19□□□□□ -1.1
ATXN3-250ENST00000568290 MAGOHP61326 146 aaKnown RBP8.19□□□□□ -1.1
ATXN3-250ENST00000568290 PSMC6P62333 389 aa8.19□□□□□ -1.1
ATXN3-250ENST00000568290 GCNT1Q02742 428 aa8.19□□□□□ -1.1
ATXN3-250ENST00000568290 MAP2K1Q02750 393 aaPredicted RBP8.19□□□□□ -1.1
ATXN3-250ENST00000568290 TAP1Q03518 808 aa8.19□□□□□ -1.1
ATXN3-250ENST00000568290 TCP10Q12799 353 aa8.19□□□□□ -1.1
ATXN3-250ENST00000568290 CTTNQ14247 550 aaKnown RBP8.19□□□□□ -1.1
ATXN3-250ENST00000568290 CYP1B1Q16678 543 aa8.19□□□□□ -1.1
ATXN3-250ENST00000568290 ARHGAP44Q17R89 818 aa8.19□□□□□ -1.1
ATXN3-250ENST00000568290 LACTB2Q53H82 288 aaPredicted RBP8.19□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms